RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 KIAA0586Q9BVV6 1533 aa22.28■■□□□ 1.16
SMCO4-205ENST00000529714 IQGAP2Q13576 1575 aa22.22■■□□□ 1.15
SMCO4-205ENST00000529714 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
SMCO4-205ENST00000529714 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
SMCO4-205ENST00000529714 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
SMCO4-205ENST00000529714 EHMT2Q96KQ7 1210 aa22.16■■□□□ 1.14
SMCO4-205ENST00000529714 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
SMCO4-205ENST00000529714 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
SMCO4-205ENST00000529714 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
SMCO4-205ENST00000529714 EFCAB5A4FU69 1503 aa22.04■■□□□ 1.12
SMCO4-205ENST00000529714 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
SMCO4-205ENST00000529714 PRG4Q92954 1404 aaPredicted RBP22.03■■□□□ 1.12
SMCO4-205ENST00000529714 CARMIL2Q6F5E8 1435 aa22.02■■□□□ 1.12
SMCO4-205ENST00000529714 DISP1Q96F81 1524 aa22.01■■□□□ 1.11
SMCO4-205ENST00000529714 KIAA0556O60303 1618 aa22■■□□□ 1.11
SMCO4-205ENST00000529714 CEP162Q5TB80 1403 aa21.98■■□□□ 1.11
SMCO4-205ENST00000529714 CLIP1P30622 1438 aa21.97■■□□□ 1.11
SMCO4-205ENST00000529714 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
SMCO4-205ENST00000529714 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
SMCO4-205ENST00000529714 ARHGAP35Q9NRY4 1499 aa21.95■■□□□ 1.1
SMCO4-205ENST00000529714 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
SMCO4-205ENST00000529714 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
SMCO4-205ENST00000529714 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
SMCO4-205ENST00000529714 RANGAP1P46060 587 aaPredicted RBP21.91■■□□□ 1.1
SMCO4-205ENST00000529714 DNAJC5Q9H3Z4 198 aa21.9■■□□□ 1.1
SMCO4-205ENST00000529714 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
SMCO4-205ENST00000529714 ARAP1Q96P48 1450 aa21.84■■□□□ 1.09
SMCO4-205ENST00000529714 PTPRGP23470 1445 aa21.83■■□□□ 1.09
SMCO4-205ENST00000529714 P3H3Q8IVL6 736 aa21.83■■□□□ 1.09
SMCO4-205ENST00000529714 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
SMCO4-205ENST00000529714 ABCA8O94911 1581 aa21.74■■□□□ 1.07
SMCO4-205ENST00000529714 UACAQ9BZF9 1416 aa21.72■■□□□ 1.07
SMCO4-205ENST00000529714 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
SMCO4-205ENST00000529714 RAPGEF6Q8TEU7 1601 aa21.71■■□□□ 1.07
SMCO4-205ENST00000529714 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
SMCO4-205ENST00000529714 PLB1Q6P1J6 1458 aa21.71■■□□□ 1.07
SMCO4-205ENST00000529714 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
SMCO4-205ENST00000529714 ABCC2Q92887 1545 aa21.7■■□□□ 1.06
SMCO4-205ENST00000529714 CASKIN1Q8WXD9 1431 aa21.68■■□□□ 1.06
SMCO4-205ENST00000529714 FYCO1Q9BQS8 1478 aa21.67■■□□□ 1.06
SMCO4-205ENST00000529714 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
SMCO4-205ENST00000529714 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
SMCO4-205ENST00000529714 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
SMCO4-205ENST00000529714 ADCY10Q96PN6 1610 aa21.66■■□□□ 1.06
SMCO4-205ENST00000529714 NUP153P49790 1475 aaKnown RBP21.62■■□□□ 1.05
SMCO4-205ENST00000529714 KDM5BQ9UGL1 1544 aa21.59■■□□□ 1.05
SMCO4-205ENST00000529714 CCDC18Q5T9S5 1454 aa21.57■■□□□ 1.04
SMCO4-205ENST00000529714 EPRSP07814 1512 aaKnown RBP21.55■■□□□ 1.04
SMCO4-205ENST00000529714 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
SMCO4-205ENST00000529714 ZCCHC11Q5TAX3 1644 aaKnown RBP21.54■■□□□ 1.04
SMCO4-205ENST00000529714 ATP10BO94823 1461 aa21.53■■□□□ 1.04
SMCO4-205ENST00000529714 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
SMCO4-205ENST00000529714 MAP3K1Q13233 1512 aa21.5■■□□□ 1.03
SMCO4-205ENST00000529714 NPM1P06748 294 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMCO4-205ENST00000529714 CFAP43Q8NDM7 1665 aa21.49■■□□□ 1.03
SMCO4-205ENST00000529714 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
SMCO4-205ENST00000529714 MAPKBP1O60336 1514 aa21.46■■□□□ 1.03
SMCO4-205ENST00000529714 TIAM1Q13009 1591 aa21.46■■□□□ 1.03
SMCO4-205ENST00000529714 ARID3CA6NKF2 412 aa21.43■■□□□ 1.02
SMCO4-205ENST00000529714 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
SMCO4-205ENST00000529714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-205ENST00000529714 APLP2Q06481 763 aa21.41■■□□□ 1.02
SMCO4-205ENST00000529714 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
SMCO4-205ENST00000529714 ASXL2Q76L83 1435 aa21.39■■□□□ 1.02
SMCO4-205ENST00000529714 WDR7Q9Y4E6 1490 aa21.39■■□□□ 1.01
SMCO4-205ENST00000529714 PLEKHD1A6NEE1 506 aa21.37■■□□□ 1.01
SMCO4-205ENST00000529714 TROQ12816 1431 aaPredicted RBP21.37■■□□□ 1.01
SMCO4-205ENST00000529714 EHBP1L1Q8N3D4 1523 aa21.36■■□□□ 1.01
SMCO4-205ENST00000529714 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
SMCO4-205ENST00000529714 LRRC9Q6ZRR7 1453 aa21.35■■□□□ 1.01
SMCO4-205ENST00000529714 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
SMCO4-205ENST00000529714 KIF14Q15058 1648 aa21.3■■□□□ 1
SMCO4-205ENST00000529714 ABCC10Q5T3U5 1492 aa21.27■■□□□ 1
SMCO4-205ENST00000529714 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
SMCO4-205ENST00000529714 GLI2P10070 1586 aa21.27■□□□□ 0.99
SMCO4-205ENST00000529714 DIP2BQ9P265 1576 aa21.27■□□□□ 0.99
SMCO4-205ENST00000529714 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
SMCO4-205ENST00000529714 ABCA9Q8IUA7 1624 aa21.24■□□□□ 0.99
SMCO4-205ENST00000529714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.22■□□□□ 0.99
SMCO4-205ENST00000529714 KCNH8Q96L42 1107 aa21.21■□□□□ 0.99
SMCO4-205ENST00000529714 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
SMCO4-205ENST00000529714 KIF13AQ9H1H9 1805 aa21.2■□□□□ 0.98
SMCO4-205ENST00000529714 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
SMCO4-205ENST00000529714 MAP3K4Q9Y6R4 1608 aa21.18■□□□□ 0.98
SMCO4-205ENST00000529714 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
SMCO4-205ENST00000529714 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
SMCO4-205ENST00000529714 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
SMCO4-205ENST00000529714 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.97
SMCO4-205ENST00000529714 CDC42BPAQ5VT25 1732 aa21.13■□□□□ 0.97
SMCO4-205ENST00000529714 CCNB3Q8WWL7 1395 aa21.12■□□□□ 0.97
SMCO4-205ENST00000529714 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
SMCO4-205ENST00000529714 CD109Q6YHK3 1445 aa21.12■□□□□ 0.97
SMCO4-205ENST00000529714 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
SMCO4-205ENST00000529714 PLCH2O75038 1416 aa21.11■□□□□ 0.97
SMCO4-205ENST00000529714 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
SMCO4-205ENST00000529714 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
SMCO4-205ENST00000529714 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
SMCO4-205ENST00000529714 PHLDB1Q86UU1 1377 aa21.08■□□□□ 0.96
SMCO4-205ENST00000529714 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
SMCO4-205ENST00000529714 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms