RNA–Protein interactions for RNA: ENST00000525009.5

ATG13-204, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-204ENST00000525009 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATG13-204ENST00000525009 CLIP1P30622 1438 aa16.84■□□□□ 0.29
ATG13-204ENST00000525009 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
ATG13-204ENST00000525009 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
ATG13-204ENST00000525009 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
ATG13-204ENST00000525009 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
ATG13-204ENST00000525009 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
ATG13-204ENST00000525009 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
ATG13-204ENST00000525009 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
ATG13-204ENST00000525009 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
ATG13-204ENST00000525009 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
ATG13-204ENST00000525009 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
ATG13-204ENST00000525009 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
ATG13-204ENST00000525009 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
ATG13-204ENST00000525009 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
ATG13-204ENST00000525009 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
ATG13-204ENST00000525009 SYNJ2O15056 1496 aa16.62■□□□□ 0.25
ATG13-204ENST00000525009 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
ATG13-204ENST00000525009 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
ATG13-204ENST00000525009 APLP2Q06481 763 aa16.6■□□□□ 0.25
ATG13-204ENST00000525009 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
ATG13-204ENST00000525009 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
ATG13-204ENST00000525009 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
ATG13-204ENST00000525009 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
ATG13-204ENST00000525009 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
ATG13-204ENST00000525009 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
ATG13-204ENST00000525009 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
ATG13-204ENST00000525009 NUP160Q12769 1436 aa16.49■□□□□ 0.23
ATG13-204ENST00000525009 UGGT2Q9NYU1 1516 aa16.49■□□□□ 0.23
ATG13-204ENST00000525009 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
ATG13-204ENST00000525009 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
ATG13-204ENST00000525009 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
ATG13-204ENST00000525009 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
ATG13-204ENST00000525009 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
ATG13-204ENST00000525009 MAP3K1Q13233 1512 aa16.43■□□□□ 0.22
ATG13-204ENST00000525009 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
ATG13-204ENST00000525009 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
ATG13-204ENST00000525009 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
ATG13-204ENST00000525009 FYCO1Q9BQS8 1478 aa16.41■□□□□ 0.22
ATG13-204ENST00000525009 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
ATG13-204ENST00000525009 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
ATG13-204ENST00000525009 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
ATG13-204ENST00000525009 CARMIL2Q6F5E8 1435 aa16.37■□□□□ 0.21
ATG13-204ENST00000525009 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
ATG13-204ENST00000525009 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
ATG13-204ENST00000525009 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
ATG13-204ENST00000525009 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
ATG13-204ENST00000525009 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
ATG13-204ENST00000525009 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
ATG13-204ENST00000525009 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
ATG13-204ENST00000525009 CCDC18Q5T9S5 1454 aa16.28■□□□□ 0.2
ATG13-204ENST00000525009 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
ATG13-204ENST00000525009 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
ATG13-204ENST00000525009 KDM6BO15054 1643 aa16.26■□□□□ 0.19
ATG13-204ENST00000525009 SHROOM2Q13796 1616 aa16.26■□□□□ 0.19
ATG13-204ENST00000525009 EPRSP07814 1512 aaKnown RBP16.22■□□□□ 0.19
ATG13-204ENST00000525009 MTUS2Q5JR59 1369 aa16.22■□□□□ 0.19
ATG13-204ENST00000525009 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
ATG13-204ENST00000525009 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
ATG13-204ENST00000525009 PTPRGP23470 1445 aa16.19■□□□□ 0.18
ATG13-204ENST00000525009 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
ATG13-204ENST00000525009 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
ATG13-204ENST00000525009 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
ATG13-204ENST00000525009 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
ATG13-204ENST00000525009 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
ATG13-204ENST00000525009 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
ATG13-204ENST00000525009 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
ATG13-204ENST00000525009 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
ATG13-204ENST00000525009 ABCA8O94911 1581 aa16.15■□□□□ 0.18
ATG13-204ENST00000525009 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
ATG13-204ENST00000525009 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.17
ATG13-204ENST00000525009 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
ATG13-204ENST00000525009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
ATG13-204ENST00000525009 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
ATG13-204ENST00000525009 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
ATG13-204ENST00000525009 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
ATG13-204ENST00000525009 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
ATG13-204ENST00000525009 ARID3CA6NKF2 412 aa16.12■□□□□ 0.17
ATG13-204ENST00000525009 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
ATG13-204ENST00000525009 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
ATG13-204ENST00000525009 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
ATG13-204ENST00000525009 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
ATG13-204ENST00000525009 HRCP23327 699 aa16.08■□□□□ 0.16
ATG13-204ENST00000525009 ADCY10Q96PN6 1610 aa16.08■□□□□ 0.16
ATG13-204ENST00000525009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATG13-204ENST00000525009 ATP10BO94823 1461 aa16.06■□□□□ 0.16
ATG13-204ENST00000525009 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
ATG13-204ENST00000525009 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
ATG13-204ENST00000525009 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
ATG13-204ENST00000525009 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
ATG13-204ENST00000525009 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
ATG13-204ENST00000525009 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
ATG13-204ENST00000525009 ABCC2Q92887 1545 aa16.01■□□□□ 0.15
ATG13-204ENST00000525009 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
ATG13-204ENST00000525009 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
ATG13-204ENST00000525009 MIA2Q96PC5 1412 aa16■□□□□ 0.15
ATG13-204ENST00000525009 ITGAEP38570 1179 aa15.98■□□□□ 0.15
ATG13-204ENST00000525009 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
ATG13-204ENST00000525009 TCOF1Q13428 1488 aaKnown RBP15.95■□□□□ 0.14
ATG13-204ENST00000525009 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms