RNA–Protein interactions for RNA: ENST00000523712.5

CA1-220, Transcript of carbonic anhydrase 1, humanhuman

TSL 2

Gene CA1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA1-220ENST00000523712 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
CA1-220ENST00000523712 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
CA1-220ENST00000523712 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
CA1-220ENST00000523712 CHD1O14646 1710 aa12.22□□□□□ -0.45
CA1-220ENST00000523712 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
CA1-220ENST00000523712 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
CA1-220ENST00000523712 GRIN2AQ12879 1464 aa12.21□□□□□ -0.46
CA1-220ENST00000523712 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
CA1-220ENST00000523712 PRXQ9BXM0 1461 aa12.16□□□□□ -0.46
CA1-220ENST00000523712 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
CA1-220ENST00000523712 KIF21BO75037 1637 aa12.14□□□□□ -0.47
CA1-220ENST00000523712 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
CA1-220ENST00000523712 CEP170Q5SW79 1584 aa12.11□□□□□ -0.47
CA1-220ENST00000523712 NUP160Q12769 1436 aa12.1□□□□□ -0.47
CA1-220ENST00000523712 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
CA1-220ENST00000523712 CTTNBP2Q8WZ74 1663 aa12.06□□□□□ -0.48
CA1-220ENST00000523712 IQGAP2Q13576 1575 aa12.06□□□□□ -0.48
CA1-220ENST00000523712 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
CA1-220ENST00000523712 LOC105371045A0A1W2PR82 267 aa12.05□□□□□ -0.48
CA1-220ENST00000523712 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
CA1-220ENST00000523712 TTBK1Q5TCY1 1321 aaPredicted RBP12.05□□□□□ -0.48
CA1-220ENST00000523712 CARMIL2Q6F5E8 1435 aa12.02□□□□□ -0.49
CA1-220ENST00000523712 PRG4Q92954 1404 aaPredicted RBP12.02□□□□□ -0.49
CA1-220ENST00000523712 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
CA1-220ENST00000523712 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
CA1-220ENST00000523712 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
CA1-220ENST00000523712 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
CA1-220ENST00000523712 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
CA1-220ENST00000523712 ARHGEF11O15085 1522 aa11.96□□□□□ -0.49
CA1-220ENST00000523712 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.5
CA1-220ENST00000523712 CLIP1P30622 1438 aa11.94□□□□□ -0.5
CA1-220ENST00000523712 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
CA1-220ENST00000523712 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
CA1-220ENST00000523712 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
CA1-220ENST00000523712 CEP162Q5TB80 1403 aa11.93□□□□□ -0.5
CA1-220ENST00000523712 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
CA1-220ENST00000523712 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
CA1-220ENST00000523712 EFCAB5A4FU69 1503 aa11.92□□□□□ -0.5
CA1-220ENST00000523712 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
CA1-220ENST00000523712 PTPRGP23470 1445 aa11.91□□□□□ -0.5
CA1-220ENST00000523712 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
CA1-220ENST00000523712 KCNA4P22459 653 aa11.9□□□□□ -0.5
CA1-220ENST00000523712 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
CA1-220ENST00000523712 ATP1B4Q9UN42 357 aaPredicted RBP11.9□□□□□ -0.5
CA1-220ENST00000523712 SAMD9Q5K651 1589 aa11.88□□□□□ -0.51
CA1-220ENST00000523712 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
CA1-220ENST00000523712 ARHGAP35Q9NRY4 1499 aa11.87□□□□□ -0.51
CA1-220ENST00000523712 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
CA1-220ENST00000523712 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
CA1-220ENST00000523712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
CA1-220ENST00000523712 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
CA1-220ENST00000523712 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
CA1-220ENST00000523712 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
CA1-220ENST00000523712 UACAQ9BZF9 1416 aa11.82□□□□□ -0.52
CA1-220ENST00000523712 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
CA1-220ENST00000523712 APLP2Q06481 763 aa11.79□□□□□ -0.52
CA1-220ENST00000523712 RAPGEF6Q8TEU7 1601 aa11.78□□□□□ -0.52
CA1-220ENST00000523712 ABCC2Q92887 1545 aa11.77□□□□□ -0.52
CA1-220ENST00000523712 HECW1Q76N89 1606 aa11.76□□□□□ -0.53
CA1-220ENST00000523712 CNKSR2Q8WXI2 1034 aa11.76□□□□□ -0.53
CA1-220ENST00000523712 ABCA8O94911 1581 aa11.75□□□□□ -0.53
CA1-220ENST00000523712 DCAF8L1A6NGE4 600 aa11.75□□□□□ -0.53
CA1-220ENST00000523712 VPS8Q8N3P4 1428 aa11.75□□□□□ -0.53
CA1-220ENST00000523712 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
CA1-220ENST00000523712 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
CA1-220ENST00000523712 CASKIN1Q8WXD9 1431 aa11.74□□□□□ -0.53
CA1-220ENST00000523712 UHRF1BP1LA0JNW5 1464 aa11.74□□□□□ -0.53
CA1-220ENST00000523712 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
CA1-220ENST00000523712 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
CA1-220ENST00000523712 NUP153P49790 1475 aaKnown RBP11.71□□□□□ -0.53
CA1-220ENST00000523712 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
CA1-220ENST00000523712 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
CA1-220ENST00000523712 ZCCHC11Q5TAX3 1644 aaKnown RBP11.7□□□□□ -0.54
CA1-220ENST00000523712 PLEKHD1A6NEE1 506 aa11.69□□□□□ -0.54
CA1-220ENST00000523712 EPRSP07814 1512 aaKnown RBP11.69□□□□□ -0.54
CA1-220ENST00000523712 CDK13Q14004 1512 aaKnown RBP11.69□□□□□ -0.54
CA1-220ENST00000523712 KDM5BQ9UGL1 1544 aa11.69□□□□□ -0.54
CA1-220ENST00000523712 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
CA1-220ENST00000523712 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
CA1-220ENST00000523712 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
CA1-220ENST00000523712 ATP10BO94823 1461 aa11.68□□□□□ -0.54
CA1-220ENST00000523712 ASXL2Q76L83 1435 aa11.67□□□□□ -0.54
CA1-220ENST00000523712 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
CA1-220ENST00000523712 WDR7Q9Y4E6 1490 aa11.63□□□□□ -0.55
CA1-220ENST00000523712 MAPKBP1O60336 1514 aa11.63□□□□□ -0.55
CA1-220ENST00000523712 FAM69CQ0P6D2 419 aa11.62□□□□□ -0.55
CA1-220ENST00000523712 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
CA1-220ENST00000523712 TIAM1Q13009 1591 aa11.61□□□□□ -0.55
CA1-220ENST00000523712 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
CA1-220ENST00000523712 PPARGC1BQ86YN6 1023 aaKnown RBP11.6□□□□□ -0.55
CA1-220ENST00000523712 TROQ12816 1431 aaPredicted RBP11.6□□□□□ -0.55
CA1-220ENST00000523712 CFAP43Q8NDM7 1665 aa11.59□□□□□ -0.55
CA1-220ENST00000523712 KIF14Q15058 1648 aa11.58□□□□□ -0.56
CA1-220ENST00000523712 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
CA1-220ENST00000523712 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
CA1-220ENST00000523712 ABCC10Q5T3U5 1492 aa11.57□□□□□ -0.56
CA1-220ENST00000523712 MAP3K1Q13233 1512 aa11.56□□□□□ -0.56
CA1-220ENST00000523712 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
CA1-220ENST00000523712 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
CA1-220ENST00000523712 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms