RNA–Protein interactions for RNA: ENST00000526481.6

CTSB-211, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-211ENST00000526481 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
CTSB-211ENST00000526481 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
CTSB-211ENST00000526481 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
CTSB-211ENST00000526481 CTTNBP2Q8WZ74 1663 aa23.86■■□□□ 1.41
CTSB-211ENST00000526481 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
CTSB-211ENST00000526481 FBLN2P98095 1184 aa23.82■■□□□ 1.4
CTSB-211ENST00000526481 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
CTSB-211ENST00000526481 NUP160Q12769 1436 aa23.78■■□□□ 1.4
CTSB-211ENST00000526481 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
CTSB-211ENST00000526481 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
CTSB-211ENST00000526481 IQGAP2Q13576 1575 aa23.69■■□□□ 1.38
CTSB-211ENST00000526481 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
CTSB-211ENST00000526481 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
CTSB-211ENST00000526481 TNIKQ9UKE5 1360 aa23.62■■□□□ 1.37
CTSB-211ENST00000526481 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
CTSB-211ENST00000526481 UGGT2Q9NYU1 1516 aa23.54■■□□□ 1.36
CTSB-211ENST00000526481 PPP4R3CPQ6ZMV5 832 aa23.54■■□□□ 1.36
CTSB-211ENST00000526481 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
CTSB-211ENST00000526481 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
CTSB-211ENST00000526481 SAMD9Q5K651 1589 aa23.52■■□□□ 1.36
CTSB-211ENST00000526481 ERCC6L2Q5T890 1561 aa23.51■■□□□ 1.35
CTSB-211ENST00000526481 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
CTSB-211ENST00000526481 KIAA0556O60303 1618 aa23.49■■□□□ 1.35
CTSB-211ENST00000526481 MAPK8IP2Q13387 824 aaPredicted RBP23.49■■□□□ 1.35
CTSB-211ENST00000526481 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
CTSB-211ENST00000526481 DISP1Q96F81 1524 aa23.47■■□□□ 1.35
CTSB-211ENST00000526481 EFCAB5A4FU69 1503 aa23.46■■□□□ 1.35
CTSB-211ENST00000526481 ARHGAP35Q9NRY4 1499 aa23.45■■□□□ 1.34
CTSB-211ENST00000526481 CLIP1P30622 1438 aa23.44■■□□□ 1.34
CTSB-211ENST00000526481 PRG4Q92954 1404 aaPredicted RBP23.42■■□□□ 1.34
CTSB-211ENST00000526481 POTEDQ86YR6 584 aa23.41■■□□□ 1.34
CTSB-211ENST00000526481 JPH4Q96JJ6 628 aa23.41■■□□□ 1.34
CTSB-211ENST00000526481 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
CTSB-211ENST00000526481 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
CTSB-211ENST00000526481 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
CTSB-211ENST00000526481 RIMBP3CA6NJZ7 1639 aa23.35■■□□□ 1.33
CTSB-211ENST00000526481 RIMBP3BA6NNM3 1639 aa23.35■■□□□ 1.33
CTSB-211ENST00000526481 RIMBP3Q9UFD9 1639 aa23.35■■□□□ 1.33
CTSB-211ENST00000526481 CARMIL2Q6F5E8 1435 aa23.33■■□□□ 1.32
CTSB-211ENST00000526481 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
CTSB-211ENST00000526481 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
CTSB-211ENST00000526481 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
CTSB-211ENST00000526481 DMRT2Q9Y5R5 561 aa23.18■■□□□ 1.3
CTSB-211ENST00000526481 LRRIQ1Q96JM4 1722 aa23.18■■□□□ 1.3
CTSB-211ENST00000526481 RAPGEF6Q8TEU7 1601 aa23.18■■□□□ 1.3
CTSB-211ENST00000526481 ABCA8O94911 1581 aa23.18■■□□□ 1.3
CTSB-211ENST00000526481 PTPRGP23470 1445 aa23.16■■□□□ 1.3
CTSB-211ENST00000526481 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
CTSB-211ENST00000526481 PLB1Q6P1J6 1458 aa23.15■■□□□ 1.3
CTSB-211ENST00000526481 FMN1Q68DA7 1419 aa23.15■■□□□ 1.3
CTSB-211ENST00000526481 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
CTSB-211ENST00000526481 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
CTSB-211ENST00000526481 FYCO1Q9BQS8 1478 aa23.09■■□□□ 1.29
CTSB-211ENST00000526481 ABCC2Q92887 1545 aa23.08■■□□□ 1.29
CTSB-211ENST00000526481 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.28
CTSB-211ENST00000526481 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
CTSB-211ENST00000526481 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
CTSB-211ENST00000526481 NUP153P49790 1475 aaKnown RBP23.05■■□□□ 1.28
CTSB-211ENST00000526481 CFAP43Q8NDM7 1665 aa23.04■■□□□ 1.28
CTSB-211ENST00000526481 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.28
CTSB-211ENST00000526481 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
CTSB-211ENST00000526481 ZCCHC11Q5TAX3 1644 aaKnown RBP23■■□□□ 1.27
CTSB-211ENST00000526481 EPRSP07814 1512 aaKnown RBP22.97■■□□□ 1.27
CTSB-211ENST00000526481 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
CTSB-211ENST00000526481 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
CTSB-211ENST00000526481 TIAM1Q13009 1591 aa22.95■■□□□ 1.26
CTSB-211ENST00000526481 CNKSR2Q8WXI2 1034 aa22.94■■□□□ 1.26
CTSB-211ENST00000526481 KDM5BQ9UGL1 1544 aa22.93■■□□□ 1.26
CTSB-211ENST00000526481 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
CTSB-211ENST00000526481 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
CTSB-211ENST00000526481 ATP10BO94823 1461 aa22.92■■□□□ 1.26
CTSB-211ENST00000526481 MAGI3Q5TCQ9 1506 aa22.88■■□□□ 1.25
CTSB-211ENST00000526481 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
CTSB-211ENST00000526481 EHBP1L1Q8N3D4 1523 aa22.79■■□□□ 1.24
CTSB-211ENST00000526481 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
CTSB-211ENST00000526481 KIF14Q15058 1648 aa22.78■■□□□ 1.24
CTSB-211ENST00000526481 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
CTSB-211ENST00000526481 LRRC9Q6ZRR7 1453 aa22.77■■□□□ 1.24
CTSB-211ENST00000526481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
CTSB-211ENST00000526481 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
CTSB-211ENST00000526481 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
CTSB-211ENST00000526481 WDR7Q9Y4E6 1490 aa22.73■■□□□ 1.23
CTSB-211ENST00000526481 KANK4Q5T7N3 995 aaPredicted RBP22.73■■□□□ 1.23
CTSB-211ENST00000526481 TROQ12816 1431 aaPredicted RBP22.73■■□□□ 1.23
CTSB-211ENST00000526481 SUPT6HQ7KZ85 1726 aaKnown RBP22.72■■□□□ 1.23
CTSB-211ENST00000526481 APLP2Q06481 763 aa22.72■■□□□ 1.23
CTSB-211ENST00000526481 MTUS2Q5JR59 1369 aa22.7■■□□□ 1.22
CTSB-211ENST00000526481 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
CTSB-211ENST00000526481 PPARGC1BQ86YN6 1023 aaKnown RBP22.69■■□□□ 1.22
CTSB-211ENST00000526481 TTC37Q6PGP7 1564 aa22.68■■□□□ 1.22
CTSB-211ENST00000526481 DIP2BQ9P265 1576 aa22.66■■□□□ 1.22
CTSB-211ENST00000526481 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
CTSB-211ENST00000526481 NCOA2Q15596 1464 aa22.63■■□□□ 1.21
CTSB-211ENST00000526481 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
CTSB-211ENST00000526481 KCNA4P22459 653 aa22.63■■□□□ 1.21
CTSB-211ENST00000526481 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
CTSB-211ENST00000526481 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
CTSB-211ENST00000526481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.62■■□□□ 1.21
CTSB-211ENST00000526481 ABCC10Q5T3U5 1492 aa22.61■■□□□ 1.21
CTSB-211ENST00000526481 ABCA9Q8IUA7 1624 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms