RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CENPBP07199 599 aaPredicted RBP30.07■■■□□ 2.4
SMIM3-201ENST00000526627 PCF11O94913 1555 aaKnown RBP30.07■■■□□ 2.4
SMIM3-201ENST00000526627 CUL7Q14999 1698 aa30.07■■■□□ 2.4
SMIM3-201ENST00000526627 CFAP43Q8NDM7 1665 aa30.06■■■□□ 2.4
SMIM3-201ENST00000526627 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
SMIM3-201ENST00000526627 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
SMIM3-201ENST00000526627 MIER1Q8N108 512 aa30■■■□□ 2.39
SMIM3-201ENST00000526627 PHLDB1Q86UU1 1377 aa30■■■□□ 2.39
SMIM3-201ENST00000526627 EFCAB5A4FU69 1503 aa29.99■■■□□ 2.39
SMIM3-201ENST00000526627 P3H3Q8IVL6 736 aa29.99■■■□□ 2.39
SMIM3-201ENST00000526627 FHOD3Q2V2M9 1422 aa29.98■■■□□ 2.39
SMIM3-201ENST00000526627 CTTNBP2Q8WZ74 1663 aa29.98■■■□□ 2.39
SMIM3-201ENST00000526627 ITGAEP38570 1179 aa29.96■■■□□ 2.39
SMIM3-201ENST00000526627 RAB3GAP2Q9H2M9 1393 aa29.93■■■□□ 2.38
SMIM3-201ENST00000526627 FYCO1Q9BQS8 1478 aa29.93■■■□□ 2.38
SMIM3-201ENST00000526627 ABCA5Q8WWZ7 1642 aa29.91■■■□□ 2.38
SMIM3-201ENST00000526627 AQRO60306 1485 aaKnown RBP eCLIP29.91■■■□□ 2.381e-6■■■■□ 26.1
SMIM3-201ENST00000526627 CASKIN1Q8WXD9 1431 aa29.9■■■□□ 2.38
SMIM3-201ENST00000526627 GTF3C3Q9Y5Q9 886 aa29.86■■■□□ 2.37
SMIM3-201ENST00000526627 MAPKBP1O60336 1514 aa29.85■■■□□ 2.37
SMIM3-201ENST00000526627 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
SMIM3-201ENST00000526627 TDRD9Q8NDG6 1382 aaKnown RBP29.83■■■□□ 2.37
SMIM3-201ENST00000526627 SETD5Q9C0A6 1442 aa29.83■■■□□ 2.37
SMIM3-201ENST00000526627 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
SMIM3-201ENST00000526627 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
SMIM3-201ENST00000526627 ATP1B4Q9UN42 357 aaPredicted RBP29.79■■■□□ 2.36
SMIM3-201ENST00000526627 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
SMIM3-201ENST00000526627 KIF21AQ7Z4S6 1674 aa29.78■■■□□ 2.36
SMIM3-201ENST00000526627 YTHDC1Q96MU7 727 aaKnown RBP29.77■■■□□ 2.36
SMIM3-201ENST00000526627 FMN1Q68DA7 1419 aa29.76■■■□□ 2.36
SMIM3-201ENST00000526627 SAMD9Q5K651 1589 aa29.76■■■□□ 2.35
SMIM3-201ENST00000526627 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
SMIM3-201ENST00000526627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.72■■■□□ 2.35
SMIM3-201ENST00000526627 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
SMIM3-201ENST00000526627 LRRIQ1Q96JM4 1722 aa29.66■■■□□ 2.34
SMIM3-201ENST00000526627 GRIN2BQ13224 1484 aa29.62■■■□□ 2.33
SMIM3-201ENST00000526627 FGD6Q6ZV73 1430 aa29.61■■■□□ 2.33
SMIM3-201ENST00000526627 PELP1Q8IZL8 1130 aaKnown RBP29.58■■■□□ 2.33
SMIM3-201ENST00000526627 THOC2Q8NI27 1593 aaKnown RBP29.55■■■□□ 2.32
SMIM3-201ENST00000526627 MTUS2Q5JR59 1369 aa29.54■■■□□ 2.32
SMIM3-201ENST00000526627 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
SMIM3-201ENST00000526627 SIN3AQ96ST3 1273 aa29.51■■■□□ 2.32
SMIM3-201ENST00000526627 NCOA2Q15596 1464 aa29.48■■■□□ 2.31
SMIM3-201ENST00000526627 PTPRKQ15262 1439 aa29.47■■■□□ 2.31
SMIM3-201ENST00000526627 EHBP1L1Q8N3D4 1523 aa29.44■■■□□ 2.3
SMIM3-201ENST00000526627 MYOM3Q5VTT5 1437 aa29.43■■■□□ 2.3
SMIM3-201ENST00000526627 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
SMIM3-201ENST00000526627 SUPT6HQ7KZ85 1726 aaKnown RBP29.43■■■□□ 2.3
SMIM3-201ENST00000526627 MRC2Q9UBG0 1479 aa29.42■■■□□ 2.3
SMIM3-201ENST00000526627 MAGI3Q5TCQ9 1506 aa29.41■■■□□ 2.3
SMIM3-201ENST00000526627 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
SMIM3-201ENST00000526627 HFM1A2PYH4 1435 aa29.4■■■□□ 2.3
SMIM3-201ENST00000526627 TIMELESSQ9UNS1 1208 aa29.4■■■□□ 2.3
SMIM3-201ENST00000526627 UGGT2Q9NYU1 1516 aa29.38■■■□□ 2.29
SMIM3-201ENST00000526627 IQGAP2Q13576 1575 aa29.38■■■□□ 2.29
SMIM3-201ENST00000526627 CCDC18Q5T9S5 1454 aa29.38■■■□□ 2.29
SMIM3-201ENST00000526627 PTPN23Q9H3S7 1636 aa29.37■■■□□ 2.29
SMIM3-201ENST00000526627 NAIPQ13075 1403 aa29.32■■■□□ 2.28
SMIM3-201ENST00000526627 HECW1Q76N89 1606 aa29.31■■■□□ 2.28
SMIM3-201ENST00000526627 UACAQ9BZF9 1416 aa29.3■■■□□ 2.28
SMIM3-201ENST00000526627 PPP1R15AO75807 674 aaPredicted RBP29.28■■■□□ 2.28
SMIM3-201ENST00000526627 EPRSP07814 1512 aaKnown RBP29.26■■■□□ 2.27
SMIM3-201ENST00000526627 TCOF1Q13428 1488 aaKnown RBP29.25■■■□□ 2.27
SMIM3-201ENST00000526627 ZNF608Q9ULD9 1512 aaPredicted RBP29.24■■■□□ 2.27
SMIM3-201ENST00000526627 IFT140Q96RY7 1462 aa29.23■■■□□ 2.27
SMIM3-201ENST00000526627 WDR62O43379 1518 aa29.23■■■□□ 2.27
SMIM3-201ENST00000526627 CDK13Q14004 1512 aaKnown RBP29.2■■■□□ 2.26
SMIM3-201ENST00000526627 GCC2Q8IWJ2 1684 aa29.13■■■□□ 2.25
SMIM3-201ENST00000526627 DDX10Q13206 875 aaKnown RBP29.12■■■□□ 2.25
SMIM3-201ENST00000526627 TONSLQ96HA7 1378 aa29.12■■■□□ 2.25
SMIM3-201ENST00000526627 KCNH8Q96L42 1107 aa29.11■■■□□ 2.25
SMIM3-201ENST00000526627 KIAA0586Q9BVV6 1533 aa29.11■■■□□ 2.25
SMIM3-201ENST00000526627 MIA2Q96PC5 1412 aa29.1■■■□□ 2.25
SMIM3-201ENST00000526627 DISP1Q96F81 1524 aa29.1■■■□□ 2.25
SMIM3-201ENST00000526627 KIAA0556O60303 1618 aa29.09■■■□□ 2.25
SMIM3-201ENST00000526627 AKNAQ7Z591 1439 aa29.09■■■□□ 2.25
SMIM3-201ENST00000526627 KDM5BQ9UGL1 1544 aa29.08■■■□□ 2.25
SMIM3-201ENST00000526627 RRP7BPQ9NSQ0 103 aa29.06■■■□□ 2.24
SMIM3-201ENST00000526627 HIRIP3Q9BW71 556 aaPredicted RBP29.05■■■□□ 2.24
SMIM3-201ENST00000526627 DENND4BO75064 1496 aaPredicted RBP29.05■■■□□ 2.24
SMIM3-201ENST00000526627 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
SMIM3-201ENST00000526627 KDM6BO15054 1643 aa29.04■■■□□ 2.24
SMIM3-201ENST00000526627 CHIC2Q9UKJ5 165 aa29.04■■■□□ 2.24
SMIM3-201ENST00000526627 GRIN2AQ12879 1464 aa29.03■■■□□ 2.24
SMIM3-201ENST00000526627 ARID3CA6NKF2 412 aa29.02■■■□□ 2.24
SMIM3-201ENST00000526627 NUP153P49790 1475 aaKnown RBP28.99■■■□□ 2.23
SMIM3-201ENST00000526627 RAPGEF6Q8TEU7 1601 aa28.95■■■□□ 2.23
SMIM3-201ENST00000526627 SUPT16HQ9Y5B9 1047 aaKnown RBP28.9■■■□□ 2.22
SMIM3-201ENST00000526627 DAPK1P53355 1430 aa28.89■■■□□ 2.22
SMIM3-201ENST00000526627 MAGI1Q96QZ7 1491 aaPredicted RBP28.89■■■□□ 2.21
SMIM3-201ENST00000526627 DNMT1P26358 1616 aaKnown RBP28.88■■■□□ 2.21
SMIM3-201ENST00000526627 TRIM52Q96A61 297 aa28.87■■■□□ 2.21
SMIM3-201ENST00000526627 ROCK1Q13464 1354 aa28.87■■■□□ 2.21
SMIM3-201ENST00000526627 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
SMIM3-201ENST00000526627 ABCC5O15440 1437 aa28.86■■■□□ 2.21
SMIM3-201ENST00000526627 MPHOSPH9Q99550 1183 aa28.85■■■□□ 2.21
SMIM3-201ENST00000526627 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
SMIM3-201ENST00000526627 CCER2I3L3R5 266 aa28.83■■■□□ 2.21
SMIM3-201ENST00000526627 SYNJ2O15056 1496 aa28.82■■■□□ 2.2
SMIM3-201ENST00000526627 ZNF644Q9H582 1327 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms