RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
RPS3-210ENST00000528439 GRIN2AQ12879 1464 aa16.16■□□□□ 0.18
RPS3-210ENST00000528439 CLIP1P30622 1438 aa16.14■□□□□ 0.17
RPS3-210ENST00000528439 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
RPS3-210ENST00000528439 CHD1O14646 1710 aa16.09■□□□□ 0.17
RPS3-210ENST00000528439 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
RPS3-210ENST00000528439 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
RPS3-210ENST00000528439 IQGAP2Q13576 1575 aa16.06■□□□□ 0.16
RPS3-210ENST00000528439 NUP160Q12769 1436 aa16.06■□□□□ 0.16
RPS3-210ENST00000528439 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
RPS3-210ENST00000528439 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
RPS3-210ENST00000528439 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
RPS3-210ENST00000528439 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
RPS3-210ENST00000528439 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
RPS3-210ENST00000528439 FBLN2P98095 1184 aa16■□□□□ 0.15
RPS3-210ENST00000528439 UGGT2Q9NYU1 1516 aa15.99■□□□□ 0.15
RPS3-210ENST00000528439 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
RPS3-210ENST00000528439 FHOD3Q2V2M9 1422 aa15.96■□□□□ 0.15
RPS3-210ENST00000528439 CLASP1Q7Z460 1538 aa15.93■□□□□ 0.14
RPS3-210ENST00000528439 DISP1Q96F81 1524 aa15.93■□□□□ 0.14
RPS3-210ENST00000528439 KIAA0556O60303 1618 aa15.92■□□□□ 0.14
RPS3-210ENST00000528439 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
RPS3-210ENST00000528439 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
RPS3-210ENST00000528439 PCF11O94913 1555 aaKnown RBP15.9■□□□□ 0.14
RPS3-210ENST00000528439 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
RPS3-210ENST00000528439 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
RPS3-210ENST00000528439 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
RPS3-210ENST00000528439 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
RPS3-210ENST00000528439 FYCO1Q9BQS8 1478 aa15.81■□□□□ 0.12
RPS3-210ENST00000528439 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
RPS3-210ENST00000528439 PRG4Q92954 1404 aaPredicted RBP15.79■□□□□ 0.12
RPS3-210ENST00000528439 LRRIQ1Q96JM4 1722 aa15.79■□□□□ 0.12
RPS3-210ENST00000528439 FOXD1Q16676 465 aa15.78■□□□□ 0.12
RPS3-210ENST00000528439 CFAP43Q8NDM7 1665 aa15.78■□□□□ 0.12
RPS3-210ENST00000528439 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
RPS3-210ENST00000528439 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.11
RPS3-210ENST00000528439 TIAM1Q13009 1591 aa15.76■□□□□ 0.11
RPS3-210ENST00000528439 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
RPS3-210ENST00000528439 HECW1Q76N89 1606 aa15.73■□□□□ 0.11
RPS3-210ENST00000528439 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
RPS3-210ENST00000528439 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
RPS3-210ENST00000528439 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.1
RPS3-210ENST00000528439 ABCA8O94911 1581 aa15.7■□□□□ 0.1
RPS3-210ENST00000528439 NUP153P49790 1475 aaKnown RBP15.69■□□□□ 0.1
RPS3-210ENST00000528439 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
RPS3-210ENST00000528439 KANK4Q5T7N3 995 aaPredicted RBP15.68■□□□□ 0.1
RPS3-210ENST00000528439 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
RPS3-210ENST00000528439 ARHGEF11O15085 1522 aa15.67■□□□□ 0.1
RPS3-210ENST00000528439 EPRSP07814 1512 aaKnown RBP15.66■□□□□ 0.1
RPS3-210ENST00000528439 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
RPS3-210ENST00000528439 MAGI3Q5TCQ9 1506 aa15.65■□□□□ 0.1
RPS3-210ENST00000528439 PTPRGP23470 1445 aa15.65■□□□□ 0.1
RPS3-210ENST00000528439 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
RPS3-210ENST00000528439 APLP2Q06481 763 aa15.64■□□□□ 0.09
RPS3-210ENST00000528439 ATP1B4Q9UN42 357 aaPredicted RBP15.64■□□□□ 0.09
RPS3-210ENST00000528439 RIMBP3CA6NJZ7 1639 aa15.64■□□□□ 0.09
RPS3-210ENST00000528439 RIMBP3BA6NNM3 1639 aa15.64■□□□□ 0.09
RPS3-210ENST00000528439 RIMBP3Q9UFD9 1639 aa15.64■□□□□ 0.09
RPS3-210ENST00000528439 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
RPS3-210ENST00000528439 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
RPS3-210ENST00000528439 ABCC2Q92887 1545 aa15.58■□□□□ 0.09
RPS3-210ENST00000528439 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
RPS3-210ENST00000528439 TRIM26Q12899 539 aaPredicted RBP15.56■□□□□ 0.08
RPS3-210ENST00000528439 ATP10BO94823 1461 aa15.55■□□□□ 0.08
RPS3-210ENST00000528439 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
RPS3-210ENST00000528439 UHRF1BP1LA0JNW5 1464 aa15.54■□□□□ 0.08
RPS3-210ENST00000528439 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
RPS3-210ENST00000528439 PCGF6Q9BYE7 350 aa15.53■□□□□ 0.08
RPS3-210ENST00000528439 PHLDB1Q86UU1 1377 aa15.52■□□□□ 0.08
RPS3-210ENST00000528439 SUPT6HQ7KZ85 1726 aaKnown RBP15.51■□□□□ 0.07
RPS3-210ENST00000528439 NCOA2Q15596 1464 aa15.5■□□□□ 0.07
RPS3-210ENST00000528439 ZCCHC11Q5TAX3 1644 aaKnown RBP15.5■□□□□ 0.07
RPS3-210ENST00000528439 KIF14Q15058 1648 aa15.48■□□□□ 0.07
RPS3-210ENST00000528439 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
RPS3-210ENST00000528439 TROQ12816 1431 aaPredicted RBP15.48■□□□□ 0.07
RPS3-210ENST00000528439 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
RPS3-210ENST00000528439 RRBP1Q9P2E9 1410 aaKnown RBP15.47■□□□□ 0.07
RPS3-210ENST00000528439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
RPS3-210ENST00000528439 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
RPS3-210ENST00000528439 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
RPS3-210ENST00000528439 FGD6Q6ZV73 1430 aa15.41■□□□□ 0.06
RPS3-210ENST00000528439 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
RPS3-210ENST00000528439 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
RPS3-210ENST00000528439 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
RPS3-210ENST00000528439 TTC37Q6PGP7 1564 aa15.36■□□□□ 0.05
RPS3-210ENST00000528439 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
RPS3-210ENST00000528439 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
RPS3-210ENST00000528439 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
RPS3-210ENST00000528439 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
RPS3-210ENST00000528439 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
RPS3-210ENST00000528439 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
RPS3-210ENST00000528439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.34■□□□□ 0.054e-23■□□□□ 10.1
RPS3-210ENST00000528439 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
RPS3-210ENST00000528439 ASXL2Q76L83 1435 aa15.32■□□□□ 0.04
RPS3-210ENST00000528439 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
RPS3-210ENST00000528439 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
RPS3-210ENST00000528439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPS3-210ENST00000528439 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
RPS3-210ENST00000528439 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.043e-45■□□□□ 8.2
RPS3-210ENST00000528439 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms