RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
CAPN1-205ENST00000526954 IQGAP2Q13576 1575 aa26.98■■□□□ 1.91
CAPN1-205ENST00000526954 SHROOM2Q13796 1616 aa26.95■■□□□ 1.91
CAPN1-205ENST00000526954 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.9
CAPN1-205ENST00000526954 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
CAPN1-205ENST00000526954 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
CAPN1-205ENST00000526954 TNIKQ9UKE5 1360 aa26.87■■□□□ 1.89
CAPN1-205ENST00000526954 UGGT2Q9NYU1 1516 aa26.86■■□□□ 1.89
CAPN1-205ENST00000526954 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
CAPN1-205ENST00000526954 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
CAPN1-205ENST00000526954 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
CAPN1-205ENST00000526954 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
CAPN1-205ENST00000526954 DISP1Q96F81 1524 aa26.75■■□□□ 1.87
CAPN1-205ENST00000526954 CARMIL2Q6F5E8 1435 aa26.74■■□□□ 1.87
CAPN1-205ENST00000526954 ERCC6L2Q5T890 1561 aa26.74■■□□□ 1.87
CAPN1-205ENST00000526954 SAMD9Q5K651 1589 aa26.72■■□□□ 1.87
CAPN1-205ENST00000526954 RIMBP3CA6NJZ7 1639 aa26.71■■□□□ 1.87
CAPN1-205ENST00000526954 RIMBP3BA6NNM3 1639 aa26.71■■□□□ 1.87
CAPN1-205ENST00000526954 KIAA0556O60303 1618 aa26.71■■□□□ 1.87
CAPN1-205ENST00000526954 RIMBP3Q9UFD9 1639 aa26.71■■□□□ 1.87
CAPN1-205ENST00000526954 EFCAB5A4FU69 1503 aa26.7■■□□□ 1.86
CAPN1-205ENST00000526954 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
CAPN1-205ENST00000526954 ARHGAP35Q9NRY4 1499 aa26.62■■□□□ 1.85
CAPN1-205ENST00000526954 CEP162Q5TB80 1403 aa26.62■■□□□ 1.85
CAPN1-205ENST00000526954 CLIP1P30622 1438 aa26.61■■□□□ 1.85
CAPN1-205ENST00000526954 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
CAPN1-205ENST00000526954 P3H3Q8IVL6 736 aa26.56■■□□□ 1.84
CAPN1-205ENST00000526954 PTPRGP23470 1445 aa26.55■■□□□ 1.84
CAPN1-205ENST00000526954 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
CAPN1-205ENST00000526954 CYB5RLQ6IPT4 315 aa26.45■■□□□ 1.82
CAPN1-205ENST00000526954 FMN1Q68DA7 1419 aa26.43■■□□□ 1.82
CAPN1-205ENST00000526954 TTBK1Q5TCY1 1321 aaPredicted RBP26.42■■□□□ 1.82
CAPN1-205ENST00000526954 ABCA8O94911 1581 aa26.4■■□□□ 1.82
CAPN1-205ENST00000526954 UACAQ9BZF9 1416 aa26.39■■□□□ 1.82
CAPN1-205ENST00000526954 UHRF1BP1LA0JNW5 1464 aa26.37■■□□□ 1.81
CAPN1-205ENST00000526954 PLB1Q6P1J6 1458 aa26.37■■□□□ 1.81
CAPN1-205ENST00000526954 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
CAPN1-205ENST00000526954 ABCC2Q92887 1545 aa26.35■■□□□ 1.81
CAPN1-205ENST00000526954 ADCY10Q96PN6 1610 aa26.35■■□□□ 1.81
CAPN1-205ENST00000526954 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
CAPN1-205ENST00000526954 CASKIN1Q8WXD9 1431 aa26.28■■□□□ 1.8
CAPN1-205ENST00000526954 PCF11O94913 1555 aaKnown RBP26.26■■□□□ 1.79
CAPN1-205ENST00000526954 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
CAPN1-205ENST00000526954 HECW1Q76N89 1606 aa26.25■■□□□ 1.79
CAPN1-205ENST00000526954 FYCO1Q9BQS8 1478 aa26.24■■□□□ 1.79
CAPN1-205ENST00000526954 KDM5BQ9UGL1 1544 aa26.24■■□□□ 1.79
CAPN1-205ENST00000526954 ZCCHC11Q5TAX3 1644 aaKnown RBP26.17■■□□□ 1.78
CAPN1-205ENST00000526954 ATP10BO94823 1461 aa26.17■■□□□ 1.78
CAPN1-205ENST00000526954 LRRIQ1Q96JM4 1722 aa26.17■■□□□ 1.78
CAPN1-205ENST00000526954 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
CAPN1-205ENST00000526954 EPRSP07814 1512 aaKnown RBP26.15■■□□□ 1.78
CAPN1-205ENST00000526954 ATP1B4Q9UN42 357 aaPredicted RBP26.15■■□□□ 1.78
CAPN1-205ENST00000526954 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
CAPN1-205ENST00000526954 MAPKBP1O60336 1514 aa26.09■■□□□ 1.77
CAPN1-205ENST00000526954 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
CAPN1-205ENST00000526954 ARID3CA6NKF2 412 aa26.09■■□□□ 1.77
CAPN1-205ENST00000526954 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
CAPN1-205ENST00000526954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.03■■□□□ 1.76
CAPN1-205ENST00000526954 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
CAPN1-205ENST00000526954 ASXL2Q76L83 1435 aa26.03■■□□□ 1.76
CAPN1-205ENST00000526954 CFAP43Q8NDM7 1665 aa26.02■■□□□ 1.76
CAPN1-205ENST00000526954 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
CAPN1-205ENST00000526954 CDK11AQ9UQ88 783 aaPredicted RBP25.99■■□□□ 1.75
CAPN1-205ENST00000526954 WDR7Q9Y4E6 1490 aa25.98■■□□□ 1.75
CAPN1-205ENST00000526954 PLEKHD1A6NEE1 506 aa25.98■■□□□ 1.75
CAPN1-205ENST00000526954 APLP2Q06481 763 aa25.94■■□□□ 1.74
CAPN1-205ENST00000526954 MAGI3Q5TCQ9 1506 aa25.93■■□□□ 1.74
CAPN1-205ENST00000526954 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
CAPN1-205ENST00000526954 ABCC10Q5T3U5 1492 aa25.9■■□□□ 1.74
CAPN1-205ENST00000526954 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
CAPN1-205ENST00000526954 MTUS2Q5JR59 1369 aa25.87■■□□□ 1.73
CAPN1-205ENST00000526954 EHBP1L1Q8N3D4 1523 aa25.87■■□□□ 1.73
CAPN1-205ENST00000526954 DIP2BQ9P265 1576 aa25.86■■□□□ 1.73
CAPN1-205ENST00000526954 GLI2P10070 1586 aa25.86■■□□□ 1.73
CAPN1-205ENST00000526954 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
CAPN1-205ENST00000526954 KCNH8Q96L42 1107 aa25.84■■□□□ 1.73
CAPN1-205ENST00000526954 KANK4Q5T7N3 995 aaPredicted RBP25.83■■□□□ 1.73
CAPN1-205ENST00000526954 KIF14Q15058 1648 aa25.82■■□□□ 1.72
CAPN1-205ENST00000526954 ABCA9Q8IUA7 1624 aa25.81■■□□□ 1.72
CAPN1-205ENST00000526954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.78■■□□□ 1.72
CAPN1-205ENST00000526954 FAM69CQ0P6D2 419 aa25.78■■□□□ 1.72
CAPN1-205ENST00000526954 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
CAPN1-205ENST00000526954 MAP3K4Q9Y6R4 1608 aa25.75■■□□□ 1.71
CAPN1-205ENST00000526954 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
CAPN1-205ENST00000526954 TRHP20396 242 aaPredicted RBP25.71■■□□□ 1.71
CAPN1-205ENST00000526954 NCOA2Q15596 1464 aa25.71■■□□□ 1.71
CAPN1-205ENST00000526954 CD109Q6YHK3 1445 aa25.69■■□□□ 1.7
CAPN1-205ENST00000526954 MYO5CQ9NQX4 1742 aa25.68■■□□□ 1.7
CAPN1-205ENST00000526954 CDC42BPAQ5VT25 1732 aa25.66■■□□□ 1.7
CAPN1-205ENST00000526954 PLCH2O75038 1416 aa25.64■■□□□ 1.7
CAPN1-205ENST00000526954 ARAP3Q8WWN8 1544 aa25.64■■□□□ 1.7
CAPN1-205ENST00000526954 GPATCH8Q9UKJ3 1502 aaKnown RBP25.63■■□□□ 1.69
CAPN1-205ENST00000526954 CCNB3Q8WWL7 1395 aa25.63■■□□□ 1.69
CAPN1-205ENST00000526954 PPRC1Q5VV67 1664 aaKnown RBP25.63■■□□□ 1.69
CAPN1-205ENST00000526954 TSPOAP1O95153 1857 aa25.63■■□□□ 1.69
CAPN1-205ENST00000526954 PREX2Q70Z35 1606 aa25.63■■□□□ 1.69
CAPN1-205ENST00000526954 CDC42BPBQ9Y5S2 1711 aa25.62■■□□□ 1.69
CAPN1-205ENST00000526954 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
CAPN1-205ENST00000526954 ITSN2Q9NZM3 1697 aa25.61■■□□□ 1.69
CAPN1-205ENST00000526954 TEX14Q8IWB6 1497 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms