RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 LOC105371045A0A1W2PR82 267 aa35.79■■■■□ 3.32
PACSIN3-205ENST00000528462 EHMT2Q96KQ7 1210 aa35.77■■■■□ 3.32
PACSIN3-205ENST00000528462 TNIKQ9UKE5 1360 aa35.75■■■■□ 3.31
PACSIN3-205ENST00000528462 CTTNBP2Q8WZ74 1663 aa35.73■■■■□ 3.31
PACSIN3-205ENST00000528462 CLASP1Q7Z460 1538 aa35.72■■■■□ 3.31
PACSIN3-205ENST00000528462 IQGAP2Q13576 1575 aa35.68■■■■□ 3.3
PACSIN3-205ENST00000528462 JPH4Q96JJ6 628 aa35.56■■■■□ 3.28
PACSIN3-205ENST00000528462 UGGT2Q9NYU1 1516 aa35.55■■■■□ 3.28
PACSIN3-205ENST00000528462 SHROOM2Q13796 1616 aa35.54■■■■□ 3.28
PACSIN3-205ENST00000528462 CEP162Q5TB80 1403 aa35.42■■■■□ 3.26
PACSIN3-205ENST00000528462 PRG4Q92954 1404 aaPredicted RBP35.4■■■■□ 3.26
PACSIN3-205ENST00000528462 EFCAB5A4FU69 1503 aa35.4■■■■□ 3.26
PACSIN3-205ENST00000528462 DISP1Q96F81 1524 aa35.39■■■■□ 3.26
PACSIN3-205ENST00000528462 CLIP1P30622 1438 aa35.38■■■■□ 3.25
PACSIN3-205ENST00000528462 SAMD9Q5K651 1589 aa35.37■■■■□ 3.25
PACSIN3-205ENST00000528462 CARMIL2Q6F5E8 1435 aa35.37■■■■□ 3.25
PACSIN3-205ENST00000528462 ARHGAP35Q9NRY4 1499 aa35.33■■■■□ 3.25
PACSIN3-205ENST00000528462 RANGAP1P46060 587 aaPredicted RBP35.33■■■■□ 3.25
PACSIN3-205ENST00000528462 KIAA0556O60303 1618 aa35.32■■■■□ 3.24
PACSIN3-205ENST00000528462 ERCC6L2Q5T890 1561 aa35.24■■■■□ 3.23
PACSIN3-205ENST00000528462 ARHGEF11O15085 1522 aa35.21■■■■□ 3.23
PACSIN3-205ENST00000528462 ARAP1Q96P48 1450 aa35.18■■■■□ 3.22
PACSIN3-205ENST00000528462 P3H3Q8IVL6 736 aa35.17■■■■□ 3.22
PACSIN3-205ENST00000528462 FHOD3Q2V2M9 1422 aa35.17■■■■□ 3.22
PACSIN3-205ENST00000528462 PTPRGP23470 1445 aa35.1■■■■□ 3.21
PACSIN3-205ENST00000528462 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
PACSIN3-205ENST00000528462 RIMBP3CA6NJZ7 1639 aa35.07■■■■□ 3.21
PACSIN3-205ENST00000528462 RIMBP3BA6NNM3 1639 aa35.07■■■■□ 3.21
PACSIN3-205ENST00000528462 RIMBP3Q9UFD9 1639 aa35.07■■■■□ 3.21
PACSIN3-205ENST00000528462 FMN1Q68DA7 1419 aa35.07■■■■□ 3.2
PACSIN3-205ENST00000528462 VPS8Q8N3P4 1428 aa34.96■■■■□ 3.19
PACSIN3-205ENST00000528462 TTBK1Q5TCY1 1321 aaPredicted RBP34.92■■■■□ 3.18
PACSIN3-205ENST00000528462 ABCA8O94911 1581 aa34.9■■■■□ 3.18
PACSIN3-205ENST00000528462 UACAQ9BZF9 1416 aa34.9■■■■□ 3.18
PACSIN3-205ENST00000528462 PLB1Q6P1J6 1458 aa34.9■■■■□ 3.18
PACSIN3-205ENST00000528462 CASKIN1Q8WXD9 1431 aa34.88■■■■□ 3.17
PACSIN3-205ENST00000528462 UHRF1BP1LA0JNW5 1464 aa34.85■■■■□ 3.17
PACSIN3-205ENST00000528462 FYCO1Q9BQS8 1478 aa34.84■■■■□ 3.17
PACSIN3-205ENST00000528462 RAPGEF6Q8TEU7 1601 aa34.84■■■■□ 3.17
PACSIN3-205ENST00000528462 CYB5RLQ6IPT4 315 aa34.82■■■■□ 3.16
PACSIN3-205ENST00000528462 ABCC2Q92887 1545 aa34.82■■■■□ 3.16
PACSIN3-205ENST00000528462 PCF11O94913 1555 aaKnown RBP34.8■■■■□ 3.16
PACSIN3-205ENST00000528462 NUP153P49790 1475 aaKnown RBP34.76■■■■□ 3.16
PACSIN3-205ENST00000528462 HECW1Q76N89 1606 aa34.75■■■■□ 3.15
PACSIN3-205ENST00000528462 ADCY10Q96PN6 1610 aa34.73■■■■□ 3.15
PACSIN3-205ENST00000528462 KDM5BQ9UGL1 1544 aa34.67■■■■□ 3.14
PACSIN3-205ENST00000528462 EPRSP07814 1512 aaKnown RBP34.66■■■■□ 3.14
PACSIN3-205ENST00000528462 ATP1B4Q9UN42 357 aaPredicted RBP34.65■■■■□ 3.14
PACSIN3-205ENST00000528462 CCDC18Q5T9S5 1454 aa34.65■■■■□ 3.14
PACSIN3-205ENST00000528462 ATP10BO94823 1461 aa34.63■■■■□ 3.13
PACSIN3-205ENST00000528462 MAP3K1Q13233 1512 aa34.61■■■■□ 3.13
PACSIN3-205ENST00000528462 LRRIQ1Q96JM4 1722 aa34.58■■■■□ 3.13
PACSIN3-205ENST00000528462 CDK13Q14004 1512 aaKnown RBP34.55■■■■□ 3.12
PACSIN3-205ENST00000528462 ZCCHC11Q5TAX3 1644 aaKnown RBP34.53■■■■□ 3.12
PACSIN3-205ENST00000528462 NPM1P06748 294 aaKnown RBP eCLIP34.53■■■■□ 3.12
PACSIN3-205ENST00000528462 APLP2Q06481 763 aa34.52■■■■□ 3.12
PACSIN3-205ENST00000528462 ARID3CA6NKF2 412 aa34.51■■■■□ 3.12
PACSIN3-205ENST00000528462 TIAM1Q13009 1591 aa34.51■■■■□ 3.11
PACSIN3-205ENST00000528462 CFAP43Q8NDM7 1665 aa34.48■■■■□ 3.11
PACSIN3-205ENST00000528462 CDK11AQ9UQ88 783 aaPredicted RBP34.47■■■■□ 3.11
PACSIN3-205ENST00000528462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.45■■■■□ 3.11
PACSIN3-205ENST00000528462 HNRNPUL2Q1KMD3 747 aaKnown RBP34.45■■■■□ 3.11
PACSIN3-205ENST00000528462 MAPKBP1O60336 1514 aa34.41■■■■□ 3.1
PACSIN3-205ENST00000528462 PLEKHD1A6NEE1 506 aa34.4■■■■□ 3.1
PACSIN3-205ENST00000528462 LRRC9Q6ZRR7 1453 aa34.37■■■■□ 3.09
PACSIN3-205ENST00000528462 ASXL2Q76L83 1435 aa34.37■■■■□ 3.09
PACSIN3-205ENST00000528462 TROQ12816 1431 aaPredicted RBP34.35■■■■□ 3.09
PACSIN3-205ENST00000528462 MAGI3Q5TCQ9 1506 aa34.35■■■■□ 3.09
PACSIN3-205ENST00000528462 WDR7Q9Y4E6 1490 aa34.34■■■■□ 3.09
PACSIN3-205ENST00000528462 MTUS2Q5JR59 1369 aa34.34■■■■□ 3.09
PACSIN3-205ENST00000528462 KANK4Q5T7N3 995 aaPredicted RBP34.33■■■■□ 3.09
PACSIN3-205ENST00000528462 EHBP1L1Q8N3D4 1523 aa34.31■■■■□ 3.08
PACSIN3-205ENST00000528462 KIF14Q15058 1648 aa34.17■■■■□ 3.06
PACSIN3-205ENST00000528462 KCNH8Q96L42 1107 aa34.15■■■■□ 3.06
PACSIN3-205ENST00000528462 SUPT6HQ7KZ85 1726 aaKnown RBP34.14■■■■□ 3.06
PACSIN3-205ENST00000528462 ABCC10Q5T3U5 1492 aa34.13■■■■□ 3.05
PACSIN3-205ENST00000528462 NCOA2Q15596 1464 aa34.11■■■■□ 3.05
PACSIN3-205ENST00000528462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.08■■■■□ 3.05
PACSIN3-205ENST00000528462 GLI2P10070 1586 aa34.08■■■■□ 3.05
PACSIN3-205ENST00000528462 PPARGC1BQ86YN6 1023 aaKnown RBP34.08■■■■□ 3.05
PACSIN3-205ENST00000528462 DIP2BQ9P265 1576 aa34.07■■■■□ 3.04
PACSIN3-205ENST00000528462 ABCA9Q8IUA7 1624 aa34.06■■■■□ 3.04
PACSIN3-205ENST00000528462 TTC37Q6PGP7 1564 aa34.01■■■■□ 3.04
PACSIN3-205ENST00000528462 CCNB3Q8WWL7 1395 aa33.99■■■■□ 3.03
PACSIN3-205ENST00000528462 FAM69CQ0P6D2 419 aa33.98■■■■□ 3.03
PACSIN3-205ENST00000528462 PHLDB1Q86UU1 1377 aa33.97■■■■□ 3.03
PACSIN3-205ENST00000528462 GPATCH8Q9UKJ3 1502 aaKnown RBP33.97■■■■□ 3.03
PACSIN3-205ENST00000528462 MYOM3Q5VTT5 1437 aa33.94■■■■□ 3.02
PACSIN3-205ENST00000528462 PLCH2O75038 1416 aa33.93■■■■□ 3.02
PACSIN3-205ENST00000528462 ARAP3Q8WWN8 1544 aa33.93■■■■□ 3.02
PACSIN3-205ENST00000528462 CD109Q6YHK3 1445 aa33.93■■■■□ 3.02
PACSIN3-205ENST00000528462 MAP3K4Q9Y6R4 1608 aa33.92■■■■□ 3.02
PACSIN3-205ENST00000528462 KIF13AQ9H1H9 1805 aa33.92■■■■□ 3.02
PACSIN3-205ENST00000528462 CDC42BPAQ5VT25 1732 aa33.9■■■■□ 3.02
PACSIN3-205ENST00000528462 ITSN2Q9NZM3 1697 aa33.89■■■■□ 3.01
PACSIN3-205ENST00000528462 MYO5CQ9NQX4 1742 aa33.88■■■■□ 3.01
PACSIN3-205ENST00000528462 MIA2Q96PC5 1412 aa33.88■■■■□ 3.01
PACSIN3-205ENST00000528462 PREX2Q70Z35 1606 aa33.88■■■■□ 3.01
PACSIN3-205ENST00000528462 CFDP1Q9UEE9 299 aaPredicted RBP33.84■■■■□ 3.01
PACSIN3-205ENST00000528462 FGD6Q6ZV73 1430 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms