RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
NPAS4-202ENST00000524617 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
NPAS4-202ENST00000524617 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
NPAS4-202ENST00000524617 CTTNBP2Q8WZ74 1663 aa12.88□□□□□ -0.35
NPAS4-202ENST00000524617 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
NPAS4-202ENST00000524617 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
NPAS4-202ENST00000524617 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
NPAS4-202ENST00000524617 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
NPAS4-202ENST00000524617 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
NPAS4-202ENST00000524617 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
NPAS4-202ENST00000524617 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
NPAS4-202ENST00000524617 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
NPAS4-202ENST00000524617 DISP1Q96F81 1524 aa12.79□□□□□ -0.36
NPAS4-202ENST00000524617 KIAA0556O60303 1618 aa12.78□□□□□ -0.36
NPAS4-202ENST00000524617 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
NPAS4-202ENST00000524617 SAMD9Q5K651 1589 aa12.77□□□□□ -0.36
NPAS4-202ENST00000524617 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
NPAS4-202ENST00000524617 EFCAB5A4FU69 1503 aa12.75□□□□□ -0.37
NPAS4-202ENST00000524617 CARMIL2Q6F5E8 1435 aa12.75□□□□□ -0.37
NPAS4-202ENST00000524617 UBTFP17480 764 aaKnown RBP12.71□□□□□ -0.37
NPAS4-202ENST00000524617 ARHGAP35Q9NRY4 1499 aa12.69□□□□□ -0.38
NPAS4-202ENST00000524617 PTPRGP23470 1445 aa12.66□□□□□ -0.38
NPAS4-202ENST00000524617 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
NPAS4-202ENST00000524617 CLIP1P30622 1438 aa12.64□□□□□ -0.39
NPAS4-202ENST00000524617 FHOD3Q2V2M9 1422 aa12.64□□□□□ -0.39
NPAS4-202ENST00000524617 CEP162Q5TB80 1403 aa12.64□□□□□ -0.39
NPAS4-202ENST00000524617 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
NPAS4-202ENST00000524617 ABCA8O94911 1581 aa12.64□□□□□ -0.39
NPAS4-202ENST00000524617 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
NPAS4-202ENST00000524617 ADCY10Q96PN6 1610 aa12.62□□□□□ -0.39
NPAS4-202ENST00000524617 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
NPAS4-202ENST00000524617 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
NPAS4-202ENST00000524617 CYB5RLQ6IPT4 315 aa12.6□□□□□ -0.39
NPAS4-202ENST00000524617 PLB1Q6P1J6 1458 aa12.59□□□□□ -0.39
NPAS4-202ENST00000524617 FMN1Q68DA7 1419 aa12.59□□□□□ -0.39
NPAS4-202ENST00000524617 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
NPAS4-202ENST00000524617 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
NPAS4-202ENST00000524617 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
NPAS4-202ENST00000524617 RANGAP1P46060 587 aaPredicted RBP12.55□□□□□ -0.4
NPAS4-202ENST00000524617 NUP153P49790 1475 aaKnown RBP12.54□□□□□ -0.4
NPAS4-202ENST00000524617 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
NPAS4-202ENST00000524617 CASKIN1Q8WXD9 1431 aa12.53□□□□□ -0.4
NPAS4-202ENST00000524617 PCF11O94913 1555 aaKnown RBP12.52□□□□□ -0.4
NPAS4-202ENST00000524617 HECW1Q76N89 1606 aa12.52□□□□□ -0.4
NPAS4-202ENST00000524617 FYCO1Q9BQS8 1478 aa12.52□□□□□ -0.41
NPAS4-202ENST00000524617 ZCCHC11Q5TAX3 1644 aaKnown RBP12.51□□□□□ -0.41
NPAS4-202ENST00000524617 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
NPAS4-202ENST00000524617 ATP10BO94823 1461 aa12.49□□□□□ -0.41
NPAS4-202ENST00000524617 TTBK1Q5TCY1 1321 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-202ENST00000524617 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
NPAS4-202ENST00000524617 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
NPAS4-202ENST00000524617 LRRIQ1Q96JM4 1722 aa12.45□□□□□ -0.42
NPAS4-202ENST00000524617 ASXL2Q76L83 1435 aa12.45□□□□□ -0.42
NPAS4-202ENST00000524617 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
NPAS4-202ENST00000524617 WDR7Q9Y4E6 1490 aa12.44□□□□□ -0.42
NPAS4-202ENST00000524617 NPM1P06748 294 aaKnown RBP eCLIP12.43□□□□□ -0.42
NPAS4-202ENST00000524617 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
NPAS4-202ENST00000524617 DIP2BQ9P265 1576 aa12.42□□□□□ -0.42
NPAS4-202ENST00000524617 GLI2P10070 1586 aa12.41□□□□□ -0.42
NPAS4-202ENST00000524617 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
NPAS4-202ENST00000524617 CFAP43Q8NDM7 1665 aa12.4□□□□□ -0.42
NPAS4-202ENST00000524617 TIAM1Q13009 1591 aa12.38□□□□□ -0.43
NPAS4-202ENST00000524617 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
NPAS4-202ENST00000524617 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
NPAS4-202ENST00000524617 KIF13AQ9H1H9 1805 aa12.35□□□□□ -0.43
NPAS4-202ENST00000524617 ARID3CA6NKF2 412 aa12.35□□□□□ -0.43
NPAS4-202ENST00000524617 ABCA9Q8IUA7 1624 aa12.34□□□□□ -0.43
NPAS4-202ENST00000524617 EHBP1L1Q8N3D4 1523 aa12.34□□□□□ -0.43
NPAS4-202ENST00000524617 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
NPAS4-202ENST00000524617 MAP3K4Q9Y6R4 1608 aa12.33□□□□□ -0.43
NPAS4-202ENST00000524617 PLEKHD1A6NEE1 506 aa12.33□□□□□ -0.44
NPAS4-202ENST00000524617 KIF14Q15058 1648 aa12.33□□□□□ -0.44
NPAS4-202ENST00000524617 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
NPAS4-202ENST00000524617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
NPAS4-202ENST00000524617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
NPAS4-202ENST00000524617 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
NPAS4-202ENST00000524617 LRRC9Q6ZRR7 1453 aa12.31□□□□□ -0.44
NPAS4-202ENST00000524617 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
NPAS4-202ENST00000524617 ARAP3Q8WWN8 1544 aa12.29□□□□□ -0.44
NPAS4-202ENST00000524617 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
NPAS4-202ENST00000524617 MTUS2Q5JR59 1369 aa12.29□□□□□ -0.44
NPAS4-202ENST00000524617 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
NPAS4-202ENST00000524617 CD109Q6YHK3 1445 aa12.26□□□□□ -0.45
NPAS4-202ENST00000524617 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
NPAS4-202ENST00000524617 KCNH8Q96L42 1107 aa12.25□□□□□ -0.45
NPAS4-202ENST00000524617 TEX14Q8IWB6 1497 aa12.25□□□□□ -0.45
NPAS4-202ENST00000524617 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
NPAS4-202ENST00000524617 PLCH2O75038 1416 aa12.24□□□□□ -0.45
NPAS4-202ENST00000524617 PREX2Q70Z35 1606 aa12.23□□□□□ -0.45
NPAS4-202ENST00000524617 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
NPAS4-202ENST00000524617 KANK4Q5T7N3 995 aaPredicted RBP12.23□□□□□ -0.45
NPAS4-202ENST00000524617 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
NPAS4-202ENST00000524617 NEO1Q92859 1461 aa12.22□□□□□ -0.45
NPAS4-202ENST00000524617 CFAP74Q9C0B2 1584 aa12.22□□□□□ -0.45
NPAS4-202ENST00000524617 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.45
NPAS4-202ENST00000524617 APLP2Q06481 763 aa12.21□□□□□ -0.45
NPAS4-202ENST00000524617 CDC42BPAQ5VT25 1732 aa12.2□□□□□ -0.46
NPAS4-202ENST00000524617 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
NPAS4-202ENST00000524617 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
NPAS4-202ENST00000524617 CDC42BPBQ9Y5S2 1711 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms