RNA–Protein interactions for RNA: ENST00000530642.1

FOXRED1-210, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 3,045 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-210ENST00000530642 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
FOXRED1-210ENST00000530642 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
FOXRED1-210ENST00000530642 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
FOXRED1-210ENST00000530642 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
FOXRED1-210ENST00000530642 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
FOXRED1-210ENST00000530642 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
FOXRED1-210ENST00000530642 SENP3Q9H4L4 574 aaPredicted RBP12.97□□□□□ -0.33
FOXRED1-210ENST00000530642 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.33
FOXRED1-210ENST00000530642 TOPBP1Q92547 1522 aa12.94□□□□□ -0.34
FOXRED1-210ENST00000530642 CUX2O14529 1486 aa12.94□□□□□ -0.34
FOXRED1-210ENST00000530642 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
FOXRED1-210ENST00000530642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
FOXRED1-210ENST00000530642 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
FOXRED1-210ENST00000530642 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
FOXRED1-210ENST00000530642 CLIP1P30622 1438 aa12.91□□□□□ -0.34
FOXRED1-210ENST00000530642 IGF1RP08069 1367 aa12.91□□□□□ -0.34
FOXRED1-210ENST00000530642 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
FOXRED1-210ENST00000530642 URB2Q14146 1524 aaKnown RBP12.9□□□□□ -0.34
FOXRED1-210ENST00000530642 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
FOXRED1-210ENST00000530642 RAD54L2Q9Y4B4 1467 aa12.87□□□□□ -0.35
FOXRED1-210ENST00000530642 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
FOXRED1-210ENST00000530642 DIEXFQ68CQ4 756 aaKnown RBP12.85□□□□□ -0.35
FOXRED1-210ENST00000530642 CARMIL1Q5VZK9 1371 aa12.83□□□□□ -0.36
FOXRED1-210ENST00000530642 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
FOXRED1-210ENST00000530642 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
FOXRED1-210ENST00000530642 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
FOXRED1-210ENST00000530642 P3H3Q8IVL6 736 aa12.79□□□□□ -0.36
FOXRED1-210ENST00000530642 FBLN2P98095 1184 aa12.78□□□□□ -0.36
FOXRED1-210ENST00000530642 HOMEZQ8IX15 550 aa12.78□□□□□ -0.36
FOXRED1-210ENST00000530642 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
FOXRED1-210ENST00000530642 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
FOXRED1-210ENST00000530642 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
FOXRED1-210ENST00000530642 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
FOXRED1-210ENST00000530642 MRC2Q9UBG0 1479 aa12.75□□□□□ -0.37
FOXRED1-210ENST00000530642 CUL7Q14999 1698 aa12.75□□□□□ -0.37
FOXRED1-210ENST00000530642 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
FOXRED1-210ENST00000530642 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
FOXRED1-210ENST00000530642 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
FOXRED1-210ENST00000530642 ARHGAP35Q9NRY4 1499 aa12.73□□□□□ -0.37
FOXRED1-210ENST00000530642 EIF5BO60841 1220 aaKnown RBP12.73□□□□□ -0.37
FOXRED1-210ENST00000530642 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
FOXRED1-210ENST00000530642 PODXL2Q9NZ53 605 aa12.72□□□□□ -0.37
FOXRED1-210ENST00000530642 HNRNPUL2Q1KMD3 747 aaKnown RBP12.7□□□□□ -0.38
FOXRED1-210ENST00000530642 WDR62O43379 1518 aa12.68□□□□□ -0.38
FOXRED1-210ENST00000530642 TSHZ2Q9NRE2 1034 aa12.67□□□□□ -0.38
FOXRED1-210ENST00000530642 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
FOXRED1-210ENST00000530642 ERCC6Q03468 1493 aa12.64□□□□□ -0.39
FOXRED1-210ENST00000530642 CTTNBP2Q8WZ74 1663 aa12.63□□□□□ -0.39
FOXRED1-210ENST00000530642 ITGAEP38570 1179 aa12.63□□□□□ -0.39
FOXRED1-210ENST00000530642 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
FOXRED1-210ENST00000530642 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.392e-10■■■■■ 41.8
FOXRED1-210ENST00000530642 PBRM1Q86U86 1689 aa12.62□□□□□ -0.39
FOXRED1-210ENST00000530642 ARID3CA6NKF2 412 aa12.62□□□□□ -0.39
FOXRED1-210ENST00000530642 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
FOXRED1-210ENST00000530642 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
FOXRED1-210ENST00000530642 KANK4Q5T7N3 995 aaPredicted RBP12.59□□□□□ -0.39
FOXRED1-210ENST00000530642 GRIN2BQ13224 1484 aa12.58□□□□□ -0.39
FOXRED1-210ENST00000530642 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
FOXRED1-210ENST00000530642 ZNF608Q9ULD9 1512 aaPredicted RBP12.58□□□□□ -0.4
FOXRED1-210ENST00000530642 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
FOXRED1-210ENST00000530642 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
FOXRED1-210ENST00000530642 MAP3K1Q13233 1512 aa12.56□□□□□ -0.4
FOXRED1-210ENST00000530642 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
FOXRED1-210ENST00000530642 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
FOXRED1-210ENST00000530642 FHOD3Q2V2M9 1422 aa12.55□□□□□ -0.4
FOXRED1-210ENST00000530642 TIAM1Q13009 1591 aa12.53□□□□□ -0.4
FOXRED1-210ENST00000530642 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
FOXRED1-210ENST00000530642 EIF4G3O43432 1585 aaKnown RBP12.52□□□□□ -0.41
FOXRED1-210ENST00000530642 MIER1Q8N108 512 aa12.52□□□□□ -0.41
FOXRED1-210ENST00000530642 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
FOXRED1-210ENST00000530642 PCF11O94913 1555 aaKnown RBP12.51□□□□□ -0.41
FOXRED1-210ENST00000530642 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
FOXRED1-210ENST00000530642 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
FOXRED1-210ENST00000530642 FYCO1Q9BQS8 1478 aa12.49□□□□□ -0.41
FOXRED1-210ENST00000530642 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
FOXRED1-210ENST00000530642 LRRC9Q6ZRR7 1453 aa12.48□□□□□ -0.41
FOXRED1-210ENST00000530642 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
FOXRED1-210ENST00000530642 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
FOXRED1-210ENST00000530642 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
FOXRED1-210ENST00000530642 MAGI1Q96QZ7 1491 aaPredicted RBP12.45□□□□□ -0.42
FOXRED1-210ENST00000530642 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
FOXRED1-210ENST00000530642 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
FOXRED1-210ENST00000530642 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
FOXRED1-210ENST00000530642 KIAA0586Q9BVV6 1533 aa12.42□□□□□ -0.42
FOXRED1-210ENST00000530642 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
FOXRED1-210ENST00000530642 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
FOXRED1-210ENST00000530642 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
FOXRED1-210ENST00000530642 SYNJ2O15056 1496 aa12.41□□□□□ -0.42
FOXRED1-210ENST00000530642 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
FOXRED1-210ENST00000530642 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
FOXRED1-210ENST00000530642 LRRIQ1Q96JM4 1722 aa12.38□□□□□ -0.43
FOXRED1-210ENST00000530642 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
FOXRED1-210ENST00000530642 CEP170Q5SW79 1584 aa12.36□□□□□ -0.43
FOXRED1-210ENST00000530642 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
FOXRED1-210ENST00000530642 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
FOXRED1-210ENST00000530642 NUP160Q12769 1436 aa12.34□□□□□ -0.43
FOXRED1-210ENST00000530642 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.43
FOXRED1-210ENST00000530642 CCDC18Q5T9S5 1454 aa12.33□□□□□ -0.44
FOXRED1-210ENST00000530642 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
FOXRED1-210ENST00000530642 MSH5O43196 834 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms