RNA–Protein interactions for RNA: ENST00000527662.5

CSRP1-211, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 4,208 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-211ENST00000527662 IGF1RP08069 1367 aa11.48□□□□□ -0.57
CSRP1-211ENST00000527662 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
CSRP1-211ENST00000527662 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
CSRP1-211ENST00000527662 NEUROD1Q13562 356 aa11.46□□□□□ -0.57
CSRP1-211ENST00000527662 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.58
CSRP1-211ENST00000527662 POLR3GLQ9BT43 218 aa11.46□□□□□ -0.58
CSRP1-211ENST00000527662 POLA1P09884 1462 aaPredicted RBP11.45□□□□□ -0.58
CSRP1-211ENST00000527662 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
CSRP1-211ENST00000527662 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
CSRP1-211ENST00000527662 ZNF326Q5BKZ1 582 aaKnown RBP11.43□□□□□ -0.58
CSRP1-211ENST00000527662 ARID4BQ4LE39 1312 aaPredicted RBP11.43□□□□□ -0.58
CSRP1-211ENST00000527662 CUX1P39880 1505 aa11.42□□□□□ -0.58
CSRP1-211ENST00000527662 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
CSRP1-211ENST00000527662 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
CSRP1-211ENST00000527662 CFDP1Q9UEE9 299 aaPredicted RBP11.41□□□□□ -0.58
CSRP1-211ENST00000527662 MLECQ14165 292 aa11.41□□□□□ -0.58
CSRP1-211ENST00000527662 MYT1Q01538 1121 aa11.4□□□□□ -0.58
CSRP1-211ENST00000527662 RRP7BPQ9NSQ0 103 aa11.4□□□□□ -0.58
CSRP1-211ENST00000527662 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
CSRP1-211ENST00000527662 BCANQ96GW7 911 aa11.4□□□□□ -0.58
CSRP1-211ENST00000527662 FHOD3Q2V2M9 1422 aa11.4□□□□□ -0.58
CSRP1-211ENST00000527662 TSPY4P0CV99 314 aa11.4□□□□□ -0.58
CSRP1-211ENST00000527662 TSPY10P0CW01 314 aa11.4□□□□□ -0.58
CSRP1-211ENST00000527662 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
CSRP1-211ENST00000527662 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
CSRP1-211ENST00000527662 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
CSRP1-211ENST00000527662 CARMIL2Q6F5E8 1435 aa11.38□□□□□ -0.59
CSRP1-211ENST00000527662 PEG3Q9GZU2 1588 aa11.38□□□□□ -0.59
CSRP1-211ENST00000527662 KANK4Q5T7N3 995 aaPredicted RBP11.37□□□□□ -0.59
CSRP1-211ENST00000527662 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
CSRP1-211ENST00000527662 PTPRGP23470 1445 aa11.35□□□□□ -0.59
CSRP1-211ENST00000527662 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
CSRP1-211ENST00000527662 GRIN2BQ13224 1484 aa11.34□□□□□ -0.59
CSRP1-211ENST00000527662 SNAPC4Q5SXM2 1469 aa11.34□□□□□ -0.59
CSRP1-211ENST00000527662 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
CSRP1-211ENST00000527662 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
CSRP1-211ENST00000527662 NEFLP07196 543 aa11.3□□□□□ -0.6
CSRP1-211ENST00000527662 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
CSRP1-211ENST00000527662 DNMBPQ6XZF7 1577 aa11.29□□□□□ -0.6
CSRP1-211ENST00000527662 FHAD1B1AJZ9 1412 aa11.28□□□□□ -0.6
CSRP1-211ENST00000527662 PRG4Q92954 1404 aaPredicted RBP11.27□□□□□ -0.6
CSRP1-211ENST00000527662 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
CSRP1-211ENST00000527662 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
CSRP1-211ENST00000527662 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
CSRP1-211ENST00000527662 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSRP1-211ENST00000527662 GGT6Q6P531 493 aa11.25□□□□□ -0.61
CSRP1-211ENST00000527662 CCNB3Q8WWL7 1395 aa11.24□□□□□ -0.61
CSRP1-211ENST00000527662 TOP2BQ02880 1626 aa11.22□□□□□ -0.61
CSRP1-211ENST00000527662 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
CSRP1-211ENST00000527662 RGL3Q3MIN7 710 aa11.2□□□□□ -0.62
CSRP1-211ENST00000527662 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
CSRP1-211ENST00000527662 KIF21AQ7Z4S6 1674 aa11.19□□□□□ -0.62
CSRP1-211ENST00000527662 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
CSRP1-211ENST00000527662 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
CSRP1-211ENST00000527662 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
CSRP1-211ENST00000527662 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
CSRP1-211ENST00000527662 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
CSRP1-211ENST00000527662 KIF21BO75037 1637 aa11.13□□□□□ -0.63
CSRP1-211ENST00000527662 FOXD1Q16676 465 aa11.13□□□□□ -0.63
CSRP1-211ENST00000527662 SYNJ2O15056 1496 aa11.13□□□□□ -0.63
CSRP1-211ENST00000527662 KIF3BO15066 747 aa11.11□□□□□ -0.63
CSRP1-211ENST00000527662 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
CSRP1-211ENST00000527662 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
CSRP1-211ENST00000527662 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
CSRP1-211ENST00000527662 ANP32CO43423 234 aa11.1□□□□□ -0.63
CSRP1-211ENST00000527662 RAPGEF3O95398 923 aa11.09□□□□□ -0.63
CSRP1-211ENST00000527662 HIRIP3Q9BW71 556 aaPredicted RBP11.09□□□□□ -0.63
CSRP1-211ENST00000527662 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
CSRP1-211ENST00000527662 SPAG9O60271 1321 aaKnown RBP11.08□□□□□ -0.64
CSRP1-211ENST00000527662 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
CSRP1-211ENST00000527662 ARAP1Q96P48 1450 aa11.06□□□□□ -0.64
CSRP1-211ENST00000527662 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
CSRP1-211ENST00000527662 MIER1Q8N108 512 aa11.06□□□□□ -0.64
CSRP1-211ENST00000527662 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
CSRP1-211ENST00000527662 PLB1Q6P1J6 1458 aa11.06□□□□□ -0.64
CSRP1-211ENST00000527662 ERICH6Q7L0X2 663 aa11.05□□□□□ -0.64
CSRP1-211ENST00000527662 SIN3AQ96ST3 1273 aa11.05□□□□□ -0.64
CSRP1-211ENST00000527662 NUTM2DQ5VT03 806 aaPredicted RBP11.05□□□□□ -0.64
CSRP1-211ENST00000527662 TONSLQ96HA7 1378 aa11.04□□□□□ -0.64
CSRP1-211ENST00000527662 ARHGAP35Q9NRY4 1499 aa11.04□□□□□ -0.64
CSRP1-211ENST00000527662 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
CSRP1-211ENST00000527662 C14orf37Q86TY3 774 aa11.02□□□□□ -0.65
CSRP1-211ENST00000527662 WDR62O43379 1518 aa11.02□□□□□ -0.65
CSRP1-211ENST00000527662 AEBP2Q6ZN18 517 aaPredicted RBP11.02□□□□□ -0.65
CSRP1-211ENST00000527662 TIMELESSQ9UNS1 1208 aa11.01□□□□□ -0.65
CSRP1-211ENST00000527662 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
CSRP1-211ENST00000527662 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
CSRP1-211ENST00000527662 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
CSRP1-211ENST00000527662 UACAQ9BZF9 1416 aa10.98□□□□□ -0.65
CSRP1-211ENST00000527662 PKD2Q13563 968 aa10.98□□□□□ -0.65
CSRP1-211ENST00000527662 NUP155O75694 1391 aa10.96□□□□□ -0.65
CSRP1-211ENST00000527662 SAFB2Q14151 953 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSRP1-211ENST00000527662 IQGAP2Q13576 1575 aa10.96□□□□□ -0.66
CSRP1-211ENST00000527662 CDK13Q14004 1512 aaKnown RBP10.96□□□□□ -0.66
CSRP1-211ENST00000527662 SETD5Q9C0A6 1442 aa10.95□□□□□ -0.66
CSRP1-211ENST00000527662 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
CSRP1-211ENST00000527662 PHLDB1Q86UU1 1377 aa10.94□□□□□ -0.66
CSRP1-211ENST00000527662 DDX10Q13206 875 aaKnown RBP10.92□□□□□ -0.66
CSRP1-211ENST00000527662 DCAF11Q8TEB1 546 aa10.92□□□□□ -0.66
CSRP1-211ENST00000527662 STK26Q9P289 416 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms