RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
USP35-206ENST00000530535 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
USP35-206ENST00000530535 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
USP35-206ENST00000530535 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
USP35-206ENST00000530535 RANGAP1P46060 587 aaPredicted RBP23.36■■□□□ 1.33
USP35-206ENST00000530535 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
USP35-206ENST00000530535 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
USP35-206ENST00000530535 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
USP35-206ENST00000530535 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
USP35-206ENST00000530535 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
USP35-206ENST00000530535 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
USP35-206ENST00000530535 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
USP35-206ENST00000530535 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
USP35-206ENST00000530535 CTTNBP2Q8WZ74 1663 aa23.21■■□□□ 1.31
USP35-206ENST00000530535 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
USP35-206ENST00000530535 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
USP35-206ENST00000530535 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
USP35-206ENST00000530535 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
USP35-206ENST00000530535 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
USP35-206ENST00000530535 APLP2Q06481 763 aa23.16■■□□□ 1.3
USP35-206ENST00000530535 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
USP35-206ENST00000530535 FBLN2P98095 1184 aa23.12■■□□□ 1.29
USP35-206ENST00000530535 GTF3C3Q9Y5Q9 886 aa23.08■■□□□ 1.29
USP35-206ENST00000530535 EFCAB5A4FU69 1503 aa23.06■■□□□ 1.28
USP35-206ENST00000530535 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
USP35-206ENST00000530535 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
USP35-206ENST00000530535 KIAA0586Q9BVV6 1533 aa23.04■■□□□ 1.28
USP35-206ENST00000530535 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
USP35-206ENST00000530535 NUP160Q12769 1436 aa22.99■■□□□ 1.27
USP35-206ENST00000530535 KANK4Q5T7N3 995 aaPredicted RBP22.99■■□□□ 1.27
USP35-206ENST00000530535 SAMD9Q5K651 1589 aa22.98■■□□□ 1.27
USP35-206ENST00000530535 FHOD3Q2V2M9 1422 aa22.98■■□□□ 1.27
USP35-206ENST00000530535 RRBP1Q9P2E9 1410 aaKnown RBP22.98■■□□□ 1.27
USP35-206ENST00000530535 DHX57Q6P158 1386 aaKnown RBP22.97■■□□□ 1.27
USP35-206ENST00000530535 MIER1Q8N108 512 aa22.96■■□□□ 1.27
USP35-206ENST00000530535 CLSPNQ9HAW4 1339 aa22.96■■□□□ 1.27
USP35-206ENST00000530535 UGGT2Q9NYU1 1516 aa22.94■■□□□ 1.26
USP35-206ENST00000530535 CHD1O14646 1710 aa22.91■■□□□ 1.26
USP35-206ENST00000530535 FMN1Q68DA7 1419 aa22.89■■□□□ 1.25
USP35-206ENST00000530535 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
USP35-206ENST00000530535 DISP1Q96F81 1524 aa22.84■■□□□ 1.25
USP35-206ENST00000530535 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.25
USP35-206ENST00000530535 CASKIN1Q8WXD9 1431 aa22.82■■□□□ 1.24
USP35-206ENST00000530535 PCF11O94913 1555 aaKnown RBP22.81■■□□□ 1.24
USP35-206ENST00000530535 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
USP35-206ENST00000530535 ATP1B4Q9UN42 357 aaPredicted RBP22.8■■□□□ 1.24
USP35-206ENST00000530535 CCNB3Q8WWL7 1395 aa22.8■■□□□ 1.24
USP35-206ENST00000530535 FYCO1Q9BQS8 1478 aa22.79■■□□□ 1.24
USP35-206ENST00000530535 CARMIL2Q6F5E8 1435 aa22.76■■□□□ 1.23
USP35-206ENST00000530535 MAP3K1Q13233 1512 aa22.76■■□□□ 1.23
USP35-206ENST00000530535 TIAM1Q13009 1591 aa22.74■■□□□ 1.23
USP35-206ENST00000530535 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
USP35-206ENST00000530535 LRRIQ1Q96JM4 1722 aa22.67■■□□□ 1.22
USP35-206ENST00000530535 CLASP1Q7Z460 1538 aa22.66■■□□□ 1.22
USP35-206ENST00000530535 SHROOM2Q13796 1616 aa22.66■■□□□ 1.22
USP35-206ENST00000530535 CFAP43Q8NDM7 1665 aa22.65■■□□□ 1.22
USP35-206ENST00000530535 LRRC9Q6ZRR7 1453 aa22.64■■□□□ 1.22
USP35-206ENST00000530535 MAPKBP1O60336 1514 aa22.62■■□□□ 1.21
USP35-206ENST00000530535 HECW1Q76N89 1606 aa22.62■■□□□ 1.21
USP35-206ENST00000530535 RAB3GAP2Q9H2M9 1393 aa22.61■■□□□ 1.21
USP35-206ENST00000530535 CCDC18Q5T9S5 1454 aa22.59■■□□□ 1.21
USP35-206ENST00000530535 OSCARQ8IYS5 282 aa22.58■■□□□ 1.2
USP35-206ENST00000530535 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
USP35-206ENST00000530535 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
USP35-206ENST00000530535 PTPRGP23470 1445 aa22.56■■□□□ 1.2
USP35-206ENST00000530535 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
USP35-206ENST00000530535 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
USP35-206ENST00000530535 ITGAEP38570 1179 aa22.54■■□□□ 1.2
USP35-206ENST00000530535 NUP153P49790 1475 aaKnown RBP22.54■■□□□ 1.2
USP35-206ENST00000530535 ERCC6L2Q5T890 1561 aa22.53■■□□□ 1.2
USP35-206ENST00000530535 MTUS2Q5JR59 1369 aa22.53■■□□□ 1.2
USP35-206ENST00000530535 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
USP35-206ENST00000530535 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
USP35-206ENST00000530535 CDK13Q14004 1512 aaKnown RBP22.5■■□□□ 1.19
USP35-206ENST00000530535 ABCA8O94911 1581 aa22.49■■□□□ 1.19
USP35-206ENST00000530535 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
USP35-206ENST00000530535 EHBP1L1Q8N3D4 1523 aa22.45■■□□□ 1.18
USP35-206ENST00000530535 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
USP35-206ENST00000530535 UACAQ9BZF9 1416 aa22.42■■□□□ 1.18
USP35-206ENST00000530535 NCOA2Q15596 1464 aa22.38■■□□□ 1.17
USP35-206ENST00000530535 SUPT6HQ7KZ85 1726 aaKnown RBP22.38■■□□□ 1.17
USP35-206ENST00000530535 ATP10BO94823 1461 aa22.37■■□□□ 1.17
USP35-206ENST00000530535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.17
USP35-206ENST00000530535 FAM50AQ14320 339 aaKnown RBP22.34■■□□□ 1.17
USP35-206ENST00000530535 ARHGEF11O15085 1522 aa22.33■■□□□ 1.16
USP35-206ENST00000530535 ABCC2Q92887 1545 aa22.32■■□□□ 1.16
USP35-206ENST00000530535 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
USP35-206ENST00000530535 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
USP35-206ENST00000530535 SIN3AQ96ST3 1273 aa22.3■■□□□ 1.16
USP35-206ENST00000530535 MYOM3Q5VTT5 1437 aa22.29■■□□□ 1.16
USP35-206ENST00000530535 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
USP35-206ENST00000530535 FGD6Q6ZV73 1430 aa22.28■■□□□ 1.16
USP35-206ENST00000530535 SUPT16HQ9Y5B9 1047 aaKnown RBP22.27■■□□□ 1.16
USP35-206ENST00000530535 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
USP35-206ENST00000530535 KCNH8Q96L42 1107 aa22.22■■□□□ 1.15
USP35-206ENST00000530535 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.14
USP35-206ENST00000530535 KDM5BQ9UGL1 1544 aa22.2■■□□□ 1.14
USP35-206ENST00000530535 KIF14Q15058 1648 aa22.18■■□□□ 1.14
USP35-206ENST00000530535 MIA2Q96PC5 1412 aa22.18■■□□□ 1.14
USP35-206ENST00000530535 PTPRKQ15262 1439 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms