RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 PPP6R1Q9UPN7 881 aa6.58□□□□□ -1.36
CASP4-207ENST00000529565 TIMELESSQ9UNS1 1208 aa6.57□□□□□ -1.36
CASP4-207ENST00000529565 TONSLQ96HA7 1378 aa6.57□□□□□ -1.36
CASP4-207ENST00000529565 ZNF326Q5BKZ1 582 aaKnown RBP6.57□□□□□ -1.36
CASP4-207ENST00000529565 HMGXB3Q12766 1538 aa6.57□□□□□ -1.36
CASP4-207ENST00000529565 VPS8Q8N3P4 1428 aa6.56□□□□□ -1.36
CASP4-207ENST00000529565 TDRD9Q8NDG6 1382 aaKnown RBP6.56□□□□□ -1.36
CASP4-207ENST00000529565 RAPGEF2Q9Y4G8 1499 aa6.55□□□□□ -1.36
CASP4-207ENST00000529565 CARMIL2Q6F5E8 1435 aa6.55□□□□□ -1.36
CASP4-207ENST00000529565 ANP32CO43423 234 aa6.54□□□□□ -1.36
CASP4-207ENST00000529565 ESF1Q9H501 851 aaKnown RBP6.54□□□□□ -1.36
CASP4-207ENST00000529565 CHIC2Q9UKJ5 165 aa6.54□□□□□ -1.36
CASP4-207ENST00000529565 SLC4A1APQ9BWU0 796 aaKnown RBP6.54□□□□□ -1.36
CASP4-207ENST00000529565 BICRAQ9NZM4 1560 aa6.53□□□□□ -1.36
CASP4-207ENST00000529565 FMN1Q68DA7 1419 aa6.53□□□□□ -1.36
CASP4-207ENST00000529565 CFDP1Q9UEE9 299 aaPredicted RBP6.53□□□□□ -1.36
CASP4-207ENST00000529565 CFTRP13569 1480 aa6.52□□□□□ -1.37
CASP4-207ENST00000529565 KCNH8Q96L42 1107 aa6.51□□□□□ -1.37
CASP4-207ENST00000529565 CCNB3Q8WWL7 1395 aa6.5□□□□□ -1.37
CASP4-207ENST00000529565 CNGB1Q14028 1251 aaPredicted RBP6.5□□□□□ -1.37
CASP4-207ENST00000529565 CC2D2AQ9P2K1 1620 aa6.5□□□□□ -1.37
CASP4-207ENST00000529565 FGD5Q6ZNL6 1462 aa6.5□□□□□ -1.37
CASP4-207ENST00000529565 CLSPNQ9HAW4 1339 aa6.49□□□□□ -1.37
CASP4-207ENST00000529565 RRP7BPQ9NSQ0 103 aa6.49□□□□□ -1.37
CASP4-207ENST00000529565 PPP4R3CPQ6ZMV5 832 aa6.48□□□□□ -1.37
CASP4-207ENST00000529565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.48□□□□□ -1.37
CASP4-207ENST00000529565 ERICH6Q7L0X2 663 aa6.48□□□□□ -1.37
CASP4-207ENST00000529565 PIAS4Q8N2W9 510 aaPredicted RBP6.48□□□□□ -1.37
CASP4-207ENST00000529565 ARHGAP35Q9NRY4 1499 aa6.48□□□□□ -1.37
CASP4-207ENST00000529565 STAG3Q9UJ98 1225 aa6.47□□□□□ -1.37
CASP4-207ENST00000529565 GAPVD1Q14C86 1478 aa6.47□□□□□ -1.37
CASP4-207ENST00000529565 BCANQ96GW7 911 aa6.47□□□□□ -1.37
CASP4-207ENST00000529565 PEG3Q9GZU2 1588 aa6.46□□□□□ -1.37
CASP4-207ENST00000529565 IGF1RP08069 1367 aa6.46□□□□□ -1.38
CASP4-207ENST00000529565 CHGAP10645 457 aaKnown RBP6.46□□□□□ -1.38
CASP4-207ENST00000529565 RUSC2Q8N2Y8 1516 aa6.46□□□□□ -1.38
CASP4-207ENST00000529565 SCAF1Q9H7N4 1312 aaKnown RBP6.44□□□□□ -1.38
CASP4-207ENST00000529565 JPH4Q96JJ6 628 aa6.44□□□□□ -1.38
CASP4-207ENST00000529565 FHOD3Q2V2M9 1422 aa6.43□□□□□ -1.38
CASP4-207ENST00000529565 MRC2Q9UBG0 1479 aa6.43□□□□□ -1.38
CASP4-207ENST00000529565 RAD54L2Q9Y4B4 1467 aa6.43□□□□□ -1.38
CASP4-207ENST00000529565 UNC13AQ9UPW8 1703 aa6.43□□□□□ -1.38
CASP4-207ENST00000529565 TOP2BQ02880 1626 aa6.43□□□□□ -1.38
CASP4-207ENST00000529565 KANK4Q5T7N3 995 aaPredicted RBP6.42□□□□□ -1.38
CASP4-207ENST00000529565 ERICH3Q5RHP9 1530 aa6.42□□□□□ -1.38
CASP4-207ENST00000529565 CCDC18Q5T9S5 1454 aa6.42□□□□□ -1.38
CASP4-207ENST00000529565 SETD5Q9C0A6 1442 aa6.42□□□□□ -1.38
CASP4-207ENST00000529565 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
CASP4-207ENST00000529565 KIF21BO75037 1637 aa6.42□□□□□ -1.38
CASP4-207ENST00000529565 NEFMP07197 916 aa6.41□□□□□ -1.38
CASP4-207ENST00000529565 SYNJ1O43426 1573 aa6.41□□□□□ -1.38
CASP4-207ENST00000529565 GRIN2BQ13224 1484 aa6.41□□□□□ -1.38
CASP4-207ENST00000529565 LAMC3Q9Y6N6 1575 aa6.41□□□□□ -1.38
CASP4-207ENST00000529565 IFT140Q96RY7 1462 aa6.41□□□□□ -1.38
CASP4-207ENST00000529565 TOPBP1Q92547 1522 aa6.4□□□□□ -1.38
CASP4-207ENST00000529565 TAOK2Q9UL54 1235 aa6.4□□□□□ -1.38
CASP4-207ENST00000529565 RSPH4AQ5TD94 716 aa6.4□□□□□ -1.38
CASP4-207ENST00000529565 EFCAB2Q5VUJ9 269 aa6.4□□□□□ -1.38
CASP4-207ENST00000529565 NESP48681 1621 aa6.4□□□□□ -1.39
CASP4-207ENST00000529565 DNMBPQ6XZF7 1577 aa6.4□□□□□ -1.39
CASP4-207ENST00000529565 KDM2AQ9Y2K7 1162 aa6.4□□□□□ -1.39
CASP4-207ENST00000529565 KANK1Q14678 1352 aa6.39□□□□□ -1.39
CASP4-207ENST00000529565 DDX10Q13206 875 aaKnown RBP6.39□□□□□ -1.39
CASP4-207ENST00000529565 CUX1P39880 1505 aa6.39□□□□□ -1.39
CASP4-207ENST00000529565 PTPRGP23470 1445 aa6.38□□□□□ -1.39
CASP4-207ENST00000529565 ANKRD30AQ9BXX3 1397 aa6.38□□□□□ -1.39
CASP4-207ENST00000529565 AQRO60306 1485 aaKnown RBP eCLIP6.37□□□□□ -1.39
CASP4-207ENST00000529565 POLA1P09884 1462 aaPredicted RBP6.37□□□□□ -1.39
CASP4-207ENST00000529565 CDCA8Q53HL2 280 aa6.37□□□□□ -1.39
CASP4-207ENST00000529565 PRXQ9BXM0 1461 aa6.37□□□□□ -1.39
CASP4-207ENST00000529565 OSCARQ8IYS5 282 aa6.36□□□□□ -1.39
CASP4-207ENST00000529565 TULP1O00294 542 aaPredicted RBP6.35□□□□□ -1.39
CASP4-207ENST00000529565 PPP1R15AO75807 674 aaPredicted RBP6.35□□□□□ -1.39
CASP4-207ENST00000529565 EFCAB5A4FU69 1503 aa6.34□□□□□ -1.39
CASP4-207ENST00000529565 ABCA10Q8WWZ4 1543 aa6.34□□□□□ -1.39
CASP4-207ENST00000529565 RGL3Q3MIN7 710 aa6.34□□□□□ -1.39
CASP4-207ENST00000529565 ARID4BQ4LE39 1312 aaPredicted RBP6.34□□□□□ -1.39
CASP4-207ENST00000529565 RAB3GAP2Q9H2M9 1393 aa6.34□□□□□ -1.39
CASP4-207ENST00000529565 CASKIN1Q8WXD9 1431 aa6.34□□□□□ -1.4
CASP4-207ENST00000529565 TMC1Q8TDI8 760 aa6.33□□□□□ -1.4
CASP4-207ENST00000529565 SIN3AQ96ST3 1273 aa6.33□□□□□ -1.4
CASP4-207ENST00000529565 CARD11Q9BXL7 1154 aa6.33□□□□□ -1.4
CASP4-207ENST00000529565 CNKSR2Q8WXI2 1034 aa6.32□□□□□ -1.4
CASP4-207ENST00000529565 GTF3C3Q9Y5Q9 886 aa6.31□□□□□ -1.4
CASP4-207ENST00000529565 FYCO1Q9BQS8 1478 aa6.31□□□□□ -1.4
CASP4-207ENST00000529565 MSH5O43196 834 aa6.31□□□□□ -1.4
CASP4-207ENST00000529565 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
CASP4-207ENST00000529565 PKD2Q13563 968 aa6.31□□□□□ -1.4
CASP4-207ENST00000529565 NUP155O75694 1391 aa6.31□□□□□ -1.4
CASP4-207ENST00000529565 HDGFP51858 240 aaKnown RBP6.31□□□□□ -1.4
CASP4-207ENST00000529565 HNRNPUQ00839 825 aaKnown RBP eCLIP6.31□□□□□ -1.4
CASP4-207ENST00000529565 MPHOSPH9Q99550 1183 aa6.31□□□□□ -1.4
CASP4-207ENST00000529565 SPAG9O60271 1321 aaKnown RBP6.31□□□□□ -1.4
CASP4-207ENST00000529565 MRS2Q9HD23 443 aa6.31□□□□□ -1.4
CASP4-207ENST00000529565 WDR43Q15061 677 aaKnown RBP eCLIP6.3□□□□□ -1.4
CASP4-207ENST00000529565 FAM9BQ8IZU0 186 aa6.3□□□□□ -1.4
CASP4-207ENST00000529565 LRRC9Q6ZRR7 1453 aa6.3□□□□□ -1.4
CASP4-207ENST00000529565 ZBTB47Q9UFB7 747 aaPredicted RBP6.3□□□□□ -1.4
CASP4-207ENST00000529565 MYOM3Q5VTT5 1437 aa6.29□□□□□ -1.4
CASP4-207ENST00000529565 CUL7Q14999 1698 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms