RNA–Protein interactions for RNA: ENST00000523908.5

CLINT1-207, Transcript of clathrin interactor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLINT1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-207ENST00000523908 LAMC3Q9Y6N6 1575 aa28.82■■■□□ 2.2
CLINT1-207ENST00000523908 LRRC9Q6ZRR7 1453 aa28.8■■■□□ 2.2
CLINT1-207ENST00000523908 PELP1Q8IZL8 1130 aaKnown RBP28.79■■■□□ 2.2
CLINT1-207ENST00000523908 WDR97A6NE52 1622 aa28.78■■■□□ 2.2
CLINT1-207ENST00000523908 AQRO60306 1485 aaKnown RBP eCLIP28.75■■■□□ 2.192e-6■■■■□ 25
CLINT1-207ENST00000523908 CTTNBP2Q8WZ74 1663 aa28.75■■■□□ 2.19
CLINT1-207ENST00000523908 PCF11O94913 1555 aaKnown RBP28.74■■■□□ 2.19
CLINT1-207ENST00000523908 FYCO1Q9BQS8 1478 aa28.72■■■□□ 2.19
CLINT1-207ENST00000523908 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
CLINT1-207ENST00000523908 NESP48681 1621 aa28.65■■■□□ 2.18
CLINT1-207ENST00000523908 CASKIN1Q8WXD9 1431 aa28.64■■■□□ 2.17
CLINT1-207ENST00000523908 ABCA5Q8WWZ7 1642 aa28.63■■■□□ 2.17
CLINT1-207ENST00000523908 URB2Q14146 1524 aaKnown RBP28.61■■■□□ 2.17
CLINT1-207ENST00000523908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.6■■■□□ 2.17
CLINT1-207ENST00000523908 PHLDB1Q86UU1 1377 aa28.58■■■□□ 2.17
CLINT1-207ENST00000523908 MIER1Q8N108 512 aa28.58■■■□□ 2.17
CLINT1-207ENST00000523908 RAB3GAP2Q9H2M9 1393 aa28.57■■■□□ 2.16
CLINT1-207ENST00000523908 SETD5Q9C0A6 1442 aa28.55■■■□□ 2.16
CLINT1-207ENST00000523908 MAPKBP1O60336 1514 aa28.55■■■□□ 2.16
CLINT1-207ENST00000523908 FMN1Q68DA7 1419 aa28.54■■■□□ 2.16
CLINT1-207ENST00000523908 FHOD3Q2V2M9 1422 aa28.53■■■□□ 2.16
CLINT1-207ENST00000523908 GTF3C3Q9Y5Q9 886 aa28.53■■■□□ 2.16
CLINT1-207ENST00000523908 SAMD9Q5K651 1589 aa28.53■■■□□ 2.16
CLINT1-207ENST00000523908 PDS5BQ9NTI5 1447 aa28.51■■■□□ 2.15
CLINT1-207ENST00000523908 THOC2Q8NI27 1593 aaKnown RBP28.48■■■□□ 2.15
CLINT1-207ENST00000523908 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
CLINT1-207ENST00000523908 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.14
CLINT1-207ENST00000523908 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
CLINT1-207ENST00000523908 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
CLINT1-207ENST00000523908 ITGAEP38570 1179 aa28.36■■■□□ 2.13
CLINT1-207ENST00000523908 P3H3Q8IVL6 736 aa28.33■■■□□ 2.13
CLINT1-207ENST00000523908 GRIN2BQ13224 1484 aa28.33■■■□□ 2.13
CLINT1-207ENST00000523908 TIMELESSQ9UNS1 1208 aa28.32■■■□□ 2.12
CLINT1-207ENST00000523908 FGD6Q6ZV73 1430 aa28.32■■■□□ 2.12
CLINT1-207ENST00000523908 FAM50AQ14320 339 aaKnown RBP28.29■■■□□ 2.12
CLINT1-207ENST00000523908 LRRIQ1Q96JM4 1722 aa28.28■■■□□ 2.12
CLINT1-207ENST00000523908 TDRD9Q8NDG6 1382 aaKnown RBP28.28■■■□□ 2.12
CLINT1-207ENST00000523908 YTHDC1Q96MU7 727 aaKnown RBP28.27■■■□□ 2.12
CLINT1-207ENST00000523908 EHBP1L1Q8N3D4 1523 aa28.27■■■□□ 2.12
CLINT1-207ENST00000523908 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
CLINT1-207ENST00000523908 SUPT6HQ7KZ85 1726 aaKnown RBP28.23■■■□□ 2.11
CLINT1-207ENST00000523908 MTUS2Q5JR59 1369 aa28.21■■■□□ 2.11
CLINT1-207ENST00000523908 CCDC18Q5T9S5 1454 aa28.2■■■□□ 2.11
CLINT1-207ENST00000523908 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
CLINT1-207ENST00000523908 ATP1B4Q9UN42 357 aaPredicted RBP28.19■■■□□ 2.1
CLINT1-207ENST00000523908 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
CLINT1-207ENST00000523908 MYOM3Q5VTT5 1437 aa28.17■■■□□ 2.1
CLINT1-207ENST00000523908 NCOA2Q15596 1464 aa28.17■■■□□ 2.1
CLINT1-207ENST00000523908 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
CLINT1-207ENST00000523908 UGGT2Q9NYU1 1516 aa28.14■■■□□ 2.1
CLINT1-207ENST00000523908 HECW1Q76N89 1606 aa28.14■■■□□ 2.09
CLINT1-207ENST00000523908 PTPN23Q9H3S7 1636 aa28.14■■■□□ 2.09
CLINT1-207ENST00000523908 IQGAP2Q13576 1575 aa28.11■■■□□ 2.09
CLINT1-207ENST00000523908 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
CLINT1-207ENST00000523908 UACAQ9BZF9 1416 aa28.09■■■□□ 2.09
CLINT1-207ENST00000523908 TCOF1Q13428 1488 aaKnown RBP28.07■■■□□ 2.08
CLINT1-207ENST00000523908 PTPRKQ15262 1439 aa28.04■■■□□ 2.08
CLINT1-207ENST00000523908 NAIPQ13075 1403 aa28.02■■■□□ 2.08
CLINT1-207ENST00000523908 AKNAQ7Z591 1439 aa28.02■■■□□ 2.08
CLINT1-207ENST00000523908 MAGI3Q5TCQ9 1506 aa28.01■■■□□ 2.07
CLINT1-207ENST00000523908 SIN3AQ96ST3 1273 aa28■■■□□ 2.07
CLINT1-207ENST00000523908 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
CLINT1-207ENST00000523908 WDR62O43379 1518 aa27.97■■■□□ 2.07
CLINT1-207ENST00000523908 PPP1R15AO75807 674 aaPredicted RBP27.96■■■□□ 2.07
CLINT1-207ENST00000523908 IFT140Q96RY7 1462 aa27.96■■■□□ 2.07
CLINT1-207ENST00000523908 EPRSP07814 1512 aaKnown RBP27.95■■■□□ 2.07
CLINT1-207ENST00000523908 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.06
CLINT1-207ENST00000523908 MIA2Q96PC5 1412 aa27.93■■■□□ 2.06
CLINT1-207ENST00000523908 TONSLQ96HA7 1378 aa27.87■■■□□ 2.05
CLINT1-207ENST00000523908 KIAA0586Q9BVV6 1533 aa27.83■■■□□ 2.05
CLINT1-207ENST00000523908 KIAA0556O60303 1618 aa27.82■■■□□ 2.04
CLINT1-207ENST00000523908 KDM5BQ9UGL1 1544 aa27.79■■■□□ 2.04
CLINT1-207ENST00000523908 CDK13Q14004 1512 aaKnown RBP27.78■■■□□ 2.04
CLINT1-207ENST00000523908 DISP1Q96F81 1524 aa27.75■■■□□ 2.03
CLINT1-207ENST00000523908 ZNF608Q9ULD9 1512 aaPredicted RBP27.73■■■□□ 2.03
CLINT1-207ENST00000523908 GRIN2AQ12879 1464 aa27.72■■■□□ 2.03
CLINT1-207ENST00000523908 CCER2I3L3R5 266 aa27.72■■■□□ 2.03
CLINT1-207ENST00000523908 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
CLINT1-207ENST00000523908 ROCK1Q13464 1354 aa27.71■■■□□ 2.03
CLINT1-207ENST00000523908 RAPGEF6Q8TEU7 1601 aa27.71■■■□□ 2.03
CLINT1-207ENST00000523908 DDX10Q13206 875 aaKnown RBP27.7■■■□□ 2.03
CLINT1-207ENST00000523908 DENND4BO75064 1496 aaPredicted RBP27.69■■■□□ 2.02
CLINT1-207ENST00000523908 DNMT1P26358 1616 aaKnown RBP27.68■■■□□ 2.02
CLINT1-207ENST00000523908 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
CLINT1-207ENST00000523908 NUP153P49790 1475 aaKnown RBP27.66■■■□□ 2.02
CLINT1-207ENST00000523908 SUPT16HQ9Y5B9 1047 aaKnown RBP27.64■■■□□ 2.02
CLINT1-207ENST00000523908 KDM6BO15054 1643 aa27.64■■■□□ 2.01
CLINT1-207ENST00000523908 DAPK1P53355 1430 aa27.61■■■□□ 2.01
CLINT1-207ENST00000523908 ANP32CO43423 234 aa27.57■■■□□ 2
CLINT1-207ENST00000523908 RRP7BPQ9NSQ0 103 aa27.57■■■□□ 2
CLINT1-207ENST00000523908 ADCY10Q96PN6 1610 aa27.57■■■□□ 2
CLINT1-207ENST00000523908 ITSN2Q9NZM3 1697 aa27.57■■■□□ 2
CLINT1-207ENST00000523908 KCNH8Q96L42 1107 aa27.56■■■□□ 2
CLINT1-207ENST00000523908 SYNJ2O15056 1496 aa27.54■■■□□ 2
CLINT1-207ENST00000523908 ABCC5O15440 1437 aa27.54■■■□□ 2
CLINT1-207ENST00000523908 CDK11AQ9UQ88 783 aaPredicted RBP27.53■■■□□ 2
CLINT1-207ENST00000523908 TROQ12816 1431 aaPredicted RBP27.52■■■□□ 2
CLINT1-207ENST00000523908 CEP170Q5SW79 1584 aa27.51■■□□□ 1.99
CLINT1-207ENST00000523908 CHIC2Q9UKJ5 165 aa27.5■■□□□ 1.99
CLINT1-207ENST00000523908 MPHOSPH9Q99550 1183 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms