RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 MYT1Q01538 1121 aa15.14■□□□□ 0.01
MSRA-210ENST00000528246 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
MSRA-210ENST00000528246 DHX57Q6P158 1386 aaKnown RBP15.12■□□□□ 0.01
MSRA-210ENST00000528246 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
MSRA-210ENST00000528246 TOPBP1Q92547 1522 aa15.08■□□□□ 0.01
MSRA-210ENST00000528246 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
MSRA-210ENST00000528246 IFT140Q96RY7 1462 aa15.05■□□□□ 0
MSRA-210ENST00000528246 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ -0
MSRA-210ENST00000528246 MIER1Q8N108 512 aa15.04■□□□□ -0
MSRA-210ENST00000528246 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
MSRA-210ENST00000528246 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
MSRA-210ENST00000528246 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
MSRA-210ENST00000528246 IGF1RP08069 1367 aa14.98□□□□□ -0.01
MSRA-210ENST00000528246 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
MSRA-210ENST00000528246 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
MSRA-210ENST00000528246 CYB5RLQ6IPT4 315 aa14.96□□□□□ -0.01
MSRA-210ENST00000528246 EIF4G3O43432 1585 aaKnown RBP14.96□□□□□ -0.01
MSRA-210ENST00000528246 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
MSRA-210ENST00000528246 CFAP43Q8NDM7 1665 aa14.94□□□□□ -0.02
MSRA-210ENST00000528246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.93□□□□□ -0.02
MSRA-210ENST00000528246 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
MSRA-210ENST00000528246 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
MSRA-210ENST00000528246 TIMELESSQ9UNS1 1208 aa14.92□□□□□ -0.02
MSRA-210ENST00000528246 LRRC9Q6ZRR7 1453 aa14.92□□□□□ -0.02
MSRA-210ENST00000528246 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
MSRA-210ENST00000528246 EFCAB5A4FU69 1503 aa14.91□□□□□ -0.02
MSRA-210ENST00000528246 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
MSRA-210ENST00000528246 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
MSRA-210ENST00000528246 CHD1O14646 1710 aa14.89□□□□□ -0.03
MSRA-210ENST00000528246 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
MSRA-210ENST00000528246 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
MSRA-210ENST00000528246 SETD5Q9C0A6 1442 aa14.87□□□□□ -0.03
MSRA-210ENST00000528246 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
MSRA-210ENST00000528246 FBLN2P98095 1184 aa14.86□□□□□ -0.03
MSRA-210ENST00000528246 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
MSRA-210ENST00000528246 CUL7Q14999 1698 aa14.85□□□□□ -0.03
MSRA-210ENST00000528246 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
MSRA-210ENST00000528246 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
MSRA-210ENST00000528246 ABCA10Q8WWZ4 1543 aa14.84□□□□□ -0.03
MSRA-210ENST00000528246 RANGAP1P46060 587 aaPredicted RBP14.83□□□□□ -0.03
MSRA-210ENST00000528246 CASKIN1Q8WXD9 1431 aa14.8□□□□□ -0.04
MSRA-210ENST00000528246 PCF11O94913 1555 aaKnown RBP14.8□□□□□ -0.04
MSRA-210ENST00000528246 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.04
MSRA-210ENST00000528246 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.05
MSRA-210ENST00000528246 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
MSRA-210ENST00000528246 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
MSRA-210ENST00000528246 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
MSRA-210ENST00000528246 CHMP7Q8WUX9 453 aaPredicted RBP14.74□□□□□ -0.05
MSRA-210ENST00000528246 GRIN2BQ13224 1484 aa14.73□□□□□ -0.05
MSRA-210ENST00000528246 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
MSRA-210ENST00000528246 GAPVD1Q14C86 1478 aa14.7□□□□□ -0.06
MSRA-210ENST00000528246 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
MSRA-210ENST00000528246 SAMD9Q5K651 1589 aa14.68□□□□□ -0.06
MSRA-210ENST00000528246 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
MSRA-210ENST00000528246 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
MSRA-210ENST00000528246 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
MSRA-210ENST00000528246 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
MSRA-210ENST00000528246 FGD6Q6ZV73 1430 aa14.66□□□□□ -0.06
MSRA-210ENST00000528246 HFM1A2PYH4 1435 aa14.66□□□□□ -0.06
MSRA-210ENST00000528246 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
MSRA-210ENST00000528246 CCER2I3L3R5 266 aa14.64□□□□□ -0.07
MSRA-210ENST00000528246 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
MSRA-210ENST00000528246 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
MSRA-210ENST00000528246 PPP1R15AO75807 674 aaPredicted RBP14.61□□□□□ -0.07
MSRA-210ENST00000528246 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
MSRA-210ENST00000528246 ITGAEP38570 1179 aa14.6□□□□□ -0.07
MSRA-210ENST00000528246 AKNAQ7Z591 1439 aa14.6□□□□□ -0.07
MSRA-210ENST00000528246 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
MSRA-210ENST00000528246 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.07
MSRA-210ENST00000528246 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.08
MSRA-210ENST00000528246 CCDC18Q5T9S5 1454 aa14.58□□□□□ -0.08
MSRA-210ENST00000528246 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.08
MSRA-210ENST00000528246 TCOF1Q13428 1488 aaKnown RBP14.55□□□□□ -0.08
MSRA-210ENST00000528246 MTUS2Q5JR59 1369 aa14.54□□□□□ -0.08
MSRA-210ENST00000528246 GRIN2AQ12879 1464 aa14.54□□□□□ -0.08
MSRA-210ENST00000528246 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
MSRA-210ENST00000528246 UGGT2Q9NYU1 1516 aa14.53□□□□□ -0.08
MSRA-210ENST00000528246 NAIPQ13075 1403 aa14.53□□□□□ -0.08
MSRA-210ENST00000528246 NCOA2Q15596 1464 aa14.53□□□□□ -0.08
MSRA-210ENST00000528246 TONSLQ96HA7 1378 aa14.52□□□□□ -0.09
MSRA-210ENST00000528246 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.09
MSRA-210ENST00000528246 LRRIQ1Q96JM4 1722 aa14.51□□□□□ -0.09
MSRA-210ENST00000528246 SIN3AQ96ST3 1273 aa14.51□□□□□ -0.09
MSRA-210ENST00000528246 HECW1Q76N89 1606 aa14.5□□□□□ -0.09
MSRA-210ENST00000528246 CEP170Q5SW79 1584 aa14.49□□□□□ -0.09
MSRA-210ENST00000528246 ANP32CO43423 234 aa14.49□□□□□ -0.09
MSRA-210ENST00000528246 MIA2Q96PC5 1412 aa14.48□□□□□ -0.09
MSRA-210ENST00000528246 NUP160Q12769 1436 aa14.48□□□□□ -0.09
MSRA-210ENST00000528246 PTPRKQ15262 1439 aa14.48□□□□□ -0.09
MSRA-210ENST00000528246 KDM5BQ9UGL1 1544 aa14.47□□□□□ -0.09
MSRA-210ENST00000528246 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
MSRA-210ENST00000528246 P3H3Q8IVL6 736 aa14.46□□□□□ -0.1
MSRA-210ENST00000528246 ERCC6L2Q5T890 1561 aa14.45□□□□□ -0.1
MSRA-210ENST00000528246 TSHZ2Q9NRE2 1034 aa14.45□□□□□ -0.1
MSRA-210ENST00000528246 KIF13AQ9H1H9 1805 aa14.44□□□□□ -0.1
MSRA-210ENST00000528246 ATP1B4Q9UN42 357 aaPredicted RBP14.41□□□□□ -0.1
MSRA-210ENST00000528246 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
MSRA-210ENST00000528246 NEFLP07196 543 aa14.4□□□□□ -0.1
MSRA-210ENST00000528246 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
MSRA-210ENST00000528246 ROCK1Q13464 1354 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms