RNA–Protein interactions for RNA: ENST00000529693.1

PUF60-214, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 684 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-214ENST00000529693 KIAA0586Q9BVV6 1533 aa28.79■■■□□ 2.2
PUF60-214ENST00000529693 SHROOM2Q13796 1616 aa28.77■■■□□ 2.2
PUF60-214ENST00000529693 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
PUF60-214ENST00000529693 IQGAP2Q13576 1575 aa28.71■■■□□ 2.19
PUF60-214ENST00000529693 GOLGA3Q08378 1498 aa28.69■■■□□ 2.18
PUF60-214ENST00000529693 RIMBP3CA6NJZ7 1639 aa28.69■■■□□ 2.18
PUF60-214ENST00000529693 RIMBP3BA6NNM3 1639 aa28.69■■■□□ 2.18
PUF60-214ENST00000529693 RIMBP3Q9UFD9 1639 aa28.69■■■□□ 2.18
PUF60-214ENST00000529693 JPH4Q96JJ6 628 aa28.68■■■□□ 2.18
PUF60-214ENST00000529693 ARHGEF11O15085 1522 aa28.68■■■□□ 2.18
PUF60-214ENST00000529693 ERCC6L2Q5T890 1561 aa28.67■■■□□ 2.18
PUF60-214ENST00000529693 PRG4Q92954 1404 aaPredicted RBP28.6■■■□□ 2.17
PUF60-214ENST00000529693 UBTFP17480 764 aaKnown RBP28.57■■■□□ 2.16
PUF60-214ENST00000529693 UGGT2Q9NYU1 1516 aa28.57■■■□□ 2.16
PUF60-214ENST00000529693 DISP1Q96F81 1524 aa28.5■■■□□ 2.15
PUF60-214ENST00000529693 ARAP1Q96P48 1450 aa28.5■■■□□ 2.15
PUF60-214ENST00000529693 LOC105371045A0A1W2PR82 267 aa28.46■■■□□ 2.15
PUF60-214ENST00000529693 KIAA0556O60303 1618 aa28.46■■■□□ 2.15
PUF60-214ENST00000529693 CARMIL2Q6F5E8 1435 aa28.43■■■□□ 2.14
PUF60-214ENST00000529693 SAMD9Q5K651 1589 aa28.41■■■□□ 2.14
PUF60-214ENST00000529693 RANGAP1P46060 587 aaPredicted RBP28.41■■■□□ 2.14
PUF60-214ENST00000529693 TNIKQ9UKE5 1360 aa28.4■■■□□ 2.14
PUF60-214ENST00000529693 CYB5RLQ6IPT4 315 aa28.37■■■□□ 2.13
PUF60-214ENST00000529693 P3H3Q8IVL6 736 aa28.32■■■□□ 2.12
PUF60-214ENST00000529693 EFCAB5A4FU69 1503 aa28.3■■■□□ 2.12
PUF60-214ENST00000529693 PTPRGP23470 1445 aa28.29■■■□□ 2.12
PUF60-214ENST00000529693 TTBK1Q5TCY1 1321 aaPredicted RBP28.28■■■□□ 2.12
PUF60-214ENST00000529693 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
PUF60-214ENST00000529693 FHOD3Q2V2M9 1422 aa28.24■■■□□ 2.11
PUF60-214ENST00000529693 CLIP1P30622 1438 aa28.19■■■□□ 2.1
PUF60-214ENST00000529693 ADCY10Q96PN6 1610 aa28.18■■■□□ 2.1
PUF60-214ENST00000529693 CEP162Q5TB80 1403 aa28.18■■■□□ 2.1
PUF60-214ENST00000529693 ABCA8O94911 1581 aa28.13■■■□□ 2.09
PUF60-214ENST00000529693 PLB1Q6P1J6 1458 aa28.13■■■□□ 2.09
PUF60-214ENST00000529693 UACAQ9BZF9 1416 aa28.12■■■□□ 2.09
PUF60-214ENST00000529693 ABCC2Q92887 1545 aa28.08■■■□□ 2.09
PUF60-214ENST00000529693 UHRF1BP1LA0JNW5 1464 aa28.08■■■□□ 2.09
PUF60-214ENST00000529693 RAPGEF6Q8TEU7 1601 aa28.05■■■□□ 2.08
PUF60-214ENST00000529693 FMN1Q68DA7 1419 aa28.01■■■□□ 2.07
PUF60-214ENST00000529693 KDM5BQ9UGL1 1544 aa27.96■■■□□ 2.07
PUF60-214ENST00000529693 ZCCHC11Q5TAX3 1644 aaKnown RBP27.96■■■□□ 2.07
PUF60-214ENST00000529693 NUP153P49790 1475 aaKnown RBP27.94■■■□□ 2.06
PUF60-214ENST00000529693 PCF11O94913 1555 aaKnown RBP27.92■■■□□ 2.06
PUF60-214ENST00000529693 LRRIQ1Q96JM4 1722 aa27.91■■■□□ 2.06
PUF60-214ENST00000529693 ARID3CA6NKF2 412 aa27.9■■■□□ 2.06
PUF60-214ENST00000529693 NPM1P06748 294 aaKnown RBP eCLIP27.9■■■□□ 2.06
PUF60-214ENST00000529693 ATP10BO94823 1461 aa27.89■■■□□ 2.05
PUF60-214ENST00000529693 HECW1Q76N89 1606 aa27.88■■■□□ 2.05
PUF60-214ENST00000529693 CASKIN1Q8WXD9 1431 aa27.87■■■□□ 2.05
PUF60-214ENST00000529693 MAPKBP1O60336 1514 aa27.86■■■□□ 2.05
PUF60-214ENST00000529693 ATP1B4Q9UN42 357 aaPredicted RBP27.82■■■□□ 2.04
PUF60-214ENST00000529693 FYCO1Q9BQS8 1478 aa27.82■■■□□ 2.04
PUF60-214ENST00000529693 CDK13Q14004 1512 aaKnown RBP27.81■■■□□ 2.04
PUF60-214ENST00000529693 VPS8Q8N3P4 1428 aa27.8■■■□□ 2.04
PUF60-214ENST00000529693 EPRSP07814 1512 aaKnown RBP27.8■■■□□ 2.04
PUF60-214ENST00000529693 ASXL2Q76L83 1435 aa27.79■■■□□ 2.04
PUF60-214ENST00000529693 KIF13AQ9H1H9 1805 aa27.73■■■□□ 2.03
PUF60-214ENST00000529693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.72■■■□□ 2.03
PUF60-214ENST00000529693 HNRNPUL2Q1KMD3 747 aaKnown RBP27.72■■■□□ 2.03
PUF60-214ENST00000529693 WDR7Q9Y4E6 1490 aa27.7■■■□□ 2.02
PUF60-214ENST00000529693 CCDC18Q5T9S5 1454 aa27.69■■■□□ 2.02
PUF60-214ENST00000529693 DIP2BQ9P265 1576 aa27.69■■■□□ 2.02
PUF60-214ENST00000529693 ABCC10Q5T3U5 1492 aa27.67■■■□□ 2.02
PUF60-214ENST00000529693 TRHP20396 242 aaPredicted RBP27.62■■■□□ 2.01
PUF60-214ENST00000529693 CFAP43Q8NDM7 1665 aa27.62■■■□□ 2.01
PUF60-214ENST00000529693 MAGI3Q5TCQ9 1506 aa27.62■■■□□ 2.01
PUF60-214ENST00000529693 PLEKHD1A6NEE1 506 aa27.61■■■□□ 2.01
PUF60-214ENST00000529693 KCNH8Q96L42 1107 aa27.6■■■□□ 2.01
PUF60-214ENST00000529693 GLI2P10070 1586 aa27.59■■■□□ 2.01
PUF60-214ENST00000529693 FAM69CQ0P6D2 419 aa27.58■■■□□ 2.01
PUF60-214ENST00000529693 TIAM1Q13009 1591 aa27.56■■■□□ 2
PUF60-214ENST00000529693 CDK11AQ9UQ88 783 aaPredicted RBP27.55■■■□□ 2
PUF60-214ENST00000529693 TROQ12816 1431 aaPredicted RBP27.54■■■□□ 2
PUF60-214ENST00000529693 TSPOAP1O95153 1857 aa27.52■■■□□ 2
PUF60-214ENST00000529693 KIF14Q15058 1648 aa27.52■■■□□ 2
PUF60-214ENST00000529693 MAP3K4Q9Y6R4 1608 aa27.52■■■□□ 2
PUF60-214ENST00000529693 MAP3K1Q13233 1512 aa27.51■■□□□ 1.99
PUF60-214ENST00000529693 ABCA9Q8IUA7 1624 aa27.5■■□□□ 1.99
PUF60-214ENST00000529693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.47■■□□□ 1.99
PUF60-214ENST00000529693 PPRC1Q5VV67 1664 aaKnown RBP27.46■■□□□ 1.99
PUF60-214ENST00000529693 TTC37Q6PGP7 1564 aa27.46■■□□□ 1.99
PUF60-214ENST00000529693 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
PUF60-214ENST00000529693 EHBP1L1Q8N3D4 1523 aa27.43■■□□□ 1.98
PUF60-214ENST00000529693 KANK4Q5T7N3 995 aaPredicted RBP27.42■■□□□ 1.98
PUF60-214ENST00000529693 LRRC9Q6ZRR7 1453 aa27.42■■□□□ 1.98
PUF60-214ENST00000529693 CD109Q6YHK3 1445 aa27.4■■□□□ 1.98
PUF60-214ENST00000529693 APLP2Q06481 763 aa27.39■■□□□ 1.98
PUF60-214ENST00000529693 MYO5CQ9NQX4 1742 aa27.36■■□□□ 1.97
PUF60-214ENST00000529693 SUPT6HQ7KZ85 1726 aaKnown RBP27.35■■□□□ 1.97
PUF60-214ENST00000529693 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
PUF60-214ENST00000529693 CDC42BPBQ9Y5S2 1711 aa27.3■■□□□ 1.96
PUF60-214ENST00000529693 NCOA2Q15596 1464 aa27.29■■□□□ 1.96
PUF60-214ENST00000529693 PREX2Q70Z35 1606 aa27.27■■□□□ 1.96
PUF60-214ENST00000529693 PLCH2O75038 1416 aa27.27■■□□□ 1.96
PUF60-214ENST00000529693 TEX14Q8IWB6 1497 aa27.25■■□□□ 1.95
PUF60-214ENST00000529693 GPATCH8Q9UKJ3 1502 aaKnown RBP27.24■■□□□ 1.95
PUF60-214ENST00000529693 ARAP3Q8WWN8 1544 aa27.23■■□□□ 1.95
PUF60-214ENST00000529693 CCNB3Q8WWL7 1395 aa27.21■■□□□ 1.95
PUF60-214ENST00000529693 PPARGC1BQ86YN6 1023 aaKnown RBP27.2■■□□□ 1.94
PUF60-214ENST00000529693 ITSN2Q9NZM3 1697 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms