RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
NR1H3-231ENST00000529540 CTTNBP2Q8WZ74 1663 aa23.14■■□□□ 1.29
NR1H3-231ENST00000529540 PCGF6Q9BYE7 350 aa23.11■■□□□ 1.29
NR1H3-231ENST00000529540 KIAA0586Q9BVV6 1533 aa23.1■■□□□ 1.29
NR1H3-231ENST00000529540 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
NR1H3-231ENST00000529540 IQGAP2Q13576 1575 aa23.06■■□□□ 1.28
NR1H3-231ENST00000529540 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
NR1H3-231ENST00000529540 CEP162Q5TB80 1403 aa22.98■■□□□ 1.27
NR1H3-231ENST00000529540 CLASP1Q7Z460 1538 aa22.97■■□□□ 1.27
NR1H3-231ENST00000529540 EFCAB5A4FU69 1503 aa22.96■■□□□ 1.27
NR1H3-231ENST00000529540 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
NR1H3-231ENST00000529540 CLIP1P30622 1438 aa22.95■■□□□ 1.26
NR1H3-231ENST00000529540 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
NR1H3-231ENST00000529540 SHROOM2Q13796 1616 aa22.89■■□□□ 1.25
NR1H3-231ENST00000529540 CARMIL2Q6F5E8 1435 aa22.88■■□□□ 1.25
NR1H3-231ENST00000529540 SAMD9Q5K651 1589 aa22.87■■□□□ 1.25
NR1H3-231ENST00000529540 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
NR1H3-231ENST00000529540 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
NR1H3-231ENST00000529540 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
NR1H3-231ENST00000529540 DISP1Q96F81 1524 aa22.8■■□□□ 1.24
NR1H3-231ENST00000529540 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
NR1H3-231ENST00000529540 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
NR1H3-231ENST00000529540 PPARGC1BQ86YN6 1023 aaKnown RBP22.77■■□□□ 1.24
NR1H3-231ENST00000529540 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
NR1H3-231ENST00000529540 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
NR1H3-231ENST00000529540 FHOD3Q2V2M9 1422 aa22.72■■□□□ 1.23
NR1H3-231ENST00000529540 VPS8Q8N3P4 1428 aa22.69■■□□□ 1.22
NR1H3-231ENST00000529540 P3H3Q8IVL6 736 aa22.69■■□□□ 1.22
NR1H3-231ENST00000529540 PTPRGP23470 1445 aa22.63■■□□□ 1.21
NR1H3-231ENST00000529540 ERCC6L2Q5T890 1561 aa22.61■■□□□ 1.21
NR1H3-231ENST00000529540 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
NR1H3-231ENST00000529540 CASKIN1Q8WXD9 1431 aa22.58■■□□□ 1.21
NR1H3-231ENST00000529540 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.21
NR1H3-231ENST00000529540 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
NR1H3-231ENST00000529540 PCF11O94913 1555 aaKnown RBP22.53■■□□□ 1.2
NR1H3-231ENST00000529540 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
NR1H3-231ENST00000529540 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
NR1H3-231ENST00000529540 ABCA8O94911 1581 aa22.52■■□□□ 1.2
NR1H3-231ENST00000529540 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
NR1H3-231ENST00000529540 TTBK1Q5TCY1 1321 aaPredicted RBP22.51■■□□□ 1.19
NR1H3-231ENST00000529540 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
NR1H3-231ENST00000529540 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
NR1H3-231ENST00000529540 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
NR1H3-231ENST00000529540 APLP2Q06481 763 aa22.5■■□□□ 1.19
NR1H3-231ENST00000529540 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
NR1H3-231ENST00000529540 UHRF1BP1LA0JNW5 1464 aa22.48■■□□□ 1.19
NR1H3-231ENST00000529540 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
NR1H3-231ENST00000529540 ABCC2Q92887 1545 aa22.47■■□□□ 1.19
NR1H3-231ENST00000529540 MAP3K1Q13233 1512 aa22.46■■□□□ 1.19
NR1H3-231ENST00000529540 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
NR1H3-231ENST00000529540 NUP153P49790 1475 aaKnown RBP22.43■■□□□ 1.18
NR1H3-231ENST00000529540 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
NR1H3-231ENST00000529540 TIAM1Q13009 1591 aa22.37■■□□□ 1.17
NR1H3-231ENST00000529540 CFAP43Q8NDM7 1665 aa22.37■■□□□ 1.17
NR1H3-231ENST00000529540 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
NR1H3-231ENST00000529540 DNAJC5Q9H3Z4 198 aa22.36■■□□□ 1.17
NR1H3-231ENST00000529540 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
NR1H3-231ENST00000529540 KDM5BQ9UGL1 1544 aa22.34■■□□□ 1.17
NR1H3-231ENST00000529540 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.16
NR1H3-231ENST00000529540 ATP10BO94823 1461 aa22.32■■□□□ 1.16
NR1H3-231ENST00000529540 NPM1P06748 294 aaKnown RBP eCLIP22.31■■□□□ 1.16
NR1H3-231ENST00000529540 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
NR1H3-231ENST00000529540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
NR1H3-231ENST00000529540 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
NR1H3-231ENST00000529540 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
NR1H3-231ENST00000529540 LRRC9Q6ZRR7 1453 aa22.27■■□□□ 1.16
NR1H3-231ENST00000529540 ZCCHC11Q5TAX3 1644 aaKnown RBP22.27■■□□□ 1.15
NR1H3-231ENST00000529540 MTUS2Q5JR59 1369 aa22.26■■□□□ 1.15
NR1H3-231ENST00000529540 EHBP1L1Q8N3D4 1523 aa22.26■■□□□ 1.15
NR1H3-231ENST00000529540 PLEKHD1A6NEE1 506 aa22.24■■□□□ 1.15
NR1H3-231ENST00000529540 ARID3CA6NKF2 412 aa22.23■■□□□ 1.15
NR1H3-231ENST00000529540 TROQ12816 1431 aaPredicted RBP22.21■■□□□ 1.15
NR1H3-231ENST00000529540 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
NR1H3-231ENST00000529540 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
NR1H3-231ENST00000529540 SUPT6HQ7KZ85 1726 aaKnown RBP22.16■■□□□ 1.14
NR1H3-231ENST00000529540 WDR7Q9Y4E6 1490 aa22.15■■□□□ 1.14
NR1H3-231ENST00000529540 MAGI3Q5TCQ9 1506 aa22.15■■□□□ 1.14
NR1H3-231ENST00000529540 KIF14Q15058 1648 aa22.13■■□□□ 1.13
NR1H3-231ENST00000529540 ASXL2Q76L83 1435 aa22.13■■□□□ 1.13
NR1H3-231ENST00000529540 NCOA2Q15596 1464 aa22.08■■□□□ 1.13
NR1H3-231ENST00000529540 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.11
NR1H3-231ENST00000529540 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
NR1H3-231ENST00000529540 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
NR1H3-231ENST00000529540 ITSN2Q9NZM3 1697 aa21.99■■□□□ 1.11
NR1H3-231ENST00000529540 MYOM3Q5VTT5 1437 aa21.99■■□□□ 1.11
NR1H3-231ENST00000529540 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
NR1H3-231ENST00000529540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.99■■□□□ 1.11
NR1H3-231ENST00000529540 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
NR1H3-231ENST00000529540 ABCA9Q8IUA7 1624 aa21.97■■□□□ 1.11
NR1H3-231ENST00000529540 MIA2Q96PC5 1412 aa21.96■■□□□ 1.11
NR1H3-231ENST00000529540 GLI2P10070 1586 aa21.96■■□□□ 1.11
NR1H3-231ENST00000529540 TTC37Q6PGP7 1564 aa21.94■■□□□ 1.1
NR1H3-231ENST00000529540 ARAP3Q8WWN8 1544 aa21.94■■□□□ 1.1
NR1H3-231ENST00000529540 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
NR1H3-231ENST00000529540 MYO5CQ9NQX4 1742 aa21.93■■□□□ 1.1
NR1H3-231ENST00000529540 RRBP1Q9P2E9 1410 aaKnown RBP21.92■■□□□ 1.1
NR1H3-231ENST00000529540 DIP2BQ9P265 1576 aa21.92■■□□□ 1.1
NR1H3-231ENST00000529540 FGD6Q6ZV73 1430 aa21.92■■□□□ 1.1
NR1H3-231ENST00000529540 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
NR1H3-231ENST00000529540 PLCH2O75038 1416 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms