RNA–Protein interactions for RNA: ENST00000530200.1

MTMR9-204, Transcript of myotubularin related protein 9, humanhuman

TSL 1 (best)

Gene MTMR9, Length 3,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR9-204ENST00000530200 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
MTMR9-204ENST00000530200 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
MTMR9-204ENST00000530200 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
MTMR9-204ENST00000530200 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
MTMR9-204ENST00000530200 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
MTMR9-204ENST00000530200 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
MTMR9-204ENST00000530200 DNMBPQ6XZF7 1577 aa15.42■□□□□ 0.06
MTMR9-204ENST00000530200 RAB3GAP2Q9H2M9 1393 aa15.41■□□□□ 0.06
MTMR9-204ENST00000530200 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
MTMR9-204ENST00000530200 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
MTMR9-204ENST00000530200 CLSPNQ9HAW4 1339 aa15.39■□□□□ 0.05
MTMR9-204ENST00000530200 TRIM52Q96A61 297 aa15.39■□□□□ 0.05
MTMR9-204ENST00000530200 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
MTMR9-204ENST00000530200 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
MTMR9-204ENST00000530200 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
MTMR9-204ENST00000530200 RRBP1Q9P2E9 1410 aaKnown RBP15.37■□□□□ 0.05
MTMR9-204ENST00000530200 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
MTMR9-204ENST00000530200 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
MTMR9-204ENST00000530200 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
MTMR9-204ENST00000530200 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
MTMR9-204ENST00000530200 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
MTMR9-204ENST00000530200 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
MTMR9-204ENST00000530200 RRP7BPQ9NSQ0 103 aa15.33■□□□□ 0.04
MTMR9-204ENST00000530200 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.045e-7■■■■□ 19.7
MTMR9-204ENST00000530200 TIAM1Q13009 1591 aa15.31■□□□□ 0.04
MTMR9-204ENST00000530200 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
MTMR9-204ENST00000530200 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
MTMR9-204ENST00000530200 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
MTMR9-204ENST00000530200 DDX10Q13206 875 aaKnown RBP15.27■□□□□ 0.04
MTMR9-204ENST00000530200 PCF11O94913 1555 aaKnown RBP15.26■□□□□ 0.03
MTMR9-204ENST00000530200 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
MTMR9-204ENST00000530200 CASKIN1Q8WXD9 1431 aa15.25■□□□□ 0.03
MTMR9-204ENST00000530200 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
MTMR9-204ENST00000530200 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
MTMR9-204ENST00000530200 CDK11AQ9UQ88 783 aaPredicted RBP15.21■□□□□ 0.03
MTMR9-204ENST00000530200 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
MTMR9-204ENST00000530200 CUL7Q14999 1698 aa15.2■□□□□ 0.02
MTMR9-204ENST00000530200 FGD6Q6ZV73 1430 aa15.17■□□□□ 0.02
MTMR9-204ENST00000530200 MAP3K1Q13233 1512 aa15.16■□□□□ 0.02
MTMR9-204ENST00000530200 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
MTMR9-204ENST00000530200 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
MTMR9-204ENST00000530200 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
MTMR9-204ENST00000530200 NCOA2Q15596 1464 aa15.12■□□□□ 0.01
MTMR9-204ENST00000530200 POLR3GLQ9BT43 218 aa15.11■□□□□ 0.01
MTMR9-204ENST00000530200 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
MTMR9-204ENST00000530200 ANP32CO43423 234 aa15.11■□□□□ 0.01
MTMR9-204ENST00000530200 FOXD1Q16676 465 aa15.11■□□□□ 0.01
MTMR9-204ENST00000530200 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
MTMR9-204ENST00000530200 ZNF326Q5BKZ1 582 aaKnown RBP15.1■□□□□ 0.01
MTMR9-204ENST00000530200 MYOM3Q5VTT5 1437 aa15.09■□□□□ 0.01
MTMR9-204ENST00000530200 PPP1R15AO75807 674 aaPredicted RBP15.09■□□□□ 0.01
MTMR9-204ENST00000530200 CFDP1Q9UEE9 299 aaPredicted RBP15.09■□□□□ 0.01
MTMR9-204ENST00000530200 CTTNBP2Q8WZ74 1663 aa15.08■□□□□ 0
MTMR9-204ENST00000530200 CCDC18Q5T9S5 1454 aa15.08■□□□□ 0
MTMR9-204ENST00000530200 KCNH8Q96L42 1107 aa15.06■□□□□ 0
MTMR9-204ENST00000530200 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ 0
MTMR9-204ENST00000530200 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
MTMR9-204ENST00000530200 TIMELESSQ9UNS1 1208 aa15.05■□□□□ -0
MTMR9-204ENST00000530200 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ -0
MTMR9-204ENST00000530200 ABCA5Q8WWZ7 1642 aa15.04■□□□□ -0
MTMR9-204ENST00000530200 JPH4Q96JJ6 628 aa15.04■□□□□ -0
MTMR9-204ENST00000530200 PLEKHD1A6NEE1 506 aa15.04■□□□□ -0
MTMR9-204ENST00000530200 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
MTMR9-204ENST00000530200 IFT140Q96RY7 1462 aa15.03■□□□□ -0
MTMR9-204ENST00000530200 CDK13Q14004 1512 aaKnown RBP15.02■□□□□ -0
MTMR9-204ENST00000530200 CFAP43Q8NDM7 1665 aa15.02□□□□□ -0.01
MTMR9-204ENST00000530200 IQGAP2Q13576 1575 aa15.02□□□□□ -0.01
MTMR9-204ENST00000530200 MAPKBP1O60336 1514 aa15.01□□□□□ -0.01
MTMR9-204ENST00000530200 MPHOSPH9Q99550 1183 aa15.01□□□□□ -0.01
MTMR9-204ENST00000530200 PTPRKQ15262 1439 aa15□□□□□ -0.01
MTMR9-204ENST00000530200 BCANQ96GW7 911 aa14.99□□□□□ -0.01
MTMR9-204ENST00000530200 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
MTMR9-204ENST00000530200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.98□□□□□ -0.01
MTMR9-204ENST00000530200 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
MTMR9-204ENST00000530200 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
MTMR9-204ENST00000530200 UACAQ9BZF9 1416 aa14.97□□□□□ -0.01
MTMR9-204ENST00000530200 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
MTMR9-204ENST00000530200 HFM1A2PYH4 1435 aa14.97□□□□□ -0.01
MTMR9-204ENST00000530200 NEFLP07196 543 aa14.97□□□□□ -0.01
MTMR9-204ENST00000530200 NAIPQ13075 1403 aa14.96□□□□□ -0.01
MTMR9-204ENST00000530200 CARMIL2Q6F5E8 1435 aa14.96□□□□□ -0.01
MTMR9-204ENST00000530200 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.01
MTMR9-204ENST00000530200 TSPY4P0CV99 314 aa14.96□□□□□ -0.02
MTMR9-204ENST00000530200 TSPY10P0CW01 314 aa14.96□□□□□ -0.02
MTMR9-204ENST00000530200 EIF4G2P78344 907 aaKnown RBP eCLIP14.95□□□□□ -0.02
MTMR9-204ENST00000530200 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
MTMR9-204ENST00000530200 HECW1Q76N89 1606 aa14.93□□□□□ -0.02
MTMR9-204ENST00000530200 SAMD9Q5K651 1589 aa14.93□□□□□ -0.02
MTMR9-204ENST00000530200 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
MTMR9-204ENST00000530200 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
MTMR9-204ENST00000530200 ADAMTS12P58397 1594 aa14.91□□□□□ -0.02
MTMR9-204ENST00000530200 HSPA5P11021 654 aaKnown RBP14.91□□□□□ -0.02
MTMR9-204ENST00000530200 PTPN23Q9H3S7 1636 aa14.91□□□□□ -0.02
MTMR9-204ENST00000530200 GRIN2AQ12879 1464 aa14.91□□□□□ -0.02
MTMR9-204ENST00000530200 PRG4Q92954 1404 aaPredicted RBP14.91□□□□□ -0.02
MTMR9-204ENST00000530200 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
MTMR9-204ENST00000530200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
MTMR9-204ENST00000530200 KDM2AQ9Y2K7 1162 aa14.89□□□□□ -0.03
MTMR9-204ENST00000530200 THOC2Q8NI27 1593 aaKnown RBP14.89□□□□□ -0.03
MTMR9-204ENST00000530200 MAGI3Q5TCQ9 1506 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms