RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 UBTFP17480 764 aaKnown RBP41.74■■■■■ 4.27
NKX2-1-204ENST00000522719 LOC105371045A0A1W2PR82 267 aa41.71■■■■■ 4.27
NKX2-1-204ENST00000522719 KIAA0586Q9BVV6 1533 aa41.66■■■■■ 4.26
NKX2-1-204ENST00000522719 OSCARQ8IYS5 282 aa41.66■■■■■ 4.26
NKX2-1-204ENST00000522719 TNIKQ9UKE5 1360 aa41.62■■■■■ 4.25
NKX2-1-204ENST00000522719 IQGAP2Q13576 1575 aa41.58■■■■■ 4.25
NKX2-1-204ENST00000522719 CLASP1Q7Z460 1538 aa41.56■■■■■ 4.24
NKX2-1-204ENST00000522719 SHROOM2Q13796 1616 aa41.4■■■■■ 4.22
NKX2-1-204ENST00000522719 UGGT2Q9NYU1 1516 aa41.38■■■■■ 4.21
NKX2-1-204ENST00000522719 JPH4Q96JJ6 628 aa41.37■■■■■ 4.21
NKX2-1-204ENST00000522719 CEP162Q5TB80 1403 aa41.26■■■■■ 4.2
NKX2-1-204ENST00000522719 EFCAB5A4FU69 1503 aa41.24■■■■■ 4.19
NKX2-1-204ENST00000522719 RANGAP1P46060 587 aaPredicted RBP41.23■■■■■ 4.19
NKX2-1-204ENST00000522719 SAMD9Q5K651 1589 aa41.23■■■■■ 4.19
NKX2-1-204ENST00000522719 CLIP1P30622 1438 aa41.22■■■■■ 4.19
NKX2-1-204ENST00000522719 PRG4Q92954 1404 aaPredicted RBP41.2■■■■■ 4.19
NKX2-1-204ENST00000522719 DISP1Q96F81 1524 aa41.18■■■■■ 4.18
NKX2-1-204ENST00000522719 CARMIL2Q6F5E8 1435 aa41.18■■■■■ 4.18
NKX2-1-204ENST00000522719 KIAA0556O60303 1618 aa41.16■■■■■ 4.18
NKX2-1-204ENST00000522719 ARHGAP35Q9NRY4 1499 aa41.14■■■■■ 4.18
NKX2-1-204ENST00000522719 ERCC6L2Q5T890 1561 aa41.04■■■■■ 4.16
NKX2-1-204ENST00000522719 P3H3Q8IVL6 736 aa41■■■■■ 4.15
NKX2-1-204ENST00000522719 FHOD3Q2V2M9 1422 aa40.96■■■■■ 4.15
NKX2-1-204ENST00000522719 ARHGEF11O15085 1522 aa40.96■■■■■ 4.15
NKX2-1-204ENST00000522719 ARAP1Q96P48 1450 aa40.94■■■■■ 4.15
NKX2-1-204ENST00000522719 RIMBP3CA6NJZ7 1639 aa40.87■■■■■ 4.13
NKX2-1-204ENST00000522719 RIMBP3BA6NNM3 1639 aa40.87■■■■■ 4.13
NKX2-1-204ENST00000522719 RIMBP3Q9UFD9 1639 aa40.87■■■■■ 4.13
NKX2-1-204ENST00000522719 PTPRGP23470 1445 aa40.84■■■■■ 4.13
NKX2-1-204ENST00000522719 FMN1Q68DA7 1419 aa40.84■■■■■ 4.13
NKX2-1-204ENST00000522719 VPS8Q8N3P4 1428 aa40.72■■■■■ 4.11
NKX2-1-204ENST00000522719 TTBK1Q5TCY1 1321 aaPredicted RBP40.72■■■■■ 4.11
NKX2-1-204ENST00000522719 ABCA8O94911 1581 aa40.64■■■■■ 4.1
NKX2-1-204ENST00000522719 RAPGEF6Q8TEU7 1601 aa40.63■■■■■ 4.1
NKX2-1-204ENST00000522719 PLB1Q6P1J6 1458 aa40.61■■■■■ 4.09
NKX2-1-204ENST00000522719 CASKIN1Q8WXD9 1431 aa40.61■■■■■ 4.09
NKX2-1-204ENST00000522719 UACAQ9BZF9 1416 aa40.6■■■■■ 4.09
NKX2-1-204ENST00000522719 PCF11O94913 1555 aaKnown RBP40.59■■■■■ 4.09
NKX2-1-204ENST00000522719 FYCO1Q9BQS8 1478 aa40.57■■■■■ 4.09
NKX2-1-204ENST00000522719 UHRF1BP1LA0JNW5 1464 aa40.55■■■■■ 4.08
NKX2-1-204ENST00000522719 HECW1Q76N89 1606 aa40.54■■■■■ 4.08
NKX2-1-204ENST00000522719 ABCC2Q92887 1545 aa40.54■■■■■ 4.08
NKX2-1-204ENST00000522719 CYB5RLQ6IPT4 315 aa40.5■■■■■ 4.07
NKX2-1-204ENST00000522719 ADCY10Q96PN6 1610 aa40.46■■■■■ 4.07
NKX2-1-204ENST00000522719 NUP153P49790 1475 aaKnown RBP40.46■■■■■ 4.07
NKX2-1-204ENST00000522719 ATP1B4Q9UN42 357 aaPredicted RBP40.43■■■■■ 4.06
NKX2-1-204ENST00000522719 LRRIQ1Q96JM4 1722 aa40.39■■■■■ 4.06
NKX2-1-204ENST00000522719 CCDC18Q5T9S5 1454 aa40.37■■■■■ 4.05
NKX2-1-204ENST00000522719 EPRSP07814 1512 aaKnown RBP40.37■■■■■ 4.05
NKX2-1-204ENST00000522719 KDM5BQ9UGL1 1544 aa40.34■■■■■ 4.05
NKX2-1-204ENST00000522719 ATP10BO94823 1461 aa40.3■■■■■ 4.04
NKX2-1-204ENST00000522719 MAP3K1Q13233 1512 aa40.29■■■■■ 4.04
NKX2-1-204ENST00000522719 APLP2Q06481 763 aa40.27■■■■■ 4.04
NKX2-1-204ENST00000522719 ZCCHC11Q5TAX3 1644 aaKnown RBP40.27■■■■■ 4.04
NKX2-1-204ENST00000522719 CFAP43Q8NDM7 1665 aa40.26■■■■■ 4.04
NKX2-1-204ENST00000522719 CDK13Q14004 1512 aaKnown RBP40.25■■■■■ 4.03
NKX2-1-204ENST00000522719 TIAM1Q13009 1591 aa40.24■■■■■ 4.03
NKX2-1-204ENST00000522719 ARID3CA6NKF2 412 aa40.23■■■■■ 4.03
NKX2-1-204ENST00000522719 NPM1P06748 294 aaKnown RBP eCLIP40.23■■■■■ 4.03
NKX2-1-204ENST00000522719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.18■■■■■ 4.02
NKX2-1-204ENST00000522719 HNRNPUL2Q1KMD3 747 aaKnown RBP40.18■■■■■ 4.02
NKX2-1-204ENST00000522719 CDK11AQ9UQ88 783 aaPredicted RBP40.15■■■■■ 4.02
NKX2-1-204ENST00000522719 PLEKHD1A6NEE1 506 aa40.06■■■■■ 4
NKX2-1-204ENST00000522719 MAPKBP1O60336 1514 aa40.04■■■■■ 4
NKX2-1-204ENST00000522719 LRRC9Q6ZRR7 1453 aa40.03■■■■■ 4
NKX2-1-204ENST00000522719 MAGI3Q5TCQ9 1506 aa40.01■■■■■ 4
NKX2-1-204ENST00000522719 MTUS2Q5JR59 1369 aa40.01■■■■□ 3.99
NKX2-1-204ENST00000522719 EHBP1L1Q8N3D4 1523 aa40■■■■□ 3.99
NKX2-1-204ENST00000522719 ASXL2Q76L83 1435 aa40■■■■□ 3.99
NKX2-1-204ENST00000522719 TROQ12816 1431 aaPredicted RBP39.99■■■■□ 3.99
NKX2-1-204ENST00000522719 KANK4Q5T7N3 995 aaPredicted RBP39.98■■■■□ 3.99
NKX2-1-204ENST00000522719 WDR7Q9Y4E6 1490 aa39.96■■■■□ 3.99
NKX2-1-204ENST00000522719 SUPT6HQ7KZ85 1726 aaKnown RBP39.86■■■■□ 3.97
NKX2-1-204ENST00000522719 KIF14Q15058 1648 aa39.85■■■■□ 3.97
NKX2-1-204ENST00000522719 PPARGC1BQ86YN6 1023 aaKnown RBP39.78■■■■□ 3.96
NKX2-1-204ENST00000522719 KCNH8Q96L42 1107 aa39.78■■■■□ 3.96
NKX2-1-204ENST00000522719 NCOA2Q15596 1464 aa39.74■■■■□ 3.95
NKX2-1-204ENST00000522719 ABCC10Q5T3U5 1492 aa39.7■■■■□ 3.95
NKX2-1-204ENST00000522719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.7■■■■□ 3.95
NKX2-1-204ENST00000522719 ABCA9Q8IUA7 1624 aa39.69■■■■□ 3.94
NKX2-1-204ENST00000522719 GLI2P10070 1586 aa39.68■■■■□ 3.94
NKX2-1-204ENST00000522719 DIP2BQ9P265 1576 aa39.67■■■■□ 3.94
NKX2-1-204ENST00000522719 TTC37Q6PGP7 1564 aa39.65■■■■□ 3.94
NKX2-1-204ENST00000522719 CCNB3Q8WWL7 1395 aa39.6■■■■□ 3.93
NKX2-1-204ENST00000522719 KIF13AQ9H1H9 1805 aa39.6■■■■□ 3.93
NKX2-1-204ENST00000522719 MYO5CQ9NQX4 1742 aa39.59■■■■□ 3.93
NKX2-1-204ENST00000522719 CDC42BPAQ5VT25 1732 aa39.58■■■■□ 3.93
NKX2-1-204ENST00000522719 ITSN2Q9NZM3 1697 aa39.58■■■■□ 3.93
NKX2-1-204ENST00000522719 PHLDB1Q86UU1 1377 aa39.55■■■■□ 3.92
NKX2-1-204ENST00000522719 FAM69CQ0P6D2 419 aa39.55■■■■□ 3.92
NKX2-1-204ENST00000522719 MAP3K4Q9Y6R4 1608 aa39.54■■■■□ 3.92
NKX2-1-204ENST00000522719 GPATCH8Q9UKJ3 1502 aaKnown RBP39.53■■■■□ 3.92
NKX2-1-204ENST00000522719 MYOM3Q5VTT5 1437 aa39.53■■■■□ 3.92
NKX2-1-204ENST00000522719 PREX2Q70Z35 1606 aa39.52■■■■□ 3.92
NKX2-1-204ENST00000522719 CDC42BPBQ9Y5S2 1711 aa39.49■■■■□ 3.91
NKX2-1-204ENST00000522719 PLCH2O75038 1416 aa39.48■■■■□ 3.91
NKX2-1-204ENST00000522719 CD109Q6YHK3 1445 aa39.48■■■■□ 3.91
NKX2-1-204ENST00000522719 ARAP3Q8WWN8 1544 aa39.48■■■■□ 3.91
NKX2-1-204ENST00000522719 MIA2Q96PC5 1412 aa39.44■■■■□ 3.9
NKX2-1-204ENST00000522719 CFDP1Q9UEE9 299 aaPredicted RBP39.4■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms