RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
CSDE1-209ENST00000525132 GABBR2O75899 941 aa8.07□□□□□ -1.12
CSDE1-209ENST00000525132 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
CSDE1-209ENST00000525132 SPDYE2Q495Y8 402 aa8.07□□□□□ -1.12
CSDE1-209ENST00000525132 PITPNM1O00562 1244 aa8.05□□□□□ -1.12
CSDE1-209ENST00000525132 THOC2Q8NI27 1593 aaKnown RBP8.04□□□□□ -1.12
CSDE1-209ENST00000525132 ARAP1Q96P48 1450 aa8.03□□□□□ -1.12
CSDE1-209ENST00000525132 SPDYE4A6NLX3 237 aa8.01□□□□□ -1.13
CSDE1-209ENST00000525132 FKBP8Q14318 412 aa7.99□□□□□ -1.13
CSDE1-209ENST00000525132 ZNF692Q9BU19 519 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-209ENST00000525132 NACADO15069 1562 aa7.93□□□□□ -1.14
CSDE1-209ENST00000525132 NESP48681 1621 aa7.91□□□□□ -1.14
CSDE1-209ENST00000525132 OTUD5Q96G74 571 aa7.9□□□□□ -1.14
CSDE1-209ENST00000525132 CCDC180Q9P1Z9 1646 aa7.89□□□□□ -1.15
CSDE1-209ENST00000525132 POTEIP0CG38 1075 aa7.89□□□□□ -1.15
CSDE1-209ENST00000525132 CERKQ8TCT0 537 aa7.89□□□□□ -1.15
CSDE1-209ENST00000525132 C19orf67A6NJJ6 358 aa7.87□□□□□ -1.15
CSDE1-209ENST00000525132 SMARCA2P51531 1590 aa7.83□□□□□ -1.16
CSDE1-209ENST00000525132 ADGRL1O94910 1474 aa7.82□□□□□ -1.16
CSDE1-209ENST00000525132 SHROOM4Q9ULL8 1493 aa7.81□□□□□ -1.16
CSDE1-209ENST00000525132 DCAF8L2P0C7V8 631 aa7.8□□□□□ -1.16
CSDE1-209ENST00000525132 PRKAR2AP13861 404 aaKnown RBP7.79□□□□□ -1.16
CSDE1-209ENST00000525132 SPDYE1Q8NFV5 336 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-209ENST00000525132 STAG3Q9UJ98 1225 aa7.73□□□□□ -1.17
CSDE1-209ENST00000525132 SLC34A2O95436 690 aa7.71□□□□□ -1.18
CSDE1-209ENST00000525132 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-209ENST00000525132 FBXO3Q9UK99 471 aa7.68□□□□□ -1.18
CSDE1-209ENST00000525132 CREBZFQ9NS37 354 aa7.67□□□□□ -1.18
CSDE1-209ENST00000525132 SRCAPQ6ZRS2 3230 aa7.67□□□□□ -1.18
CSDE1-209ENST00000525132 MNX1P50219 401 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-209ENST00000525132 VASPP50552 380 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-209ENST00000525132 CHADLQ6NUI6 762 aa7.65□□□□□ -1.18
CSDE1-209ENST00000525132 CLEC11AQ9Y240 323 aa7.65□□□□□ -1.18
CSDE1-209ENST00000525132 KIF21AQ7Z4S6 1674 aa7.64□□□□□ -1.19
CSDE1-209ENST00000525132 PRR29P0C7W0 189 aa7.63□□□□□ -1.19
CSDE1-209ENST00000525132 MMRN1Q13201 1228 aa7.61□□□□□ -1.19
CSDE1-209ENST00000525132 RSF1Q96T23 1441 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-209ENST00000525132 POTEB2H3BUK9 544 aa7.59□□□□□ -1.19
CSDE1-209ENST00000525132 IFNLR1Q8IU57 520 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-209ENST00000525132 CDAN1Q8IWY9 1227 aa7.59□□□□□ -1.19
CSDE1-209ENST00000525132 KDM6BO15054 1643 aa7.59□□□□□ -1.19
CSDE1-209ENST00000525132 KIF13AQ9H1H9 1805 aa7.57□□□□□ -1.2
CSDE1-209ENST00000525132 MED1Q15648 1581 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-209ENST00000525132 WDR62O43379 1518 aa7.54□□□□□ -1.2
CSDE1-209ENST00000525132 FARP1Q9Y4F1 1045 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-209ENST00000525132 MRC2Q9UBG0 1479 aa7.53□□□□□ -1.2
CSDE1-209ENST00000525132 FAM163AQ96GL9 167 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-209ENST00000525132 MIER1Q8N108 512 aa7.51□□□□□ -1.21
CSDE1-209ENST00000525132 DCBLD2Q96PD2 775 aa7.51□□□□□ -1.21
CSDE1-209ENST00000525132 NUBP1P53384 320 aa7.5□□□□□ -1.21
CSDE1-209ENST00000525132 PDS5BQ9NTI5 1447 aa7.5□□□□□ -1.21
CSDE1-209ENST00000525132 CD44P16070 742 aaKnown RBP7.48□□□□□ -1.21
CSDE1-209ENST00000525132 PLCD3Q8N3E9 789 aa7.48□□□□□ -1.21
CSDE1-209ENST00000525132 FAM69CQ0P6D2 419 aa7.47□□□□□ -1.21
CSDE1-209ENST00000525132 SPNS2Q8IVW8 549 aa7.45□□□□□ -1.22
CSDE1-209ENST00000525132 CLCN6P51797 869 aa7.44□□□□□ -1.22
CSDE1-209ENST00000525132 ZBTB47Q9UFB7 747 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-209ENST00000525132 LAMC3Q9Y6N6 1575 aa7.43□□□□□ -1.22
CSDE1-209ENST00000525132 RASEFQ8IZ41 740 aa7.43□□□□□ -1.22
CSDE1-209ENST00000525132 SPOCK2Q92563 424 aa7.42□□□□□ -1.22
CSDE1-209ENST00000525132 HSPA2P54652 639 aa7.41□□□□□ -1.22
CSDE1-209ENST00000525132 PLEKHG5O94827 1062 aa7.4□□□□□ -1.22
CSDE1-209ENST00000525132 NPM1P06748 294 aaKnown RBP eCLIP7.4□□□□□ -1.22
CSDE1-209ENST00000525132 POTEJP0CG39 1038 aa7.4□□□□□ -1.22
CSDE1-209ENST00000525132 NCAPD3P42695 1498 aa7.4□□□□□ -1.22
CSDE1-209ENST00000525132 SCRIBQ14160 1630 aa7.4□□□□□ -1.22
CSDE1-209ENST00000525132 GALR2O43603 387 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-209ENST00000525132 PELP1Q8IZL8 1130 aaKnown RBP7.38□□□□□ -1.23
CSDE1-209ENST00000525132 CCDC61Q9Y6R9 512 aa7.38□□□□□ -1.23
CSDE1-209ENST00000525132 PCF11O94913 1555 aaKnown RBP7.37□□□□□ -1.23
CSDE1-209ENST00000525132 GAPVD1Q14C86 1478 aa7.36□□□□□ -1.23
CSDE1-209ENST00000525132 CHD1O14646 1710 aa7.36□□□□□ -1.23
CSDE1-209ENST00000525132 SENP3-EIF4A1A0A087X0R7 540 aa7.36□□□□□ -1.23
CSDE1-209ENST00000525132 ZNF579Q8NAF0 562 aaKnown RBP7.36□□□□□ -1.23
CSDE1-209ENST00000525132 RGS17Q9UGC6 210 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-209ENST00000525132 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
CSDE1-209ENST00000525132 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
CSDE1-209ENST00000525132 PKD2Q13563 968 aa7.35□□□□□ -1.23
CSDE1-209ENST00000525132 KLHL34Q8N239 644 aa7.35□□□□□ -1.23
CSDE1-209ENST00000525132 RBM33Q96EV2 1170 aaKnown RBP7.35□□□□□ -1.23
CSDE1-209ENST00000525132 LTBP4Q8N2S1 1624 aa7.33□□□□□ -1.24
CSDE1-209ENST00000525132 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-209ENST00000525132 UPF1Q92900 1129 aaKnown RBP eCLIP7.32□□□□□ -1.24
CSDE1-209ENST00000525132 CHRM1P11229 460 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-209ENST00000525132 FAM212AQ96EL1 285 aa7.31□□□□□ -1.24
CSDE1-209ENST00000525132 ABCC10Q5T3U5 1492 aa7.3□□□□□ -1.24
CSDE1-209ENST00000525132 HSPA1LP34931 641 aa7.3□□□□□ -1.24
CSDE1-209ENST00000525132 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
CSDE1-209ENST00000525132 ZRANB1Q9UGI0 708 aa7.3□□□□□ -1.24
CSDE1-209ENST00000525132 GSE1Q14687 1217 aa7.29□□□□□ -1.24
CSDE1-209ENST00000525132 AMER1Q5JTC6 1135 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-209ENST00000525132 TSPOAP1O95153 1857 aa7.28□□□□□ -1.24
CSDE1-209ENST00000525132 RNF25Q96BH1 459 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-209ENST00000525132 KIF12Q96FN5 646 aa7.27□□□□□ -1.25
CSDE1-209ENST00000525132 TSPYL2Q9H2G4 693 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-209ENST00000525132 CEP164Q9UPV0 1460 aa7.26□□□□□ -1.25
CSDE1-209ENST00000525132 UBAP1LF5GYI3 381 aa7.26□□□□□ -1.25
CSDE1-209ENST00000525132 PHF12Q96QT6 1004 aa7.26□□□□□ -1.25
CSDE1-209ENST00000525132 POTEAQ6S8J7 498 aa7.25□□□□□ -1.25
CSDE1-209ENST00000525132 MAMSTRQ6ZN01 415 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms