RNA–Protein interactions for RNA: ENST00000522880.1

SFTPC-208, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-208ENST00000522880 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
SFTPC-208ENST00000522880 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
SFTPC-208ENST00000522880 FAM9AQ8IZU1 332 aaPredicted RBP24.53■■□□□ 1.52
SFTPC-208ENST00000522880 TRHP20396 242 aaPredicted RBP24.49■■□□□ 1.51
SFTPC-208ENST00000522880 ARAP1Q96P48 1450 aa24.46■■□□□ 1.51
SFTPC-208ENST00000522880 KIAA0586Q9BVV6 1533 aa24.44■■□□□ 1.5
SFTPC-208ENST00000522880 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
SFTPC-208ENST00000522880 KIF21BO75037 1637 aa24.35■■□□□ 1.49
SFTPC-208ENST00000522880 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
SFTPC-208ENST00000522880 IQGAP2Q13576 1575 aa24.31■■□□□ 1.48
SFTPC-208ENST00000522880 PRG4Q92954 1404 aaPredicted RBP24.28■■□□□ 1.48
SFTPC-208ENST00000522880 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
SFTPC-208ENST00000522880 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
SFTPC-208ENST00000522880 UGGT2Q9NYU1 1516 aa24.2■■□□□ 1.47
SFTPC-208ENST00000522880 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.46
SFTPC-208ENST00000522880 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
SFTPC-208ENST00000522880 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
SFTPC-208ENST00000522880 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
SFTPC-208ENST00000522880 EHMT2Q96KQ7 1210 aa24.16■■□□□ 1.46
SFTPC-208ENST00000522880 DISP1Q96F81 1524 aa24.12■■□□□ 1.45
SFTPC-208ENST00000522880 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
SFTPC-208ENST00000522880 KIAA0556O60303 1618 aa24.06■■□□□ 1.44
SFTPC-208ENST00000522880 PTPRGP23470 1445 aa24.05■■□□□ 1.44
SFTPC-208ENST00000522880 RANGAP1P46060 587 aaPredicted RBP24■■□□□ 1.43
SFTPC-208ENST00000522880 EFCAB5A4FU69 1503 aa23.99■■□□□ 1.43
SFTPC-208ENST00000522880 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
SFTPC-208ENST00000522880 TTBK1Q5TCY1 1321 aaPredicted RBP23.95■■□□□ 1.42
SFTPC-208ENST00000522880 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
SFTPC-208ENST00000522880 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
SFTPC-208ENST00000522880 UACAQ9BZF9 1416 aa23.89■■□□□ 1.41
SFTPC-208ENST00000522880 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
SFTPC-208ENST00000522880 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
SFTPC-208ENST00000522880 UHRF1BP1LA0JNW5 1464 aa23.86■■□□□ 1.41
SFTPC-208ENST00000522880 CLIP1P30622 1438 aa23.84■■□□□ 1.41
SFTPC-208ENST00000522880 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
SFTPC-208ENST00000522880 ADCY10Q96PN6 1610 aa23.83■■□□□ 1.41
SFTPC-208ENST00000522880 ABCC2Q92887 1545 aa23.82■■□□□ 1.4
SFTPC-208ENST00000522880 PLB1Q6P1J6 1458 aa23.81■■□□□ 1.4
SFTPC-208ENST00000522880 ABCA8O94911 1581 aa23.79■■□□□ 1.4
SFTPC-208ENST00000522880 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
SFTPC-208ENST00000522880 FMN1Q68DA7 1419 aa23.78■■□□□ 1.4
SFTPC-208ENST00000522880 KDM5BQ9UGL1 1544 aa23.72■■□□□ 1.39
SFTPC-208ENST00000522880 RAPGEF6Q8TEU7 1601 aa23.7■■□□□ 1.39
SFTPC-208ENST00000522880 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
SFTPC-208ENST00000522880 NUP153P49790 1475 aaKnown RBP23.64■■□□□ 1.38
SFTPC-208ENST00000522880 KIF13AQ9H1H9 1805 aa23.63■■□□□ 1.37
SFTPC-208ENST00000522880 ZCCHC11Q5TAX3 1644 aaKnown RBP23.62■■□□□ 1.37
SFTPC-208ENST00000522880 ATP10BO94823 1461 aa23.61■■□□□ 1.37
SFTPC-208ENST00000522880 ASXL2Q76L83 1435 aa23.6■■□□□ 1.37
SFTPC-208ENST00000522880 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
SFTPC-208ENST00000522880 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
SFTPC-208ENST00000522880 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
SFTPC-208ENST00000522880 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
SFTPC-208ENST00000522880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.57■■□□□ 1.36
SFTPC-208ENST00000522880 HNRNPUL2Q1KMD3 747 aaKnown RBP23.57■■□□□ 1.36
SFTPC-208ENST00000522880 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
SFTPC-208ENST00000522880 ABCC10Q5T3U5 1492 aa23.55■■□□□ 1.36
SFTPC-208ENST00000522880 WDR7Q9Y4E6 1490 aa23.54■■□□□ 1.36
SFTPC-208ENST00000522880 PCF11O94913 1555 aaKnown RBP23.53■■□□□ 1.36
SFTPC-208ENST00000522880 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
SFTPC-208ENST00000522880 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
SFTPC-208ENST00000522880 CCDC18Q5T9S5 1454 aa23.49■■□□□ 1.35
SFTPC-208ENST00000522880 FAM69CQ0P6D2 419 aa23.49■■□□□ 1.35
SFTPC-208ENST00000522880 PLEKHD1A6NEE1 506 aa23.48■■□□□ 1.35
SFTPC-208ENST00000522880 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
SFTPC-208ENST00000522880 CDK13Q14004 1512 aaKnown RBP23.48■■□□□ 1.35
SFTPC-208ENST00000522880 DIP2BQ9P265 1576 aa23.47■■□□□ 1.35
SFTPC-208ENST00000522880 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
SFTPC-208ENST00000522880 GLI2P10070 1586 aa23.42■■□□□ 1.34
SFTPC-208ENST00000522880 TROQ12816 1431 aaPredicted RBP23.35■■□□□ 1.33
SFTPC-208ENST00000522880 LRRIQ1Q96JM4 1722 aa23.35■■□□□ 1.33
SFTPC-208ENST00000522880 CD109Q6YHK3 1445 aa23.29■■□□□ 1.32
SFTPC-208ENST00000522880 KDM6BO15054 1643 aa23.29■■□□□ 1.32
SFTPC-208ENST00000522880 MAP3K4Q9Y6R4 1608 aa23.29■■□□□ 1.32
SFTPC-208ENST00000522880 MTUS2Q5JR59 1369 aa23.28■■□□□ 1.32
SFTPC-208ENST00000522880 TSPOAP1O95153 1857 aa23.28■■□□□ 1.32
SFTPC-208ENST00000522880 ABCA9Q8IUA7 1624 aa23.28■■□□□ 1.32
SFTPC-208ENST00000522880 APLP2Q06481 763 aa23.27■■□□□ 1.32
SFTPC-208ENST00000522880 CFAP43Q8NDM7 1665 aa23.27■■□□□ 1.32
SFTPC-208ENST00000522880 MAP3K1Q13233 1512 aa23.27■■□□□ 1.32
SFTPC-208ENST00000522880 KDM4FA0A1W2PPD8 638 aa23.26■■□□□ 1.31
SFTPC-208ENST00000522880 KIF14Q15058 1648 aa23.26■■□□□ 1.31
SFTPC-208ENST00000522880 MAGI3Q5TCQ9 1506 aa23.25■■□□□ 1.31
SFTPC-208ENST00000522880 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
SFTPC-208ENST00000522880 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
SFTPC-208ENST00000522880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.23■■□□□ 1.31
SFTPC-208ENST00000522880 EHBP1L1Q8N3D4 1523 aa23.22■■□□□ 1.31
SFTPC-208ENST00000522880 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
SFTPC-208ENST00000522880 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
SFTPC-208ENST00000522880 LRRC9Q6ZRR7 1453 aa23.17■■□□□ 1.3
SFTPC-208ENST00000522880 PPRC1Q5VV67 1664 aaKnown RBP23.16■■□□□ 1.3
SFTPC-208ENST00000522880 PLCH2O75038 1416 aa23.15■■□□□ 1.3
SFTPC-208ENST00000522880 PHLDB1Q86UU1 1377 aa23.14■■□□□ 1.29
SFTPC-208ENST00000522880 ARAP3Q8WWN8 1544 aa23.12■■□□□ 1.29
SFTPC-208ENST00000522880 NEO1Q92859 1461 aa23.11■■□□□ 1.29
SFTPC-208ENST00000522880 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
SFTPC-208ENST00000522880 FANCAO15360 1455 aa23.1■■□□□ 1.29
SFTPC-208ENST00000522880 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
SFTPC-208ENST00000522880 EFCAB2Q5VUJ9 269 aa23.08■■□□□ 1.29
SFTPC-208ENST00000522880 MYO5CQ9NQX4 1742 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms