RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
TRAPPC4-204ENST00000524797 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
TRAPPC4-204ENST00000524797 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
TRAPPC4-204ENST00000524797 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC4-204ENST00000524797 RAPGEF2Q9Y4G8 1499 aa19.05■□□□□ 0.64
TRAPPC4-204ENST00000524797 IQGAP2Q13576 1575 aa19.05■□□□□ 0.64
TRAPPC4-204ENST00000524797 ADCY10Q96PN6 1610 aa18.98■□□□□ 0.63
TRAPPC4-204ENST00000524797 CTTNBP2Q8WZ74 1663 aa18.98■□□□□ 0.63
TRAPPC4-204ENST00000524797 CARMIL2Q6F5E8 1435 aa18.95■□□□□ 0.62
TRAPPC4-204ENST00000524797 PRXQ9BXM0 1461 aa18.93■□□□□ 0.62
TRAPPC4-204ENST00000524797 UGGT2Q9NYU1 1516 aa18.93■□□□□ 0.62
TRAPPC4-204ENST00000524797 KIF13AQ9H1H9 1805 aa18.93■□□□□ 0.62
TRAPPC4-204ENST00000524797 DISP1Q96F81 1524 aa18.92■□□□□ 0.62
TRAPPC4-204ENST00000524797 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
TRAPPC4-204ENST00000524797 PTPRGP23470 1445 aa18.9■□□□□ 0.62
TRAPPC4-204ENST00000524797 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
TRAPPC4-204ENST00000524797 MAPKBP1O60336 1514 aa18.88■□□□□ 0.61
TRAPPC4-204ENST00000524797 NPM1P06748 294 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRAPPC4-204ENST00000524797 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC4-204ENST00000524797 EEA1Q15075 1411 aa18.83■□□□□ 0.6
TRAPPC4-204ENST00000524797 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
TRAPPC4-204ENST00000524797 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
TRAPPC4-204ENST00000524797 DIP2BQ9P265 1576 aa18.81■□□□□ 0.6
TRAPPC4-204ENST00000524797 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
TRAPPC4-204ENST00000524797 ABCC2Q92887 1545 aa18.79■□□□□ 0.6
TRAPPC4-204ENST00000524797 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
TRAPPC4-204ENST00000524797 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
TRAPPC4-204ENST00000524797 FAM69CQ0P6D2 419 aa18.74■□□□□ 0.59
TRAPPC4-204ENST00000524797 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
TRAPPC4-204ENST00000524797 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
TRAPPC4-204ENST00000524797 KDM5BQ9UGL1 1544 aa18.71■□□□□ 0.59
TRAPPC4-204ENST00000524797 KIF21BO75037 1637 aa18.7■□□□□ 0.58
TRAPPC4-204ENST00000524797 TSPOAP1O95153 1857 aa18.7■□□□□ 0.58
TRAPPC4-204ENST00000524797 ABCA8O94911 1581 aa18.69■□□□□ 0.58
TRAPPC4-204ENST00000524797 ASXL2Q76L83 1435 aa18.69■□□□□ 0.58
TRAPPC4-204ENST00000524797 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC4-204ENST00000524797 PLB1Q6P1J6 1458 aa18.69■□□□□ 0.58
TRAPPC4-204ENST00000524797 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
TRAPPC4-204ENST00000524797 GLI2P10070 1586 aa18.66■□□□□ 0.58
TRAPPC4-204ENST00000524797 PPRC1Q5VV67 1664 aaKnown RBP18.61■□□□□ 0.57
TRAPPC4-204ENST00000524797 EPRSP07814 1512 aaKnown RBP18.6■□□□□ 0.57
TRAPPC4-204ENST00000524797 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
TRAPPC4-204ENST00000524797 MAP3K4Q9Y6R4 1608 aa18.58■□□□□ 0.56
TRAPPC4-204ENST00000524797 KDM6BO15054 1643 aa18.57■□□□□ 0.56
TRAPPC4-204ENST00000524797 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
TRAPPC4-204ENST00000524797 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
TRAPPC4-204ENST00000524797 EFCAB5A4FU69 1503 aa18.53■□□□□ 0.56
TRAPPC4-204ENST00000524797 FHOD3Q2V2M9 1422 aa18.51■□□□□ 0.55
TRAPPC4-204ENST00000524797 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-204ENST00000524797 ATP10BO94823 1461 aa18.5■□□□□ 0.55
TRAPPC4-204ENST00000524797 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
TRAPPC4-204ENST00000524797 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
TRAPPC4-204ENST00000524797 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
TRAPPC4-204ENST00000524797 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
TRAPPC4-204ENST00000524797 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
TRAPPC4-204ENST00000524797 NUP153P49790 1475 aaKnown RBP18.44■□□□□ 0.54
TRAPPC4-204ENST00000524797 KCNH8Q96L42 1107 aa18.43■□□□□ 0.54
TRAPPC4-204ENST00000524797 MAGI3Q5TCQ9 1506 aa18.41■□□□□ 0.54
TRAPPC4-204ENST00000524797 CD109Q6YHK3 1445 aa18.4■□□□□ 0.54
TRAPPC4-204ENST00000524797 ABCA9Q8IUA7 1624 aa18.39■□□□□ 0.53
TRAPPC4-204ENST00000524797 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
TRAPPC4-204ENST00000524797 COL17A1Q9UMD9 1497 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-204ENST00000524797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC4-204ENST00000524797 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
TRAPPC4-204ENST00000524797 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC4-204ENST00000524797 HECW1Q76N89 1606 aa18.32■□□□□ 0.52
TRAPPC4-204ENST00000524797 FMN1Q68DA7 1419 aa18.32■□□□□ 0.52
TRAPPC4-204ENST00000524797 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
TRAPPC4-204ENST00000524797 LRRIQ1Q96JM4 1722 aa18.27■□□□□ 0.52
TRAPPC4-204ENST00000524797 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.51
TRAPPC4-204ENST00000524797 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
TRAPPC4-204ENST00000524797 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRAPPC4-204ENST00000524797 TTC37Q6PGP7 1564 aa18.23■□□□□ 0.51
TRAPPC4-204ENST00000524797 NEO1Q92859 1461 aa18.22■□□□□ 0.51
TRAPPC4-204ENST00000524797 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
TRAPPC4-204ENST00000524797 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
TRAPPC4-204ENST00000524797 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC4-204ENST00000524797 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
TRAPPC4-204ENST00000524797 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
TRAPPC4-204ENST00000524797 CLIP1P30622 1438 aa18.18■□□□□ 0.5
TRAPPC4-204ENST00000524797 CASKIN1Q8WXD9 1431 aa18.17■□□□□ 0.5
TRAPPC4-204ENST00000524797 FRMPD1Q5SYB0 1578 aa18.17■□□□□ 0.5
TRAPPC4-204ENST00000524797 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
TRAPPC4-204ENST00000524797 KIF14Q15058 1648 aa18.16■□□□□ 0.5
TRAPPC4-204ENST00000524797 MYO5CQ9NQX4 1742 aa18.15■□□□□ 0.5
TRAPPC4-204ENST00000524797 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC4-204ENST00000524797 RICTORQ6R327 1708 aa18.13■□□□□ 0.49
TRAPPC4-204ENST00000524797 FANCAO15360 1455 aa18.13■□□□□ 0.49
TRAPPC4-204ENST00000524797 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC4-204ENST00000524797 CCDC18Q5T9S5 1454 aa18.13■□□□□ 0.49
TRAPPC4-204ENST00000524797 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
TRAPPC4-204ENST00000524797 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
TRAPPC4-204ENST00000524797 PLCH2O75038 1416 aa18.1■□□□□ 0.49
TRAPPC4-204ENST00000524797 RAPGEF3O95398 923 aa18.1■□□□□ 0.49
TRAPPC4-204ENST00000524797 DENND4BO75064 1496 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-204ENST00000524797 ZMYM4Q5VZL5 1548 aa18.04■□□□□ 0.48
TRAPPC4-204ENST00000524797 ARHGEF40Q8TER5 1519 aa18.04■□□□□ 0.48
TRAPPC4-204ENST00000524797 CDC42BPBQ9Y5S2 1711 aa18.04■□□□□ 0.48
TRAPPC4-204ENST00000524797 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
TRAPPC4-204ENST00000524797 PREX2Q70Z35 1606 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms