RNA–Protein interactions for RNA: ENST00000526317.5

CSRP1-208, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 374 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-208ENST00000526317 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
CSRP1-208ENST00000526317 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
CSRP1-208ENST00000526317 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
CSRP1-208ENST00000526317 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
CSRP1-208ENST00000526317 PRXQ9BXM0 1461 aa17.48■□□□□ 0.39
CSRP1-208ENST00000526317 EEA1Q15075 1411 aa17.47■□□□□ 0.39
CSRP1-208ENST00000526317 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
CSRP1-208ENST00000526317 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
CSRP1-208ENST00000526317 PRG4Q92954 1404 aaPredicted RBP17.45■□□□□ 0.38
CSRP1-208ENST00000526317 IQGAP2Q13576 1575 aa17.36■□□□□ 0.37
CSRP1-208ENST00000526317 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
CSRP1-208ENST00000526317 CTTNBP2Q8WZ74 1663 aa17.3■□□□□ 0.36
CSRP1-208ENST00000526317 UGGT2Q9NYU1 1516 aa17.29■□□□□ 0.36
CSRP1-208ENST00000526317 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
CSRP1-208ENST00000526317 DISP1Q96F81 1524 aa17.27■□□□□ 0.36
CSRP1-208ENST00000526317 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.36
CSRP1-208ENST00000526317 KIF21BO75037 1637 aa17.27■□□□□ 0.36
CSRP1-208ENST00000526317 PTPRGP23470 1445 aa17.27■□□□□ 0.35
CSRP1-208ENST00000526317 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.35
CSRP1-208ENST00000526317 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
CSRP1-208ENST00000526317 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
CSRP1-208ENST00000526317 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
CSRP1-208ENST00000526317 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
CSRP1-208ENST00000526317 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
CSRP1-208ENST00000526317 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
CSRP1-208ENST00000526317 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
CSRP1-208ENST00000526317 ADCY10Q96PN6 1610 aa17.14■□□□□ 0.33
CSRP1-208ENST00000526317 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
CSRP1-208ENST00000526317 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
CSRP1-208ENST00000526317 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
CSRP1-208ENST00000526317 PLB1Q6P1J6 1458 aa17.06■□□□□ 0.32
CSRP1-208ENST00000526317 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
CSRP1-208ENST00000526317 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
CSRP1-208ENST00000526317 ABCA8O94911 1581 aa17.03■□□□□ 0.32
CSRP1-208ENST00000526317 LOC105371045A0A1W2PR82 267 aa17.03■□□□□ 0.32
CSRP1-208ENST00000526317 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
CSRP1-208ENST00000526317 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
CSRP1-208ENST00000526317 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
CSRP1-208ENST00000526317 ARHGAP35Q9NRY4 1499 aa16.99■□□□□ 0.31
CSRP1-208ENST00000526317 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
CSRP1-208ENST00000526317 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
CSRP1-208ENST00000526317 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
CSRP1-208ENST00000526317 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.31
CSRP1-208ENST00000526317 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.3
CSRP1-208ENST00000526317 ATP10BO94823 1461 aa16.94■□□□□ 0.3
CSRP1-208ENST00000526317 RAPGEF6Q8TEU7 1601 aa16.93■□□□□ 0.3
CSRP1-208ENST00000526317 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
CSRP1-208ENST00000526317 CLIP1P30622 1438 aa16.9■□□□□ 0.3
CSRP1-208ENST00000526317 FMN1Q68DA7 1419 aa16.9■□□□□ 0.3
CSRP1-208ENST00000526317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
CSRP1-208ENST00000526317 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
CSRP1-208ENST00000526317 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
CSRP1-208ENST00000526317 DIP2BQ9P265 1576 aa16.89■□□□□ 0.3
CSRP1-208ENST00000526317 NUP153P49790 1475 aaKnown RBP16.89■□□□□ 0.29
CSRP1-208ENST00000526317 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
CSRP1-208ENST00000526317 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
CSRP1-208ENST00000526317 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
CSRP1-208ENST00000526317 GLI2P10070 1586 aa16.84■□□□□ 0.29
CSRP1-208ENST00000526317 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
CSRP1-208ENST00000526317 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
CSRP1-208ENST00000526317 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
CSRP1-208ENST00000526317 TSPOAP1O95153 1857 aa16.78■□□□□ 0.28
CSRP1-208ENST00000526317 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.28
CSRP1-208ENST00000526317 HECW1Q76N89 1606 aa16.76■□□□□ 0.27
CSRP1-208ENST00000526317 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
CSRP1-208ENST00000526317 CD109Q6YHK3 1445 aa16.75■□□□□ 0.27
CSRP1-208ENST00000526317 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
CSRP1-208ENST00000526317 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
CSRP1-208ENST00000526317 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
CSRP1-208ENST00000526317 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
CSRP1-208ENST00000526317 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
CSRP1-208ENST00000526317 FYCO1Q9BQS8 1478 aa16.7■□□□□ 0.26
CSRP1-208ENST00000526317 ABCA9Q8IUA7 1624 aa16.68■□□□□ 0.26
CSRP1-208ENST00000526317 MAGI3Q5TCQ9 1506 aa16.68■□□□□ 0.26
CSRP1-208ENST00000526317 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
CSRP1-208ENST00000526317 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
CSRP1-208ENST00000526317 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
CSRP1-208ENST00000526317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
CSRP1-208ENST00000526317 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
CSRP1-208ENST00000526317 COL17A1Q9UMD9 1497 aaPredicted RBP16.62■□□□□ 0.25
CSRP1-208ENST00000526317 KDM6BO15054 1643 aa16.62■□□□□ 0.25
CSRP1-208ENST00000526317 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
CSRP1-208ENST00000526317 PLCH2O75038 1416 aa16.58■□□□□ 0.24
CSRP1-208ENST00000526317 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
CSRP1-208ENST00000526317 KIF14Q15058 1648 aa16.58■□□□□ 0.24
CSRP1-208ENST00000526317 NEO1Q92859 1461 aa16.55■□□□□ 0.24
CSRP1-208ENST00000526317 MTUS2Q5JR59 1369 aa16.55■□□□□ 0.24
CSRP1-208ENST00000526317 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
CSRP1-208ENST00000526317 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
CSRP1-208ENST00000526317 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
CSRP1-208ENST00000526317 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
CSRP1-208ENST00000526317 FANCAO15360 1455 aa16.53■□□□□ 0.24
CSRP1-208ENST00000526317 KANK4Q5T7N3 995 aaPredicted RBP16.5■□□□□ 0.23
CSRP1-208ENST00000526317 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
CSRP1-208ENST00000526317 APLP2Q06481 763 aa16.49■□□□□ 0.23
CSRP1-208ENST00000526317 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
CSRP1-208ENST00000526317 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
CSRP1-208ENST00000526317 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
CSRP1-208ENST00000526317 CDC42BPBQ9Y5S2 1711 aa16.47■□□□□ 0.23
CSRP1-208ENST00000526317 CFAP74Q9C0B2 1584 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms