RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 EIF5BO60841 1220 aaKnown RBP9.55□□□□□ -0.88
TGFBR3-207ENST00000525962 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
TGFBR3-207ENST00000525962 FOXD1Q16676 465 aa9.53□□□□□ -0.88
TGFBR3-207ENST00000525962 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-207ENST00000525962 ARXQ96QS3 562 aa9.52□□□□□ -0.89
TGFBR3-207ENST00000525962 ANP32AP39687 249 aaKnown RBP9.51□□□□□ -0.89
TGFBR3-207ENST00000525962 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
TGFBR3-207ENST00000525962 KDM2AQ9Y2K7 1162 aa9.51□□□□□ -0.89
TGFBR3-207ENST00000525962 MYT1LQ9UL68 1186 aa9.5□□□□□ -0.89
TGFBR3-207ENST00000525962 FBLN2P98095 1184 aa9.5□□□□□ -0.89
TGFBR3-207ENST00000525962 DHX57Q6P158 1386 aaKnown RBP9.49□□□□□ -0.89
TGFBR3-207ENST00000525962 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
TGFBR3-207ENST00000525962 CCNB3Q8WWL7 1395 aa9.47□□□□□ -0.89
TGFBR3-207ENST00000525962 VPS8Q8N3P4 1428 aa9.47□□□□□ -0.89
TGFBR3-207ENST00000525962 CEP164Q9UPV0 1460 aa9.47□□□□□ -0.89
TGFBR3-207ENST00000525962 RAB3GAP2Q9H2M9 1393 aa9.47□□□□□ -0.89
TGFBR3-207ENST00000525962 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
TGFBR3-207ENST00000525962 RAPGEF2Q9Y4G8 1499 aa9.46□□□□□ -0.9
TGFBR3-207ENST00000525962 DEKP35659 375 aaKnown RBP9.45□□□□□ -0.9
TGFBR3-207ENST00000525962 TMC1Q8TDI8 760 aa9.45□□□□□ -0.9
TGFBR3-207ENST00000525962 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.96e-7■■■■■ 31.9
TGFBR3-207ENST00000525962 EEA1Q15075 1411 aa9.43□□□□□ -0.9
TGFBR3-207ENST00000525962 SENP3Q9H4L4 574 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-207ENST00000525962 PRKCSHP14314 528 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-207ENST00000525962 MTUS2Q5JR59 1369 aa9.42□□□□□ -0.9
TGFBR3-207ENST00000525962 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
TGFBR3-207ENST00000525962 PRDM2Q13029 1718 aa9.4□□□□□ -0.91
TGFBR3-207ENST00000525962 SMARCA4P51532 1647 aa9.39□□□□□ -0.91
TGFBR3-207ENST00000525962 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
TGFBR3-207ENST00000525962 PPP4R2Q9NY27 417 aa9.39□□□□□ -0.91
TGFBR3-207ENST00000525962 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.39□□□□□ -0.91
TGFBR3-207ENST00000525962 RGL3Q3MIN7 710 aa9.38□□□□□ -0.91
TGFBR3-207ENST00000525962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.37□□□□□ -0.916e-8■■□□□ 12.3
TGFBR3-207ENST00000525962 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
TGFBR3-207ENST00000525962 BAZ1AQ9NRL2 1556 aaPredicted RBP9.37□□□□□ -0.91
TGFBR3-207ENST00000525962 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-207ENST00000525962 SETD5Q9C0A6 1442 aa9.35□□□□□ -0.91
TGFBR3-207ENST00000525962 CCDC184Q52MB2 194 aa9.34□□□□□ -0.91
TGFBR3-207ENST00000525962 MSH5O43196 834 aa9.34□□□□□ -0.91
TGFBR3-207ENST00000525962 NEFMP07197 916 aa9.34□□□□□ -0.91
TGFBR3-207ENST00000525962 CANXP27824 592 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-207ENST00000525962 CCER2I3L3R5 266 aa9.32□□□□□ -0.92
TGFBR3-207ENST00000525962 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
TGFBR3-207ENST00000525962 RGS3P49796 1198 aa9.31□□□□□ -0.92
TGFBR3-207ENST00000525962 SMARCA2P51531 1590 aa9.3□□□□□ -0.92
TGFBR3-207ENST00000525962 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
TGFBR3-207ENST00000525962 CC2D1BQ5T0F9 858 aaKnown RBP9.3□□□□□ -0.92
TGFBR3-207ENST00000525962 L3MBTL2Q969R5 705 aa9.3□□□□□ -0.92
TGFBR3-207ENST00000525962 HMGXB3Q12766 1538 aa9.3□□□□□ -0.92
TGFBR3-207ENST00000525962 PAK3O75914 559 aaPredicted RBP9.29□□□□□ -0.92
TGFBR3-207ENST00000525962 CUX2O14529 1486 aa9.28□□□□□ -0.92
TGFBR3-207ENST00000525962 CARMIL1Q5VZK9 1371 aa9.27□□□□□ -0.93
TGFBR3-207ENST00000525962 PLIN1O60240 522 aa9.26□□□□□ -0.93
TGFBR3-207ENST00000525962 CARD11Q9BXL7 1154 aa9.26□□□□□ -0.93
TGFBR3-207ENST00000525962 CC2D2AQ9P2K1 1620 aa9.26□□□□□ -0.93
TGFBR3-207ENST00000525962 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
TGFBR3-207ENST00000525962 FHOD3Q2V2M9 1422 aa9.25□□□□□ -0.93
TGFBR3-207ENST00000525962 TOP2AP11388 1531 aaKnown RBP9.24□□□□□ -0.93
TGFBR3-207ENST00000525962 SKAP1Q86WV1 359 aa9.24□□□□□ -0.93
TGFBR3-207ENST00000525962 SPRYD3Q8NCJ5 442 aa9.24□□□□□ -0.93
TGFBR3-207ENST00000525962 PHLDB1Q86UU1 1377 aa9.23□□□□□ -0.93
TGFBR3-207ENST00000525962 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
TGFBR3-207ENST00000525962 KIF21BO75037 1637 aa9.23□□□□□ -0.93
TGFBR3-207ENST00000525962 CHGAP10645 457 aaKnown RBP9.22□□□□□ -0.93
TGFBR3-207ENST00000525962 TNNT2P45379 298 aaPredicted RBP9.22□□□□□ -0.93
TGFBR3-207ENST00000525962 ANO8Q9HCE9 1232 aaPredicted RBP9.22□□□□□ -0.93
TGFBR3-207ENST00000525962 DCAF11Q8TEB1 546 aa9.22□□□□□ -0.93
TGFBR3-207ENST00000525962 PRKRIP1Q9H875 184 aaPredicted RBP9.22□□□□□ -0.93
TGFBR3-207ENST00000525962 ARAP1Q96P48 1450 aa9.21□□□□□ -0.94
TGFBR3-207ENST00000525962 WASHC2AQ641Q2 1341 aa9.21□□□□□ -0.94
TGFBR3-207ENST00000525962 EXOC6Q8TAG9 804 aa9.21□□□□□ -0.94
TGFBR3-207ENST00000525962 IL27Q8NEV9 243 aa9.2□□□□□ -0.94
TGFBR3-207ENST00000525962 ARID4BQ4LE39 1312 aaPredicted RBP9.2□□□□□ -0.94
TGFBR3-207ENST00000525962 WDR43Q15061 677 aaKnown RBP eCLIP9.19□□□□□ -0.94
TGFBR3-207ENST00000525962 TDRD9Q8NDG6 1382 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-207ENST00000525962 IPO9Q96P70 1041 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-207ENST00000525962 CFDP1Q9UEE9 299 aaPredicted RBP9.18□□□□□ -0.94
TGFBR3-207ENST00000525962 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
TGFBR3-207ENST00000525962 PKD2Q13563 968 aa9.17□□□□□ -0.94
TGFBR3-207ENST00000525962 FRAT1Q92837 279 aaPredicted RBP9.17□□□□□ -0.94
TGFBR3-207ENST00000525962 C11orf95C9JLR9 678 aaPredicted RBP9.17□□□□□ -0.94
TGFBR3-207ENST00000525962 ARHGAP35Q9NRY4 1499 aa9.17□□□□□ -0.94
TGFBR3-207ENST00000525962 TSPY4P0CV99 314 aa9.16□□□□□ -0.94
TGFBR3-207ENST00000525962 TSPY10P0CW01 314 aa9.16□□□□□ -0.94
TGFBR3-207ENST00000525962 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
TGFBR3-207ENST00000525962 RCAN3Q9UKA8 241 aa9.16□□□□□ -0.94
TGFBR3-207ENST00000525962 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
TGFBR3-207ENST00000525962 SLKQ9H2G2 1235 aaPredicted RBP9.15□□□□□ -0.94
TGFBR3-207ENST00000525962 NUDCQ9Y266 331 aa9.15□□□□□ -0.94
TGFBR3-207ENST00000525962 SYNJ1O43426 1573 aa9.15□□□□□ -0.94
TGFBR3-207ENST00000525962 ZNF644Q9H582 1327 aaPredicted RBP9.15□□□□□ -0.94
TGFBR3-207ENST00000525962 HSP90AA1P07900 732 aaKnown RBP9.15□□□□□ -0.95
TGFBR3-207ENST00000525962 AKNAQ7Z591 1439 aa9.14□□□□□ -0.95
TGFBR3-207ENST00000525962 GZF1Q9H116 711 aaPredicted RBP9.13□□□□□ -0.95
TGFBR3-207ENST00000525962 ST20-MTHFSA0A0A6YYL1 179 aa9.13□□□□□ -0.95
TGFBR3-207ENST00000525962 SLC24A1O60721 1099 aa9.13□□□□□ -0.95
TGFBR3-207ENST00000525962 NCAPD3P42695 1498 aa9.13□□□□□ -0.95
TGFBR3-207ENST00000525962 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
TGFBR3-207ENST00000525962 PDE4AP27815 886 aa9.12□□□□□ -0.95
TGFBR3-207ENST00000525962 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms