RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, human

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-215	ENST00000528488	UBTF	P17480	764 aa	Known RBP	32.99	■■■□□ 2.87
C11orf49-215	ENST00000528488	KIAA0586	Q9BVV6	1533 aa		32.88	■■■□□ 2.85
C11orf49-215	ENST00000528488	CLASP1	Q7Z460	1538 aa		32.87	■■■□□ 2.85
C11orf49-215	ENST00000528488	IQGAP2	Q13576	1575 aa		32.86	■■■□□ 2.85
C11orf49-215	ENST00000528488	OSCAR	Q8IYS5	282 aa		32.86	■■■□□ 2.85
C11orf49-215	ENST00000528488	TNIK	Q9UKE5	1360 aa		32.86	■■■□□ 2.85
C11orf49-215	ENST00000528488	SHROOM2	Q13796	1616 aa		32.71	■■■□□ 2.83
C11orf49-215	ENST00000528488	RANGAP1	P46060	587 aa	Predicted RBP	32.69	■■■□□ 2.82
C11orf49-215	ENST00000528488	UGGT2	Q9NYU1	1516 aa		32.67	■■■□□ 2.82
C11orf49-215	ENST00000528488	JPH4	Q96JJ6	628 aa		32.66	■■■□□ 2.82
C11orf49-215	ENST00000528488	CEP162	Q5TB80	1403 aa		32.63	■■■□□ 2.81
C11orf49-215	ENST00000528488	SAMD9	Q5K651	1589 aa		32.59	■■■□□ 2.81
C11orf49-215	ENST00000528488	CLIP1	P30622	1438 aa		32.58	■■■□□ 2.81
C11orf49-215	ENST00000528488	PRG4	Q92954	1404 aa	Predicted RBP	32.57	■■■□□ 2.8
C11orf49-215	ENST00000528488	EFCAB5	A4FU69	1503 aa		32.56	■■■□□ 2.8
C11orf49-215	ENST00000528488	DISP1	Q96F81	1524 aa		32.56	■■■□□ 2.8
C11orf49-215	ENST00000528488	KIAA0556	O60303	1618 aa		32.55	■■■□□ 2.8
C11orf49-215	ENST00000528488	ARHGAP35	Q9NRY4	1499 aa		32.53	■■■□□ 2.8
C11orf49-215	ENST00000528488	ERCC6L2	Q5T890	1561 aa		32.53	■■■□□ 2.8
C11orf49-215	ENST00000528488	CARMIL2	Q6F5E8	1435 aa		32.49	■■■□□ 2.79
C11orf49-215	ENST00000528488	P3H3	Q8IVL6	736 aa		32.47	■■■□□ 2.79
C11orf49-215	ENST00000528488	FHOD3	Q2V2M9	1422 aa		32.43	■■■□□ 2.78
C11orf49-215	ENST00000528488	ARAP1	Q96P48	1450 aa		32.4	■■■□□ 2.78
C11orf49-215	ENST00000528488	ARHGEF11	O15085	1522 aa		32.39	■■■□□ 2.78
C11orf49-215	ENST00000528488	RIMBP3C	A6NJZ7	1639 aa		32.35	■■■□□ 2.77
C11orf49-215	ENST00000528488	RIMBP3B	A6NNM3	1639 aa		32.35	■■■□□ 2.77
C11orf49-215	ENST00000528488	RIMBP3	Q9UFD9	1639 aa		32.35	■■■□□ 2.77
C11orf49-215	ENST00000528488	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.3	■■■□□ 2.76
C11orf49-215	ENST00000528488	PTPRG	P23470	1445 aa		32.26	■■■□□ 2.75
C11orf49-215	ENST00000528488	FMN1	Q68DA7	1419 aa		32.22	■■■□□ 2.75
C11orf49-215	ENST00000528488	VPS8	Q8N3P4	1428 aa		32.17	■■■□□ 2.74
C11orf49-215	ENST00000528488	DNAJC5	Q9H3Z4	198 aa		32.15	■■■□□ 2.74
C11orf49-215	ENST00000528488	PCF11	O94913	1555 aa	Known RBP	32.15	■■■□□ 2.74
C11orf49-215	ENST00000528488	RAPGEF6	Q8TEU7	1601 aa		32.14	■■■□□ 2.73
C11orf49-215	ENST00000528488	PLB1	Q6P1J6	1458 aa		32.13	■■■□□ 2.73
C11orf49-215	ENST00000528488	ABCA8	O94911	1581 aa		32.13	■■■□□ 2.73
C11orf49-215	ENST00000528488	UACA	Q9BZF9	1416 aa		32.08	■■■□□ 2.73
C11orf49-215	ENST00000528488	CASKIN1	Q8WXD9	1431 aa		32.07	■■■□□ 2.72
C11orf49-215	ENST00000528488	FYCO1	Q9BQS8	1478 aa		32.05	■■■□□ 2.72
C11orf49-215	ENST00000528488	HECW1	Q76N89	1606 aa		32.04	■■■□□ 2.72
C11orf49-215	ENST00000528488	ABCC2	Q92887	1545 aa		32.03	■■■□□ 2.72
C11orf49-215	ENST00000528488	CYB5RL	Q6IPT4	315 aa		32.02	■■■□□ 2.72
C11orf49-215	ENST00000528488	ADCY10	Q96PN6	1610 aa		32.02	■■■□□ 2.72
C11orf49-215	ENST00000528488	LRRIQ1	Q96JM4	1722 aa		32.02	■■■□□ 2.72
C11orf49-215	ENST00000528488	ATP1B4	Q9UN42	357 aa	Predicted RBP	32	■■■□□ 2.71
C11orf49-215	ENST00000528488	UHRF1BP1L	A0JNW5	1464 aa		31.99	■■■□□ 2.71
C11orf49-215	ENST00000528488	NUP153	P49790	1475 aa	Known RBP	31.99	■■■□□ 2.71
C11orf49-215	ENST00000528488	ARID3C	A6NKF2	412 aa		31.91	■■■□□ 2.7
C11orf49-215	ENST00000528488	EPRS	P07814	1512 aa	Known RBP	31.89	■■■□□ 2.7
C11orf49-215	ENST00000528488	CDK13	Q14004	1512 aa	Known RBP	31.88	■■■□□ 2.69
C11orf49-215	ENST00000528488	ZCCHC11	Q5TAX3	1644 aa	Known RBP	31.86	■■■□□ 2.69
C11orf49-215	ENST00000528488	CCDC18	Q5T9S5	1454 aa		31.86	■■■□□ 2.69
C11orf49-215	ENST00000528488	CFAP43	Q8NDM7	1665 aa		31.86	■■■□□ 2.69
C11orf49-215	ENST00000528488	ATP10B	O94823	1461 aa		31.84	■■■□□ 2.69
C11orf49-215	ENST00000528488	KDM5B	Q9UGL1	1544 aa		31.84	■■■□□ 2.69
C11orf49-215	ENST00000528488	TIAM1	Q13009	1591 aa		31.82	■■■□□ 2.68
C11orf49-215	ENST00000528488	MAP3K1	Q13233	1512 aa		31.77	■■■□□ 2.68
C11orf49-215	ENST00000528488	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.77	■■■□□ 2.68
C11orf49-215	ENST00000528488	APLP2	Q06481	763 aa		31.77	■■■□□ 2.68
C11orf49-215	ENST00000528488	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.77	■■■□□ 2.68
C11orf49-215	ENST00000528488	NPM1	P06748	294 aa	Known RBP eCLIP	31.73	■■■□□ 2.67
C11orf49-215	ENST00000528488	MAGI3	Q5TCQ9	1506 aa		31.68	■■■□□ 2.66
C11orf49-215	ENST00000528488	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.64	■■■□□ 2.65
C11orf49-215	ENST00000528488	LRRC9	Q6ZRR7	1453 aa		31.63	■■■□□ 2.65
C11orf49-215	ENST00000528488	KANK4	Q5T7N3	995 aa	Predicted RBP	31.63	■■■□□ 2.65
C11orf49-215	ENST00000528488	MTUS2	Q5JR59	1369 aa		31.61	■■■□□ 2.65
C11orf49-215	ENST00000528488	ASXL2	Q76L83	1435 aa		31.61	■■■□□ 2.65
C11orf49-215	ENST00000528488	EHBP1L1	Q8N3D4	1523 aa		31.61	■■■□□ 2.65
C11orf49-215	ENST00000528488	MAPKBP1	O60336	1514 aa		31.61	■■■□□ 2.65
C11orf49-215	ENST00000528488	PLEKHD1	A6NEE1	506 aa		31.6	■■■□□ 2.65
C11orf49-215	ENST00000528488	TRO	Q12816	1431 aa	Predicted RBP	31.58	■■■□□ 2.65
C11orf49-215	ENST00000528488	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.57	■■■□□ 2.64
C11orf49-215	ENST00000528488	WDR7	Q9Y4E6	1490 aa		31.57	■■■□□ 2.64
C11orf49-215	ENST00000528488	KIF14	Q15058	1648 aa		31.52	■■■□□ 2.64
C11orf49-215	ENST00000528488	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.51	■■■□□ 2.64
C11orf49-215	ENST00000528488	KCNH8	Q96L42	1107 aa		31.46	■■■□□ 2.63
C11orf49-215	ENST00000528488	NCOA2	Q15596	1464 aa		31.42	■■■□□ 2.62
C11orf49-215	ENST00000528488	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.4	■■■□□ 2.62
C11orf49-215	ENST00000528488	TTC37	Q6PGP7	1564 aa		31.39	■■■□□ 2.62
C11orf49-215	ENST00000528488	DIP2B	Q9P265	1576 aa		31.38	■■■□□ 2.61
C11orf49-215	ENST00000528488	ABCC10	Q5T3U5	1492 aa		31.37	■■■□□ 2.61
C11orf49-215	ENST00000528488	ABCA9	Q8IUA7	1624 aa		31.36	■■■□□ 2.61
C11orf49-215	ENST00000528488	KIF13A	Q9H1H9	1805 aa		31.35	■■■□□ 2.61
C11orf49-215	ENST00000528488	CDC42BPA	Q5VT25	1732 aa		31.32	■■■□□ 2.6
C11orf49-215	ENST00000528488	GLI2	P10070	1586 aa		31.32	■■■□□ 2.6
C11orf49-215	ENST00000528488	MYO5C	Q9NQX4	1742 aa		31.31	■■■□□ 2.6
C11orf49-215	ENST00000528488	PHLDB1	Q86UU1	1377 aa		31.29	■■■□□ 2.6
C11orf49-215	ENST00000528488	ITSN2	Q9NZM3	1697 aa		31.28	■■■□□ 2.6
C11orf49-215	ENST00000528488	CCNB3	Q8WWL7	1395 aa		31.28	■■■□□ 2.6
C11orf49-215	ENST00000528488	FAM69C	Q0P6D2	419 aa		31.26	■■■□□ 2.59
C11orf49-215	ENST00000528488	MAP3K4	Q9Y6R4	1608 aa		31.26	■■■□□ 2.59
C11orf49-215	ENST00000528488	PREX2	Q70Z35	1606 aa		31.25	■■■□□ 2.59
C11orf49-215	ENST00000528488	CDC42BPB	Q9Y5S2	1711 aa		31.24	■■■□□ 2.59
C11orf49-215	ENST00000528488	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.24	■■■□□ 2.59
C11orf49-215	ENST00000528488	MYOM3	Q5VTT5	1437 aa		31.23	■■■□□ 2.59
C11orf49-215	ENST00000528488	CD109	Q6YHK3	1445 aa		31.19	■■■□□ 2.58
C11orf49-215	ENST00000528488	TSPOAP1	O95153	1857 aa		31.19	■■■□□ 2.58
C11orf49-215	ENST00000528488	PLCH2	O75038	1416 aa		31.16	■■■□□ 2.58
C11orf49-215	ENST00000528488	ARHGAP5	Q13017	1502 aa		31.15	■■■□□ 2.58
C11orf49-215	ENST00000528488	ARAP3	Q8WWN8	1544 aa		31.14	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms