RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	LRRC9	Q6ZRR7	1453 aa		34.24	■■■■□ 3.07
GSDMD-208	ENST00000528475	CFAP43	Q8NDM7	1665 aa		34.21	■■■■□ 3.07
GSDMD-208	ENST00000528475	ABCA10	Q8WWZ4	1543 aa		34.2	■■■■□ 3.07
GSDMD-208	ENST00000528475	YTHDC1	Q96MU7	727 aa	Known RBP	34.18	■■■■□ 3.06
GSDMD-208	ENST00000528475	TOPBP1	Q92547	1522 aa		34.12	■■■■□ 3.05
GSDMD-208	ENST00000528475	PCF11	O94913	1555 aa	Known RBP	34.11	■■■■□ 3.05
GSDMD-208	ENST00000528475	RAB3GAP2	Q9H2M9	1393 aa		34.11	■■■■□ 3.05
GSDMD-208	ENST00000528475	EFCAB5	A4FU69	1503 aa		34.11	■■■■□ 3.05
GSDMD-208	ENST00000528475	CUL7	Q14999	1698 aa		34.1	■■■■□ 3.05
GSDMD-208	ENST00000528475	POLA1	P09884	1462 aa	Predicted RBP	34.09	■■■■□ 3.05
GSDMD-208	ENST00000528475	PHLDB1	Q86UU1	1377 aa		34.06	■■■■□ 3.04
GSDMD-208	ENST00000528475	MAPKBP1	O60336	1514 aa		34.06	■■■■□ 3.04
GSDMD-208	ENST00000528475	SETD5	Q9C0A6	1442 aa		34.05	■■■■□ 3.04
GSDMD-208	ENST00000528475	RAD54L2	Q9Y4B4	1467 aa		34.05	■■■■□ 3.04
GSDMD-208	ENST00000528475	AQR	O60306	1485 aa	Known RBP eCLIP	34.05	■■■■□ 3.04
GSDMD-208	ENST00000528475	PDS5B	Q9NTI5	1447 aa		34.04	■■■■□ 3.04
GSDMD-208	ENST00000528475	FYCO1	Q9BQS8	1478 aa		34.04	■■■■□ 3.04
GSDMD-208	ENST00000528475	ITGAE	P38570	1179 aa		34	■■■■□ 3.03
GSDMD-208	ENST00000528475	CTTNBP2	Q8WZ74	1663 aa		33.99	■■■■□ 3.03
GSDMD-208	ENST00000528475	CASKIN1	Q8WXD9	1431 aa		33.98	■■■■□ 3.03
GSDMD-208	ENST00000528475	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.94	■■■■□ 3.02
GSDMD-208	ENST00000528475	WDR97	A6NE52	1622 aa		33.94	■■■■□ 3.02
GSDMD-208	ENST00000528475	FHOD3	Q2V2M9	1422 aa		33.93	■■■■□ 3.02
GSDMD-208	ENST00000528475	URB2	Q14146	1524 aa	Known RBP	33.9	■■■■□ 3.02
GSDMD-208	ENST00000528475	P3H3	Q8IVL6	736 aa		33.84	■■■■□ 3.01
GSDMD-208	ENST00000528475	FMN1	Q68DA7	1419 aa		33.83	■■■■□ 3.01
GSDMD-208	ENST00000528475	KIF21A	Q7Z4S6	1674 aa		33.82	■■■■□ 3
GSDMD-208	ENST00000528475	FAM50A	Q14320	339 aa	Known RBP	33.8	■■■■□ 3
GSDMD-208	ENST00000528475	ABCA5	Q8WWZ7	1642 aa		33.79	■■■■□ 3
GSDMD-208	ENST00000528475	SNAPC4	Q5SXM2	1469 aa		33.77	■■■■□ 3
GSDMD-208	ENST00000528475	TIMELESS	Q9UNS1	1208 aa		33.76	■■■□□ 2.99
GSDMD-208	ENST00000528475	SAMD9	Q5K651	1589 aa		33.74	■■■□□ 2.99
GSDMD-208	ENST00000528475	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.7	■■■□□ 2.98
GSDMD-208	ENST00000528475	FGD6	Q6ZV73	1430 aa		33.67	■■■□□ 2.98
GSDMD-208	ENST00000528475	THOC2	Q8NI27	1593 aa	Known RBP	33.65	■■■□□ 2.98
GSDMD-208	ENST00000528475	GAPVD1	Q14C86	1478 aa		33.64	■■■□□ 2.98
GSDMD-208	ENST00000528475	GRIN2B	Q13224	1484 aa		33.58	■■■□□ 2.97
GSDMD-208	ENST00000528475	SIN3A	Q96ST3	1273 aa		33.58	■■■□□ 2.97
GSDMD-208	ENST00000528475	TDRD9	Q8NDG6	1382 aa	Known RBP	33.57	■■■□□ 2.96
GSDMD-208	ENST00000528475	LRRIQ1	Q96JM4	1722 aa		33.56	■■■□□ 2.96
GSDMD-208	ENST00000528475	MRC2	Q9UBG0	1479 aa		33.56	■■■□□ 2.96
GSDMD-208	ENST00000528475	MTUS2	Q5JR59	1369 aa		33.55	■■■□□ 2.96
GSDMD-208	ENST00000528475	HFM1	A2PYH4	1435 aa		33.51	■■■□□ 2.95
GSDMD-208	ENST00000528475	EHBP1L1	Q8N3D4	1523 aa		33.49	■■■□□ 2.95
GSDMD-208	ENST00000528475	NCOA2	Q15596	1464 aa		33.47	■■■□□ 2.95
GSDMD-208	ENST00000528475	CCDC18	Q5T9S5	1454 aa		33.47	■■■□□ 2.95
GSDMD-208	ENST00000528475	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.47	■■■□□ 2.95
GSDMD-208	ENST00000528475	MYOM3	Q5VTT5	1437 aa		33.47	■■■□□ 2.95
GSDMD-208	ENST00000528475	TARBP1	Q13395	1621 aa	Known RBP	33.47	■■■□□ 2.95
GSDMD-208	ENST00000528475	PTPN23	Q9H3S7	1636 aa		33.46	■■■□□ 2.95
GSDMD-208	ENST00000528475	PPP1R15A	O75807	674 aa	Predicted RBP	33.46	■■■□□ 2.95
GSDMD-208	ENST00000528475	UACA	Q9BZF9	1416 aa		33.44	■■■□□ 2.94
GSDMD-208	ENST00000528475	PTPRK	Q15262	1439 aa		33.43	■■■□□ 2.94
GSDMD-208	ENST00000528475	ARHGEF11	O15085	1522 aa		33.41	■■■□□ 2.94
GSDMD-208	ENST00000528475	UGGT2	Q9NYU1	1516 aa		33.39	■■■□□ 2.94
GSDMD-208	ENST00000528475	NAIP	Q13075	1403 aa		33.36	■■■□□ 2.93
GSDMD-208	ENST00000528475	SUPT16H	Q9Y5B9	1047 aa	Known RBP	33.35	■■■□□ 2.93
GSDMD-208	ENST00000528475	WDR62	O43379	1518 aa		33.34	■■■□□ 2.93
GSDMD-208	ENST00000528475	PBRM1	Q86U86	1689 aa		33.31	■■■□□ 2.92
GSDMD-208	ENST00000528475	DDX10	Q13206	875 aa	Known RBP	33.3	■■■□□ 2.92
GSDMD-208	ENST00000528475	ERCC6	Q03468	1493 aa		33.3	■■■□□ 2.92
GSDMD-208	ENST00000528475	TCOF1	Q13428	1488 aa	Known RBP	33.29	■■■□□ 2.92
GSDMD-208	ENST00000528475	HECW1	Q76N89	1606 aa		33.29	■■■□□ 2.92
GSDMD-208	ENST00000528475	TONSL	Q96HA7	1378 aa		33.28	■■■□□ 2.92
GSDMD-208	ENST00000528475	MAGI3	Q5TCQ9	1506 aa		33.27	■■■□□ 2.92
GSDMD-208	ENST00000528475	KCNH8	Q96L42	1107 aa		33.25	■■■□□ 2.91
GSDMD-208	ENST00000528475	IQGAP2	Q13576	1575 aa		33.24	■■■□□ 2.91
GSDMD-208	ENST00000528475	ADAMTS12	P58397	1594 aa		33.23	■■■□□ 2.91
GSDMD-208	ENST00000528475	IFT140	Q96RY7	1462 aa		33.22	■■■□□ 2.91
GSDMD-208	ENST00000528475	AKNA	Q7Z591	1439 aa		33.2	■■■□□ 2.91
GSDMD-208	ENST00000528475	GCC2	Q8IWJ2	1684 aa		33.2	■■■□□ 2.91
GSDMD-208	ENST00000528475	CCER2	I3L3R5	266 aa		33.18	■■■□□ 2.9
GSDMD-208	ENST00000528475	EPRS	P07814	1512 aa	Known RBP	33.16	■■■□□ 2.9
GSDMD-208	ENST00000528475	KDM5B	Q9UGL1	1544 aa		33.14	■■■□□ 2.89
GSDMD-208	ENST00000528475	MYT1	Q01538	1121 aa		33.13	■■■□□ 2.89
GSDMD-208	ENST00000528475	MIA2	Q96PC5	1412 aa		33.12	■■■□□ 2.89
GSDMD-208	ENST00000528475	ZNF608	Q9ULD9	1512 aa	Predicted RBP	33.07	■■■□□ 2.89
GSDMD-208	ENST00000528475	ANP32C	O43423	234 aa		33.06	■■■□□ 2.88
GSDMD-208	ENST00000528475	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.04	■■■□□ 2.88
GSDMD-208	ENST00000528475	DENND4B	O75064	1496 aa	Predicted RBP	33.01	■■■□□ 2.87
GSDMD-208	ENST00000528475	CDK13	Q14004	1512 aa	Known RBP	33	■■■□□ 2.87
GSDMD-208	ENST00000528475	RRP7BP	Q9NSQ0	103 aa		32.95	■■■□□ 2.87
GSDMD-208	ENST00000528475	KDM6B	O15054	1643 aa		32.93	■■■□□ 2.86
GSDMD-208	ENST00000528475	KIAA0586	Q9BVV6	1533 aa		32.9	■■■□□ 2.86
GSDMD-208	ENST00000528475	EIF4G3	O43432	1585 aa	Known RBP	32.9	■■■□□ 2.86
GSDMD-208	ENST00000528475	KIAA0556	O60303	1618 aa		32.89	■■■□□ 2.86
GSDMD-208	ENST00000528475	CHIC2	Q9UKJ5	165 aa		32.88	■■■□□ 2.85
GSDMD-208	ENST00000528475	ROCK1	Q13464	1354 aa		32.88	■■■□□ 2.85
GSDMD-208	ENST00000528475	DISP1	Q96F81	1524 aa		32.85	■■■□□ 2.85
GSDMD-208	ENST00000528475	DNMT1	P26358	1616 aa	Known RBP	32.82	■■■□□ 2.84
GSDMD-208	ENST00000528475	TRIM52	Q96A61	297 aa		32.82	■■■□□ 2.84
GSDMD-208	ENST00000528475	MPHOSPH9	Q99550	1183 aa		32.81	■■■□□ 2.84
GSDMD-208	ENST00000528475	DAPK1	P53355	1430 aa		32.81	■■■□□ 2.84
GSDMD-208	ENST00000528475	RAPGEF6	Q8TEU7	1601 aa		32.78	■■■□□ 2.84
GSDMD-208	ENST00000528475	NUP153	P49790	1475 aa	Known RBP	32.78	■■■□□ 2.84
GSDMD-208	ENST00000528475	TSHZ2	Q9NRE2	1034 aa		32.77	■■■□□ 2.84
GSDMD-208	ENST00000528475	GRIN2A	Q12879	1464 aa		32.74	■■■□□ 2.83
GSDMD-208	ENST00000528475	ABCC5	O15440	1437 aa		32.74	■■■□□ 2.83
GSDMD-208	ENST00000528475	HSPA5	P11021	654 aa	Known RBP	32.74	■■■□□ 2.83
GSDMD-208	ENST00000528475	FKBP8	Q14318	412 aa		32.73	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms