RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
PABPC4-223ENST00000529216 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
PABPC4-223ENST00000529216 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
PABPC4-223ENST00000529216 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.29
PABPC4-223ENST00000529216 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
PABPC4-223ENST00000529216 CLASP1Q7Z460 1538 aa13.25□□□□□ -0.29
PABPC4-223ENST00000529216 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
PABPC4-223ENST00000529216 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
PABPC4-223ENST00000529216 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
PABPC4-223ENST00000529216 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
PABPC4-223ENST00000529216 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
PABPC4-223ENST00000529216 CLIP1P30622 1438 aa13.19□□□□□ -0.3
PABPC4-223ENST00000529216 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
PABPC4-223ENST00000529216 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
PABPC4-223ENST00000529216 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
PABPC4-223ENST00000529216 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-223ENST00000529216 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
PABPC4-223ENST00000529216 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
PABPC4-223ENST00000529216 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-223ENST00000529216 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
PABPC4-223ENST00000529216 RANGAP1P46060 587 aaPredicted RBP13.11□□□□□ -0.31
PABPC4-223ENST00000529216 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
PABPC4-223ENST00000529216 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
PABPC4-223ENST00000529216 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
PABPC4-223ENST00000529216 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
PABPC4-223ENST00000529216 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
PABPC4-223ENST00000529216 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
PABPC4-223ENST00000529216 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
PABPC4-223ENST00000529216 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
PABPC4-223ENST00000529216 PTPRGP23470 1445 aa13.02□□□□□ -0.33
PABPC4-223ENST00000529216 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
PABPC4-223ENST00000529216 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
PABPC4-223ENST00000529216 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
PABPC4-223ENST00000529216 RIMBP3CA6NJZ7 1639 aa12.97□□□□□ -0.33
PABPC4-223ENST00000529216 RIMBP3BA6NNM3 1639 aa12.97□□□□□ -0.33
PABPC4-223ENST00000529216 RIMBP3Q9UFD9 1639 aa12.97□□□□□ -0.33
PABPC4-223ENST00000529216 ABCA8O94911 1581 aa12.97□□□□□ -0.33
PABPC4-223ENST00000529216 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.34
PABPC4-223ENST00000529216 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
PABPC4-223ENST00000529216 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
PABPC4-223ENST00000529216 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
PABPC4-223ENST00000529216 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
PABPC4-223ENST00000529216 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
PABPC4-223ENST00000529216 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
PABPC4-223ENST00000529216 NUP153P49790 1475 aaKnown RBP12.92□□□□□ -0.34
PABPC4-223ENST00000529216 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
PABPC4-223ENST00000529216 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
PABPC4-223ENST00000529216 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
PABPC4-223ENST00000529216 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
PABPC4-223ENST00000529216 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
PABPC4-223ENST00000529216 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
PABPC4-223ENST00000529216 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
PABPC4-223ENST00000529216 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
PABPC4-223ENST00000529216 CDK13Q14004 1512 aaKnown RBP12.85□□□□□ -0.35
PABPC4-223ENST00000529216 APLP2Q06481 763 aa12.85□□□□□ -0.35
PABPC4-223ENST00000529216 CFAP43Q8NDM7 1665 aa12.85□□□□□ -0.35
PABPC4-223ENST00000529216 ATP10BO94823 1461 aa12.85□□□□□ -0.35
PABPC4-223ENST00000529216 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
PABPC4-223ENST00000529216 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
PABPC4-223ENST00000529216 ZCCHC11Q5TAX3 1644 aaKnown RBP12.81□□□□□ -0.36
PABPC4-223ENST00000529216 LRRC9Q6ZRR7 1453 aa12.8□□□□□ -0.36
PABPC4-223ENST00000529216 ARID3CA6NKF2 412 aa12.8□□□□□ -0.36
PABPC4-223ENST00000529216 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
PABPC4-223ENST00000529216 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
PABPC4-223ENST00000529216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
PABPC4-223ENST00000529216 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
PABPC4-223ENST00000529216 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
PABPC4-223ENST00000529216 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
PABPC4-223ENST00000529216 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
PABPC4-223ENST00000529216 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
PABPC4-223ENST00000529216 MAPKBP1O60336 1514 aa12.77□□□□□ -0.37
PABPC4-223ENST00000529216 KANK4Q5T7N3 995 aaPredicted RBP12.76□□□□□ -0.37
PABPC4-223ENST00000529216 WDR7Q9Y4E6 1490 aa12.76□□□□□ -0.37
PABPC4-223ENST00000529216 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
PABPC4-223ENST00000529216 ASXL2Q76L83 1435 aa12.75□□□□□ -0.37
PABPC4-223ENST00000529216 KIF14Q15058 1648 aa12.72□□□□□ -0.37
PABPC4-223ENST00000529216 SUPT6HQ7KZ85 1726 aaKnown RBP12.7□□□□□ -0.38
PABPC4-223ENST00000529216 NCOA2Q15596 1464 aa12.7□□□□□ -0.38
PABPC4-223ENST00000529216 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
PABPC4-223ENST00000529216 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
PABPC4-223ENST00000529216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.38
PABPC4-223ENST00000529216 PHLDB1Q86UU1 1377 aa12.66□□□□□ -0.38
PABPC4-223ENST00000529216 GLI2P10070 1586 aa12.64□□□□□ -0.39
PABPC4-223ENST00000529216 MYOM3Q5VTT5 1437 aa12.64□□□□□ -0.39
PABPC4-223ENST00000529216 ABCA9Q8IUA7 1624 aa12.64□□□□□ -0.39
PABPC4-223ENST00000529216 CCNB3Q8WWL7 1395 aa12.64□□□□□ -0.39
PABPC4-223ENST00000529216 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
PABPC4-223ENST00000529216 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
PABPC4-223ENST00000529216 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
PABPC4-223ENST00000529216 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
PABPC4-223ENST00000529216 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
PABPC4-223ENST00000529216 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
PABPC4-223ENST00000529216 FGD6Q6ZV73 1430 aa12.61□□□□□ -0.39
PABPC4-223ENST00000529216 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
PABPC4-223ENST00000529216 ITSN2Q9NZM3 1697 aa12.61□□□□□ -0.39
PABPC4-223ENST00000529216 PREX2Q70Z35 1606 aa12.6□□□□□ -0.39
PABPC4-223ENST00000529216 PLCH2O75038 1416 aa12.6□□□□□ -0.39
PABPC4-223ENST00000529216 CD109Q6YHK3 1445 aa12.58□□□□□ -0.4
PABPC4-223ENST00000529216 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
PABPC4-223ENST00000529216 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms