RNA–Protein interactions for RNA: ENST00000522605.1

PCDHGB2-201, Transcript of protocadherin gamma subfamily B, 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB2, Length 4,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB2-201ENST00000522605 RAB3GAP2Q9H2M9 1393 aa17.05■□□□□ 0.32
PCDHGB2-201ENST00000522605 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
PCDHGB2-201ENST00000522605 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.32
PCDHGB2-201ENST00000522605 CUX2O14529 1486 aa17.02■□□□□ 0.31
PCDHGB2-201ENST00000522605 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
PCDHGB2-201ENST00000522605 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
PCDHGB2-201ENST00000522605 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
PCDHGB2-201ENST00000522605 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
PCDHGB2-201ENST00000522605 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
PCDHGB2-201ENST00000522605 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
PCDHGB2-201ENST00000522605 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.31
PCDHGB2-201ENST00000522605 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
PCDHGB2-201ENST00000522605 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
PCDHGB2-201ENST00000522605 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
PCDHGB2-201ENST00000522605 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
PCDHGB2-201ENST00000522605 RRBP1Q9P2E9 1410 aaKnown RBP16.9■□□□□ 0.3
PCDHGB2-201ENST00000522605 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
PCDHGB2-201ENST00000522605 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
PCDHGB2-201ENST00000522605 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
PCDHGB2-201ENST00000522605 NEFMP07197 916 aa16.89■□□□□ 0.29
PCDHGB2-201ENST00000522605 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
PCDHGB2-201ENST00000522605 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
PCDHGB2-201ENST00000522605 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
PCDHGB2-201ENST00000522605 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
PCDHGB2-201ENST00000522605 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
PCDHGB2-201ENST00000522605 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
PCDHGB2-201ENST00000522605 FAM9BQ8IZU0 186 aa16.83■□□□□ 0.28
PCDHGB2-201ENST00000522605 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
PCDHGB2-201ENST00000522605 EIF4G2P78344 907 aaKnown RBP eCLIP16.82■□□□□ 0.28
PCDHGB2-201ENST00000522605 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
PCDHGB2-201ENST00000522605 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
PCDHGB2-201ENST00000522605 CHGAP10645 457 aaKnown RBP16.82■□□□□ 0.28
PCDHGB2-201ENST00000522605 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
PCDHGB2-201ENST00000522605 ESF1Q9H501 851 aaKnown RBP16.79■□□□□ 0.28
PCDHGB2-201ENST00000522605 IGF1RP08069 1367 aa16.78■□□□□ 0.28
PCDHGB2-201ENST00000522605 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
PCDHGB2-201ENST00000522605 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
PCDHGB2-201ENST00000522605 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
PCDHGB2-201ENST00000522605 RBM19Q9Y4C8 960 aaKnown RBP16.75■□□□□ 0.27
PCDHGB2-201ENST00000522605 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
PCDHGB2-201ENST00000522605 CUX1P39880 1505 aa16.74■□□□□ 0.27
PCDHGB2-201ENST00000522605 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
PCDHGB2-201ENST00000522605 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
PCDHGB2-201ENST00000522605 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
PCDHGB2-201ENST00000522605 FMN1Q68DA7 1419 aa16.71■□□□□ 0.27
PCDHGB2-201ENST00000522605 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
PCDHGB2-201ENST00000522605 CFTRP13569 1480 aa16.69■□□□□ 0.26
PCDHGB2-201ENST00000522605 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDHGB2-201ENST00000522605 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
PCDHGB2-201ENST00000522605 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
PCDHGB2-201ENST00000522605 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
PCDHGB2-201ENST00000522605 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
PCDHGB2-201ENST00000522605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCDHGB2-201ENST00000522605 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
PCDHGB2-201ENST00000522605 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
PCDHGB2-201ENST00000522605 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
PCDHGB2-201ENST00000522605 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
PCDHGB2-201ENST00000522605 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
PCDHGB2-201ENST00000522605 CCDC136Q96JN2 1154 aa16.6■□□□□ 0.25
PCDHGB2-201ENST00000522605 TMC1Q8TDI8 760 aa16.58■□□□□ 0.25
PCDHGB2-201ENST00000522605 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
PCDHGB2-201ENST00000522605 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
PCDHGB2-201ENST00000522605 ERICH6BQ5W0A0 696 aa16.57■□□□□ 0.24
PCDHGB2-201ENST00000522605 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
PCDHGB2-201ENST00000522605 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
PCDHGB2-201ENST00000522605 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
PCDHGB2-201ENST00000522605 TSPY4P0CV99 314 aa16.55■□□□□ 0.24
PCDHGB2-201ENST00000522605 TSPY10P0CW01 314 aa16.55■□□□□ 0.24
PCDHGB2-201ENST00000522605 CASKIN1Q8WXD9 1431 aa16.55■□□□□ 0.24
PCDHGB2-201ENST00000522605 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
PCDHGB2-201ENST00000522605 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
PCDHGB2-201ENST00000522605 UACAQ9BZF9 1416 aa16.53■□□□□ 0.24
PCDHGB2-201ENST00000522605 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
PCDHGB2-201ENST00000522605 FYCO1Q9BQS8 1478 aa16.53■□□□□ 0.24
PCDHGB2-201ENST00000522605 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
PCDHGB2-201ENST00000522605 FOXD1Q16676 465 aa16.51■□□□□ 0.23
PCDHGB2-201ENST00000522605 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
PCDHGB2-201ENST00000522605 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
PCDHGB2-201ENST00000522605 L3MBTL2Q969R5 705 aa16.5■□□□□ 0.23
PCDHGB2-201ENST00000522605 MAPKBP1O60336 1514 aa16.49■□□□□ 0.23
PCDHGB2-201ENST00000522605 NBR1Q14596 966 aa16.48■□□□□ 0.23
PCDHGB2-201ENST00000522605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHGB2-201ENST00000522605 MYOM3Q5VTT5 1437 aa16.47■□□□□ 0.23
PCDHGB2-201ENST00000522605 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
PCDHGB2-201ENST00000522605 CFDP1Q9UEE9 299 aaPredicted RBP16.46■□□□□ 0.23
PCDHGB2-201ENST00000522605 EFCAB5A4FU69 1503 aa16.46■□□□□ 0.22
PCDHGB2-201ENST00000522605 PCF11O94913 1555 aaKnown RBP16.44■□□□□ 0.22
PCDHGB2-201ENST00000522605 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
PCDHGB2-201ENST00000522605 PLEKHG5O94827 1062 aa16.42■□□□□ 0.22
PCDHGB2-201ENST00000522605 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
PCDHGB2-201ENST00000522605 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
PCDHGB2-201ENST00000522605 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
PCDHGB2-201ENST00000522605 UPF2Q9HAU5 1272 aaKnown RBP16.42■□□□□ 0.22
PCDHGB2-201ENST00000522605 CARD11Q9BXL7 1154 aa16.4■□□□□ 0.22
PCDHGB2-201ENST00000522605 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
PCDHGB2-201ENST00000522605 NOP58Q9Y2X3 529 aaKnown RBP16.39■□□□□ 0.21
PCDHGB2-201ENST00000522605 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
PCDHGB2-201ENST00000522605 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
PCDHGB2-201ENST00000522605 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
PCDHGB2-201ENST00000522605 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms