RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 SHROOM2Q13796 1616 aa29.79■■■□□ 2.36
NXF1-206ENST00000527902 CSRNP3Q8WYN3 585 aa29.75■■■□□ 2.35
NXF1-206ENST00000527902 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
NXF1-206ENST00000527902 KIAA0586Q9BVV6 1533 aa29.72■■■□□ 2.35
NXF1-206ENST00000527902 ERCC6L2Q5T890 1561 aa29.72■■■□□ 2.35
NXF1-206ENST00000527902 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
NXF1-206ENST00000527902 CTTNBP2Q8WZ74 1663 aa29.63■■■□□ 2.33
NXF1-206ENST00000527902 IQGAP2Q13576 1575 aa29.62■■■□□ 2.33
NXF1-206ENST00000527902 JPH4Q96JJ6 628 aa29.62■■■□□ 2.33
NXF1-206ENST00000527902 PRG4Q92954 1404 aaPredicted RBP29.6■■■□□ 2.33
NXF1-206ENST00000527902 KIF21BO75037 1637 aa29.59■■■□□ 2.33
NXF1-206ENST00000527902 CYB5RLQ6IPT4 315 aa29.52■■■□□ 2.32
NXF1-206ENST00000527902 UGGT2Q9NYU1 1516 aa29.46■■■□□ 2.31
NXF1-206ENST00000527902 DISP1Q96F81 1524 aa29.42■■■□□ 2.3
NXF1-206ENST00000527902 GOLGA3Q08378 1498 aa29.37■■■□□ 2.29
NXF1-206ENST00000527902 KIAA0556O60303 1618 aa29.37■■■□□ 2.29
NXF1-206ENST00000527902 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
NXF1-206ENST00000527902 CARMIL2Q6F5E8 1435 aa29.35■■■□□ 2.29
NXF1-206ENST00000527902 TNIKQ9UKE5 1360 aa29.26■■■□□ 2.28
NXF1-206ENST00000527902 SAMD9Q5K651 1589 aa29.25■■■□□ 2.27
NXF1-206ENST00000527902 PTPRGP23470 1445 aa29.23■■■□□ 2.27
NXF1-206ENST00000527902 UBTFP17480 764 aaKnown RBP29.22■■■□□ 2.27
NXF1-206ENST00000527902 TTBK1Q5TCY1 1321 aaPredicted RBP29.2■■■□□ 2.27
NXF1-206ENST00000527902 ADCY10Q96PN6 1610 aa29.2■■■□□ 2.26
NXF1-206ENST00000527902 RANGAP1P46060 587 aaPredicted RBP29.16■■■□□ 2.26
NXF1-206ENST00000527902 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
NXF1-206ENST00000527902 EFCAB5A4FU69 1503 aa29.09■■■□□ 2.25
NXF1-206ENST00000527902 UACAQ9BZF9 1416 aa29.06■■■□□ 2.24
NXF1-206ENST00000527902 ABCC2Q92887 1545 aa29.04■■■□□ 2.24
NXF1-206ENST00000527902 UHRF1BP1LA0JNW5 1464 aa29.04■■■□□ 2.24
NXF1-206ENST00000527902 PLB1Q6P1J6 1458 aa29.04■■■□□ 2.24
NXF1-206ENST00000527902 FHOD3Q2V2M9 1422 aa29.04■■■□□ 2.24
NXF1-206ENST00000527902 ABCA8O94911 1581 aa29.03■■■□□ 2.24
NXF1-206ENST00000527902 ARHGAP35Q9NRY4 1499 aa29.01■■■□□ 2.23
NXF1-206ENST00000527902 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
NXF1-206ENST00000527902 MAPKBP1O60336 1514 aa28.92■■■□□ 2.22
NXF1-206ENST00000527902 KDM5BQ9UGL1 1544 aa28.92■■■□□ 2.22
NXF1-206ENST00000527902 ZCCHC11Q5TAX3 1644 aaKnown RBP28.91■■■□□ 2.22
NXF1-206ENST00000527902 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
NXF1-206ENST00000527902 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
NXF1-206ENST00000527902 CLIP1P30622 1438 aa28.85■■■□□ 2.21
NXF1-206ENST00000527902 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
NXF1-206ENST00000527902 TRHP20396 242 aaPredicted RBP28.82■■■□□ 2.2
NXF1-206ENST00000527902 NUP153P49790 1475 aaKnown RBP28.8■■■□□ 2.2
NXF1-206ENST00000527902 CEP162Q5TB80 1403 aa28.78■■■□□ 2.2
NXF1-206ENST00000527902 ASXL2Q76L83 1435 aa28.78■■■□□ 2.2
NXF1-206ENST00000527902 FMN1Q68DA7 1419 aa28.77■■■□□ 2.2
NXF1-206ENST00000527902 DIP2BQ9P265 1576 aa28.77■■■□□ 2.2
NXF1-206ENST00000527902 ATP10BO94823 1461 aa28.76■■■□□ 2.19
NXF1-206ENST00000527902 ABCC10Q5T3U5 1492 aa28.75■■■□□ 2.19
NXF1-206ENST00000527902 ARID3CA6NKF2 412 aa28.75■■■□□ 2.19
NXF1-206ENST00000527902 PCF11O94913 1555 aaKnown RBP28.69■■■□□ 2.18
NXF1-206ENST00000527902 LRRIQ1Q96JM4 1722 aa28.68■■■□□ 2.18
NXF1-206ENST00000527902 HECW1Q76N89 1606 aa28.68■■■□□ 2.18
NXF1-206ENST00000527902 WDR7Q9Y4E6 1490 aa28.67■■■□□ 2.18
NXF1-206ENST00000527902 CDK13Q14004 1512 aaKnown RBP28.64■■■□□ 2.17
NXF1-206ENST00000527902 FAM69CQ0P6D2 419 aa28.63■■■□□ 2.17
NXF1-206ENST00000527902 EPRSP07814 1512 aaKnown RBP28.63■■■□□ 2.17
NXF1-206ENST00000527902 CASKIN1Q8WXD9 1431 aa28.61■■■□□ 2.17
NXF1-206ENST00000527902 GLI2P10070 1586 aa28.61■■■□□ 2.17
NXF1-206ENST00000527902 ATP1B4Q9UN42 357 aaPredicted RBP28.57■■■□□ 2.16
NXF1-206ENST00000527902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.56■■■□□ 2.16
NXF1-206ENST00000527902 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
NXF1-206ENST00000527902 FYCO1Q9BQS8 1478 aa28.56■■■□□ 2.16
NXF1-206ENST00000527902 TSPOAP1O95153 1857 aa28.55■■■□□ 2.16
NXF1-206ENST00000527902 MAP3K4Q9Y6R4 1608 aa28.53■■■□□ 2.16
NXF1-206ENST00000527902 PPRC1Q5VV67 1664 aaKnown RBP28.51■■■□□ 2.15
NXF1-206ENST00000527902 KCNH8Q96L42 1107 aa28.5■■■□□ 2.15
NXF1-206ENST00000527902 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
NXF1-206ENST00000527902 CFAP43Q8NDM7 1665 aa28.45■■■□□ 2.15
NXF1-206ENST00000527902 ABCA9Q8IUA7 1624 aa28.43■■■□□ 2.14
NXF1-206ENST00000527902 PLEKHD1A6NEE1 506 aa28.43■■■□□ 2.14
NXF1-206ENST00000527902 VPS8Q8N3P4 1428 aa28.42■■■□□ 2.14
NXF1-206ENST00000527902 MAGI3Q5TCQ9 1506 aa28.39■■■□□ 2.14
NXF1-206ENST00000527902 TTC37Q6PGP7 1564 aa28.36■■■□□ 2.13
NXF1-206ENST00000527902 KIF14Q15058 1648 aa28.36■■■□□ 2.13
NXF1-206ENST00000527902 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
NXF1-206ENST00000527902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.35■■■□□ 2.13
NXF1-206ENST00000527902 TROQ12816 1431 aaPredicted RBP28.35■■■□□ 2.13
NXF1-206ENST00000527902 CDK11AQ9UQ88 783 aaPredicted RBP28.32■■■□□ 2.12
NXF1-206ENST00000527902 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
NXF1-206ENST00000527902 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
NXF1-206ENST00000527902 KDM6BO15054 1643 aa28.22■■■□□ 2.11
NXF1-206ENST00000527902 MYO5CQ9NQX4 1742 aa28.21■■■□□ 2.11
NXF1-206ENST00000527902 COL17A1Q9UMD9 1497 aaPredicted RBP28.18■■■□□ 2.1
NXF1-206ENST00000527902 EHBP1L1Q8N3D4 1523 aa28.17■■■□□ 2.1
NXF1-206ENST00000527902 MTUS2Q5JR59 1369 aa28.15■■■□□ 2.1
NXF1-206ENST00000527902 MAP3K1Q13233 1512 aa28.14■■■□□ 2.1
NXF1-206ENST00000527902 CDC42BPAQ5VT25 1732 aa28.13■■■□□ 2.09
NXF1-206ENST00000527902 PLCH2O75038 1416 aa28.13■■■□□ 2.09
NXF1-206ENST00000527902 CDC42BPBQ9Y5S2 1711 aa28.12■■■□□ 2.09
NXF1-206ENST00000527902 NEO1Q92859 1461 aa28.11■■■□□ 2.09
NXF1-206ENST00000527902 PREX2Q70Z35 1606 aa28.1■■■□□ 2.09
NXF1-206ENST00000527902 FANCAO15360 1455 aa28.1■■■□□ 2.09
NXF1-206ENST00000527902 ARAP3Q8WWN8 1544 aa28.1■■■□□ 2.09
NXF1-206ENST00000527902 CFAP74Q9C0B2 1584 aa28.09■■■□□ 2.09
NXF1-206ENST00000527902 LRRC9Q6ZRR7 1453 aa28.08■■■□□ 2.09
NXF1-206ENST00000527902 KANK4Q5T7N3 995 aaPredicted RBP28.05■■■□□ 2.08
NXF1-206ENST00000527902 SUPT6HQ7KZ85 1726 aaKnown RBP28.05■■■□□ 2.08
NXF1-206ENST00000527902 ARHGAP5Q13017 1502 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms