RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
CAPN1-217ENST00000529133 CTTNBP2Q8WZ74 1663 aa18.7■□□□□ 0.58
CAPN1-217ENST00000529133 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
CAPN1-217ENST00000529133 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
CAPN1-217ENST00000529133 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
CAPN1-217ENST00000529133 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
CAPN1-217ENST00000529133 TNIKQ9UKE5 1360 aa18.63■□□□□ 0.57
CAPN1-217ENST00000529133 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
CAPN1-217ENST00000529133 JPH4Q96JJ6 628 aa18.59■□□□□ 0.57
CAPN1-217ENST00000529133 PRG4Q92954 1404 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-217ENST00000529133 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
CAPN1-217ENST00000529133 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
CAPN1-217ENST00000529133 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-217ENST00000529133 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
CAPN1-217ENST00000529133 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
CAPN1-217ENST00000529133 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
CAPN1-217ENST00000529133 EFCAB5A4FU69 1503 aa18.5■□□□□ 0.55
CAPN1-217ENST00000529133 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
CAPN1-217ENST00000529133 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
CAPN1-217ENST00000529133 CLIP1P30622 1438 aa18.48■□□□□ 0.55
CAPN1-217ENST00000529133 ARHGAP35Q9NRY4 1499 aa18.47■□□□□ 0.55
CAPN1-217ENST00000529133 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
CAPN1-217ENST00000529133 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
CAPN1-217ENST00000529133 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
CAPN1-217ENST00000529133 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
CAPN1-217ENST00000529133 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
CAPN1-217ENST00000529133 P3H3Q8IVL6 736 aa18.42■□□□□ 0.54
CAPN1-217ENST00000529133 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
CAPN1-217ENST00000529133 PTPRGP23470 1445 aa18.38■□□□□ 0.53
CAPN1-217ENST00000529133 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-217ENST00000529133 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
CAPN1-217ENST00000529133 PLB1Q6P1J6 1458 aa18.29■□□□□ 0.52
CAPN1-217ENST00000529133 ABCA8O94911 1581 aa18.29■□□□□ 0.52
CAPN1-217ENST00000529133 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
CAPN1-217ENST00000529133 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
CAPN1-217ENST00000529133 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
CAPN1-217ENST00000529133 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
CAPN1-217ENST00000529133 RAPGEF6Q8TEU7 1601 aa18.24■□□□□ 0.51
CAPN1-217ENST00000529133 UHRF1BP1LA0JNW5 1464 aa18.24■□□□□ 0.51
CAPN1-217ENST00000529133 PCF11O94913 1555 aaKnown RBP18.24■□□□□ 0.51
CAPN1-217ENST00000529133 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
CAPN1-217ENST00000529133 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
CAPN1-217ENST00000529133 NUP153P49790 1475 aaKnown RBP18.2■□□□□ 0.5
CAPN1-217ENST00000529133 FYCO1Q9BQS8 1478 aa18.2■□□□□ 0.5
CAPN1-217ENST00000529133 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
CAPN1-217ENST00000529133 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
CAPN1-217ENST00000529133 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-217ENST00000529133 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
CAPN1-217ENST00000529133 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
CAPN1-217ENST00000529133 ATP10BO94823 1461 aa18.12■□□□□ 0.49
CAPN1-217ENST00000529133 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
CAPN1-217ENST00000529133 ZCCHC11Q5TAX3 1644 aaKnown RBP18.12■□□□□ 0.49
CAPN1-217ENST00000529133 LRRIQ1Q96JM4 1722 aa18.1■□□□□ 0.49
CAPN1-217ENST00000529133 CCDC18Q5T9S5 1454 aa18.1■□□□□ 0.49
CAPN1-217ENST00000529133 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
CAPN1-217ENST00000529133 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
CAPN1-217ENST00000529133 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
CAPN1-217ENST00000529133 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
CAPN1-217ENST00000529133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-217ENST00000529133 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
CAPN1-217ENST00000529133 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
CAPN1-217ENST00000529133 ASXL2Q76L83 1435 aa18.02■□□□□ 0.48
CAPN1-217ENST00000529133 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
CAPN1-217ENST00000529133 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
CAPN1-217ENST00000529133 APLP2Q06481 763 aa17.97■□□□□ 0.47
CAPN1-217ENST00000529133 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-217ENST00000529133 TROQ12816 1431 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-217ENST00000529133 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
CAPN1-217ENST00000529133 EHBP1L1Q8N3D4 1523 aa17.95■□□□□ 0.46
CAPN1-217ENST00000529133 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
CAPN1-217ENST00000529133 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
CAPN1-217ENST00000529133 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-217ENST00000529133 KIF14Q15058 1648 aa17.9■□□□□ 0.46
CAPN1-217ENST00000529133 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
CAPN1-217ENST00000529133 DIP2BQ9P265 1576 aa17.9■□□□□ 0.46
CAPN1-217ENST00000529133 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
CAPN1-217ENST00000529133 GLI2P10070 1586 aa17.87■□□□□ 0.45
CAPN1-217ENST00000529133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.86■□□□□ 0.451e-9■■■■□ 24
CAPN1-217ENST00000529133 ABCA9Q8IUA7 1624 aa17.84■□□□□ 0.45
CAPN1-217ENST00000529133 TTC37Q6PGP7 1564 aa17.84■□□□□ 0.45
CAPN1-217ENST00000529133 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
CAPN1-217ENST00000529133 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
CAPN1-217ENST00000529133 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
CAPN1-217ENST00000529133 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
CAPN1-217ENST00000529133 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
CAPN1-217ENST00000529133 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
CAPN1-217ENST00000529133 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-217ENST00000529133 CD109Q6YHK3 1445 aa17.77■□□□□ 0.44
CAPN1-217ENST00000529133 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.43
CAPN1-217ENST00000529133 GPATCH8Q9UKJ3 1502 aaKnown RBP17.76■□□□□ 0.43
CAPN1-217ENST00000529133 PHLDB1Q86UU1 1377 aa17.75■□□□□ 0.43
CAPN1-217ENST00000529133 PLCH2O75038 1416 aa17.74■□□□□ 0.43
CAPN1-217ENST00000529133 PREX2Q70Z35 1606 aa17.74■□□□□ 0.43
CAPN1-217ENST00000529133 MYO5CQ9NQX4 1742 aa17.74■□□□□ 0.43
CAPN1-217ENST00000529133 ARAP3Q8WWN8 1544 aa17.73■□□□□ 0.43
CAPN1-217ENST00000529133 CDC42BPAQ5VT25 1732 aa17.73■□□□□ 0.43
CAPN1-217ENST00000529133 MYOM3Q5VTT5 1437 aa17.72■□□□□ 0.43
CAPN1-217ENST00000529133 ITSN2Q9NZM3 1697 aa17.72■□□□□ 0.43
CAPN1-217ENST00000529133 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.43
CAPN1-217ENST00000529133 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms