RNA–Protein interactions for RNA: ENST00000523323.5

ITGB2-222, Transcript of integrin subunit beta 2, humanhuman

TSL 2

Gene ITGB2, Length 2,823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-222ENST00000523323 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
ITGB2-222ENST00000523323 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
ITGB2-222ENST00000523323 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
ITGB2-222ENST00000523323 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
ITGB2-222ENST00000523323 MRC2Q9UBG0 1479 aa23.08■■□□□ 1.28
ITGB2-222ENST00000523323 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
ITGB2-222ENST00000523323 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
ITGB2-222ENST00000523323 CUL7Q14999 1698 aa23.01■■□□□ 1.27
ITGB2-222ENST00000523323 PCF11O94913 1555 aaKnown RBP22.98■■□□□ 1.27
ITGB2-222ENST00000523323 CTTNBP2Q8WZ74 1663 aa22.94■■□□□ 1.26
ITGB2-222ENST00000523323 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
ITGB2-222ENST00000523323 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
ITGB2-222ENST00000523323 FBLN2P98095 1184 aa22.9■■□□□ 1.26
ITGB2-222ENST00000523323 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
ITGB2-222ENST00000523323 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
ITGB2-222ENST00000523323 WDR62O43379 1518 aa22.86■■□□□ 1.25
ITGB2-222ENST00000523323 FAM50AQ14320 339 aaKnown RBP22.86■■□□□ 1.25
ITGB2-222ENST00000523323 LRRC9Q6ZRR7 1453 aa22.84■■□□□ 1.25
ITGB2-222ENST00000523323 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.24
ITGB2-222ENST00000523323 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
ITGB2-222ENST00000523323 GRIN2BQ13224 1484 aa22.81■■□□□ 1.24
ITGB2-222ENST00000523323 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
ITGB2-222ENST00000523323 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
ITGB2-222ENST00000523323 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
ITGB2-222ENST00000523323 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
ITGB2-222ENST00000523323 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
ITGB2-222ENST00000523323 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
ITGB2-222ENST00000523323 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
ITGB2-222ENST00000523323 CASKIN1Q8WXD9 1431 aa22.75■■□□□ 1.23
ITGB2-222ENST00000523323 LRRIQ1Q96JM4 1722 aa22.73■■□□□ 1.23
ITGB2-222ENST00000523323 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
ITGB2-222ENST00000523323 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
ITGB2-222ENST00000523323 FMN1Q68DA7 1419 aa22.7■■□□□ 1.22
ITGB2-222ENST00000523323 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
ITGB2-222ENST00000523323 CFAP43Q8NDM7 1665 aa22.69■■□□□ 1.22
ITGB2-222ENST00000523323 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
ITGB2-222ENST00000523323 MTUS2Q5JR59 1369 aa22.67■■□□□ 1.22
ITGB2-222ENST00000523323 DHX57Q6P158 1386 aaKnown RBP22.65■■□□□ 1.22
ITGB2-222ENST00000523323 MAP3K1Q13233 1512 aa22.63■■□□□ 1.21
ITGB2-222ENST00000523323 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
ITGB2-222ENST00000523323 CDK13Q14004 1512 aaKnown RBP22.61■■□□□ 1.21
ITGB2-222ENST00000523323 MAGI3Q5TCQ9 1506 aa22.6■■□□□ 1.21
ITGB2-222ENST00000523323 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
ITGB2-222ENST00000523323 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
ITGB2-222ENST00000523323 DISP1Q96F81 1524 aa22.53■■□□□ 1.2
ITGB2-222ENST00000523323 NCOA2Q15596 1464 aa22.51■■□□□ 1.19
ITGB2-222ENST00000523323 KIAA0586Q9BVV6 1533 aa22.5■■□□□ 1.19
ITGB2-222ENST00000523323 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
ITGB2-222ENST00000523323 FGD6Q6ZV73 1430 aa22.49■■□□□ 1.19
ITGB2-222ENST00000523323 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
ITGB2-222ENST00000523323 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
ITGB2-222ENST00000523323 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
ITGB2-222ENST00000523323 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
ITGB2-222ENST00000523323 UGGT2Q9NYU1 1516 aa22.46■■□□□ 1.19
ITGB2-222ENST00000523323 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
ITGB2-222ENST00000523323 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
ITGB2-222ENST00000523323 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
ITGB2-222ENST00000523323 KIAA0556O60303 1618 aa22.45■■□□□ 1.18
ITGB2-222ENST00000523323 SETD5Q9C0A6 1442 aa22.44■■□□□ 1.18
ITGB2-222ENST00000523323 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
ITGB2-222ENST00000523323 PLB1Q6P1J6 1458 aa22.43■■□□□ 1.18
ITGB2-222ENST00000523323 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
ITGB2-222ENST00000523323 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
ITGB2-222ENST00000523323 HECW1Q76N89 1606 aa22.39■■□□□ 1.17
ITGB2-222ENST00000523323 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.17
ITGB2-222ENST00000523323 MYOM3Q5VTT5 1437 aa22.39■■□□□ 1.17
ITGB2-222ENST00000523323 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
ITGB2-222ENST00000523323 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
ITGB2-222ENST00000523323 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
ITGB2-222ENST00000523323 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
ITGB2-222ENST00000523323 PRG4Q92954 1404 aaPredicted RBP22.33■■□□□ 1.16
ITGB2-222ENST00000523323 CCDC18Q5T9S5 1454 aa22.32■■□□□ 1.16
ITGB2-222ENST00000523323 NUP160Q12769 1436 aa22.32■■□□□ 1.16
ITGB2-222ENST00000523323 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
ITGB2-222ENST00000523323 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
ITGB2-222ENST00000523323 ZNF777Q9ULD5 760 aaPredicted RBP22.28■■□□□ 1.16
ITGB2-222ENST00000523323 ARHGEF11O15085 1522 aa22.25■■□□□ 1.15
ITGB2-222ENST00000523323 CHD1O14646 1710 aa22.23■■□□□ 1.15
ITGB2-222ENST00000523323 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
ITGB2-222ENST00000523323 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
ITGB2-222ENST00000523323 HIRIP3Q9BW71 556 aaPredicted RBP22.21■■□□□ 1.15
ITGB2-222ENST00000523323 NAIPQ13075 1403 aa22.2■■□□□ 1.14
ITGB2-222ENST00000523323 FOXD1Q16676 465 aa22.19■■□□□ 1.14
ITGB2-222ENST00000523323 MIER1Q8N108 512 aa22.19■■□□□ 1.14
ITGB2-222ENST00000523323 KDM6BO15054 1643 aa22.18■■□□□ 1.14
ITGB2-222ENST00000523323 ERCC6L2Q5T890 1561 aa22.18■■□□□ 1.14
ITGB2-222ENST00000523323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.18■■□□□ 1.147e-9■■■■■ 63.8
ITGB2-222ENST00000523323 KIF14Q15058 1648 aa22.17■■□□□ 1.14
ITGB2-222ENST00000523323 TRIM52Q96A61 297 aa22.17■■□□□ 1.14
ITGB2-222ENST00000523323 HFM1A2PYH4 1435 aa22.16■■□□□ 1.14
ITGB2-222ENST00000523323 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
ITGB2-222ENST00000523323 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
ITGB2-222ENST00000523323 CFDP1Q9UEE9 299 aaPredicted RBP22.12■■□□□ 1.13
ITGB2-222ENST00000523323 PTPRGP23470 1445 aa22.11■■□□□ 1.13
ITGB2-222ENST00000523323 ATP10BO94823 1461 aa22.09■■□□□ 1.13
ITGB2-222ENST00000523323 TROQ12816 1431 aaPredicted RBP22.09■■□□□ 1.13
ITGB2-222ENST00000523323 TCOF1Q13428 1488 aaKnown RBP22.09■■□□□ 1.13
ITGB2-222ENST00000523323 PLEKHD1A6NEE1 506 aa22.07■■□□□ 1.12
ITGB2-222ENST00000523323 ABCC5O15440 1437 aa22.05■■□□□ 1.12
ITGB2-222ENST00000523323 BCL11AQ9H165 835 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms