RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 DMRT2Q9Y5R5 561 aa10.86□□□□□ -0.67
CD44-214ENST00000525211 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
CD44-214ENST00000525211 FBLN2P98095 1184 aa10.85□□□□□ -0.67
CD44-214ENST00000525211 CARMIL1Q5VZK9 1371 aa10.84□□□□□ -0.67
CD44-214ENST00000525211 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
CD44-214ENST00000525211 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
CD44-214ENST00000525211 CHD1O14646 1710 aa10.83□□□□□ -0.68
CD44-214ENST00000525211 SYNJ2O15056 1496 aa10.82□□□□□ -0.68
CD44-214ENST00000525211 PRXQ9BXM0 1461 aa10.82□□□□□ -0.68
CD44-214ENST00000525211 CHMP7Q8WUX9 453 aaPredicted RBP10.81□□□□□ -0.68
CD44-214ENST00000525211 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
CD44-214ENST00000525211 RAPGEF2Q9Y4G8 1499 aa10.8□□□□□ -0.68
CD44-214ENST00000525211 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
CD44-214ENST00000525211 EEA1Q15075 1411 aa10.78□□□□□ -0.68
CD44-214ENST00000525211 CUL7Q14999 1698 aa10.77□□□□□ -0.69
CD44-214ENST00000525211 LOC105371045A0A1W2PR82 267 aa10.77□□□□□ -0.69
CD44-214ENST00000525211 ZBTB22O15209 634 aa10.76□□□□□ -0.69
CD44-214ENST00000525211 HOXD11P31277 338 aaPredicted RBP10.76□□□□□ -0.69
CD44-214ENST00000525211 NUP160Q12769 1436 aa10.75□□□□□ -0.69
CD44-214ENST00000525211 OSCARQ8IYS5 282 aa10.74□□□□□ -0.69
CD44-214ENST00000525211 CLASP1Q7Z460 1538 aa10.73□□□□□ -0.69
CD44-214ENST00000525211 KIF21BO75037 1637 aa10.71□□□□□ -0.69
CD44-214ENST00000525211 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
CD44-214ENST00000525211 KIAA0586Q9BVV6 1533 aa10.67□□□□□ -0.7
CD44-214ENST00000525211 GOLGA3Q08378 1498 aa10.67□□□□□ -0.7
CD44-214ENST00000525211 RANGAP1P46060 587 aaPredicted RBP10.66□□□□□ -0.7
CD44-214ENST00000525211 JPH4Q96JJ6 628 aa10.66□□□□□ -0.7
CD44-214ENST00000525211 UBTFP17480 764 aaKnown RBP10.65□□□□□ -0.7
CD44-214ENST00000525211 SHROOM2Q13796 1616 aa10.63□□□□□ -0.71
CD44-214ENST00000525211 IQGAP2Q13576 1575 aa10.62□□□□□ -0.71
CD44-214ENST00000525211 PRG4Q92954 1404 aaPredicted RBP10.62□□□□□ -0.71
CD44-214ENST00000525211 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
CD44-214ENST00000525211 CTTNBP2Q8WZ74 1663 aa10.62□□□□□ -0.71
CD44-214ENST00000525211 DISP1Q96F81 1524 aa10.62□□□□□ -0.71
CD44-214ENST00000525211 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
CD44-214ENST00000525211 ARHGEF11O15085 1522 aa10.61□□□□□ -0.71
CD44-214ENST00000525211 UGGT2Q9NYU1 1516 aa10.6□□□□□ -0.71
CD44-214ENST00000525211 TNIKQ9UKE5 1360 aa10.6□□□□□ -0.71
CD44-214ENST00000525211 RIMBP3CA6NJZ7 1639 aa10.59□□□□□ -0.71
CD44-214ENST00000525211 RIMBP3BA6NNM3 1639 aa10.59□□□□□ -0.71
CD44-214ENST00000525211 RIMBP3Q9UFD9 1639 aa10.59□□□□□ -0.71
CD44-214ENST00000525211 ARAP1Q96P48 1450 aa10.58□□□□□ -0.72
CD44-214ENST00000525211 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
CD44-214ENST00000525211 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
CD44-214ENST00000525211 FHOD3Q2V2M9 1422 aa10.55□□□□□ -0.72
CD44-214ENST00000525211 KIAA0556O60303 1618 aa10.55□□□□□ -0.72
CD44-214ENST00000525211 SAMD9Q5K651 1589 aa10.54□□□□□ -0.72
CD44-214ENST00000525211 CEP162Q5TB80 1403 aa10.53□□□□□ -0.72
CD44-214ENST00000525211 CYB5RLQ6IPT4 315 aa10.53□□□□□ -0.72
CD44-214ENST00000525211 SLC4A2P04920 1241 aa10.52□□□□□ -0.73
CD44-214ENST00000525211 CLIP1P30622 1438 aa10.5□□□□□ -0.73
CD44-214ENST00000525211 PTPRGP23470 1445 aa10.5□□□□□ -0.73
CD44-214ENST00000525211 CARMIL2Q6F5E8 1435 aa10.49□□□□□ -0.73
CD44-214ENST00000525211 PLB1Q6P1J6 1458 aa10.49□□□□□ -0.73
CD44-214ENST00000525211 ARID3CA6NKF2 412 aa10.46□□□□□ -0.73
CD44-214ENST00000525211 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
CD44-214ENST00000525211 ADCY10Q96PN6 1610 aa10.44□□□□□ -0.74
CD44-214ENST00000525211 ABCA8O94911 1581 aa10.44□□□□□ -0.74
CD44-214ENST00000525211 UACAQ9BZF9 1416 aa10.42□□□□□ -0.74
CD44-214ENST00000525211 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
CD44-214ENST00000525211 PCF11O94913 1555 aaKnown RBP10.39□□□□□ -0.75
CD44-214ENST00000525211 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
CD44-214ENST00000525211 ATP10BO94823 1461 aa10.39□□□□□ -0.75
CD44-214ENST00000525211 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
CD44-214ENST00000525211 RAPGEF6Q8TEU7 1601 aa10.39□□□□□ -0.75
CD44-214ENST00000525211 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
CD44-214ENST00000525211 CDK13Q14004 1512 aaKnown RBP10.38□□□□□ -0.75
CD44-214ENST00000525211 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
CD44-214ENST00000525211 ATP1B4Q9UN42 357 aaPredicted RBP10.38□□□□□ -0.75
CD44-214ENST00000525211 FMN1Q68DA7 1419 aa10.36□□□□□ -0.75
CD44-214ENST00000525211 CASKIN1Q8WXD9 1431 aa10.36□□□□□ -0.75
CD44-214ENST00000525211 KDM5BQ9UGL1 1544 aa10.36□□□□□ -0.75
CD44-214ENST00000525211 VPS8Q8N3P4 1428 aa10.35□□□□□ -0.75
CD44-214ENST00000525211 ZCCHC11Q5TAX3 1644 aaKnown RBP10.35□□□□□ -0.75
CD44-214ENST00000525211 MAGI3Q5TCQ9 1506 aa10.33□□□□□ -0.76
CD44-214ENST00000525211 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
CD44-214ENST00000525211 FYCO1Q9BQS8 1478 aa10.32□□□□□ -0.76
CD44-214ENST00000525211 MYCNP04198 464 aaPredicted RBP10.32□□□□□ -0.76
CD44-214ENST00000525211 ASXL2Q76L83 1435 aa10.32□□□□□ -0.76
CD44-214ENST00000525211 KANK4Q5T7N3 995 aaPredicted RBP10.31□□□□□ -0.76
CD44-214ENST00000525211 HECW1Q76N89 1606 aa10.3□□□□□ -0.76
CD44-214ENST00000525211 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
CD44-214ENST00000525211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.29□□□□□ -0.76
CD44-214ENST00000525211 HNRNPUL2Q1KMD3 747 aaKnown RBP10.29□□□□□ -0.76
CD44-214ENST00000525211 KCNH8Q96L42 1107 aa10.28□□□□□ -0.76
CD44-214ENST00000525211 NPM1P06748 294 aaKnown RBP eCLIP10.27□□□□□ -0.77
CD44-214ENST00000525211 MAPKBP1O60336 1514 aa10.27□□□□□ -0.77
CD44-214ENST00000525211 WDR7Q9Y4E6 1490 aa10.25□□□□□ -0.77
CD44-214ENST00000525211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.77
CD44-214ENST00000525211 TIAM1Q13009 1591 aa10.25□□□□□ -0.77
CD44-214ENST00000525211 KIF14Q15058 1648 aa10.24□□□□□ -0.77
CD44-214ENST00000525211 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
CD44-214ENST00000525211 CCDC18Q5T9S5 1454 aa10.23□□□□□ -0.77
CD44-214ENST00000525211 DIP2BQ9P265 1576 aa10.23□□□□□ -0.77
CD44-214ENST00000525211 CFAP43Q8NDM7 1665 aa10.23□□□□□ -0.77
CD44-214ENST00000525211 PLEKHD1A6NEE1 506 aa10.23□□□□□ -0.77
CD44-214ENST00000525211 FAM69CQ0P6D2 419 aa10.23□□□□□ -0.77
CD44-214ENST00000525211 TROQ12816 1431 aaPredicted RBP10.23□□□□□ -0.77
CD44-214ENST00000525211 LRRC9Q6ZRR7 1453 aa10.22□□□□□ -0.77
CD44-214ENST00000525211 KIF13AQ9H1H9 1805 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms