RNA–Protein interactions for RNA: ENST00000522480.5

SMG1P3-205, Transcript of SMG1 pseudogene 3, humanhuman

BASIC

Gene SMG1P3, Length 4,262 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-205ENST00000522480 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
SMG1P3-205ENST00000522480 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
SMG1P3-205ENST00000522480 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
SMG1P3-205ENST00000522480 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
SMG1P3-205ENST00000522480 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
SMG1P3-205ENST00000522480 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
SMG1P3-205ENST00000522480 CLIP1P30622 1438 aa17.33■□□□□ 0.37
SMG1P3-205ENST00000522480 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.36
SMG1P3-205ENST00000522480 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
SMG1P3-205ENST00000522480 ARHGAP35Q9NRY4 1499 aa17.32■□□□□ 0.36
SMG1P3-205ENST00000522480 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
SMG1P3-205ENST00000522480 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
SMG1P3-205ENST00000522480 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
SMG1P3-205ENST00000522480 DISP1Q96F81 1524 aa17.24■□□□□ 0.35
SMG1P3-205ENST00000522480 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
SMG1P3-205ENST00000522480 FBLN2P98095 1184 aa17.17■□□□□ 0.34
SMG1P3-205ENST00000522480 PCF11O94913 1555 aaKnown RBP17.13■□□□□ 0.33
SMG1P3-205ENST00000522480 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
SMG1P3-205ENST00000522480 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
SMG1P3-205ENST00000522480 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
SMG1P3-205ENST00000522480 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
SMG1P3-205ENST00000522480 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
SMG1P3-205ENST00000522480 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
SMG1P3-205ENST00000522480 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
SMG1P3-205ENST00000522480 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
SMG1P3-205ENST00000522480 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.32
SMG1P3-205ENST00000522480 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
SMG1P3-205ENST00000522480 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
SMG1P3-205ENST00000522480 RAPGEF6Q8TEU7 1601 aa17.06■□□□□ 0.32
SMG1P3-205ENST00000522480 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
SMG1P3-205ENST00000522480 ABCA8O94911 1581 aa17.04■□□□□ 0.32
SMG1P3-205ENST00000522480 RANGAP1P46060 587 aaPredicted RBP17.03■□□□□ 0.32
SMG1P3-205ENST00000522480 TIAM1Q13009 1591 aa17.02■□□□□ 0.32
SMG1P3-205ENST00000522480 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
SMG1P3-205ENST00000522480 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
SMG1P3-205ENST00000522480 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
SMG1P3-205ENST00000522480 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
SMG1P3-205ENST00000522480 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
SMG1P3-205ENST00000522480 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
SMG1P3-205ENST00000522480 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
SMG1P3-205ENST00000522480 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
SMG1P3-205ENST00000522480 PTPRGP23470 1445 aa16.91■□□□□ 0.3
SMG1P3-205ENST00000522480 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
SMG1P3-205ENST00000522480 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
SMG1P3-205ENST00000522480 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
SMG1P3-205ENST00000522480 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
SMG1P3-205ENST00000522480 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
SMG1P3-205ENST00000522480 UACAQ9BZF9 1416 aa16.87■□□□□ 0.29
SMG1P3-205ENST00000522480 ADCY10Q96PN6 1610 aa16.87■□□□□ 0.29
SMG1P3-205ENST00000522480 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
SMG1P3-205ENST00000522480 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
SMG1P3-205ENST00000522480 CDK13Q14004 1512 aaKnown RBP16.85■□□□□ 0.29
SMG1P3-205ENST00000522480 ZCCHC11Q5TAX3 1644 aaKnown RBP16.84■□□□□ 0.29
SMG1P3-205ENST00000522480 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
SMG1P3-205ENST00000522480 KDM5BQ9UGL1 1544 aa16.82■□□□□ 0.28
SMG1P3-205ENST00000522480 ATP10BO94823 1461 aa16.81■□□□□ 0.28
SMG1P3-205ENST00000522480 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
SMG1P3-205ENST00000522480 APLP2Q06481 763 aa16.78■□□□□ 0.28
SMG1P3-205ENST00000522480 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
SMG1P3-205ENST00000522480 KIF14Q15058 1648 aa16.71■□□□□ 0.27
SMG1P3-205ENST00000522480 NCOA2Q15596 1464 aa16.7■□□□□ 0.26
SMG1P3-205ENST00000522480 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
SMG1P3-205ENST00000522480 RRBP1Q9P2E9 1410 aaKnown RBP16.69■□□□□ 0.26
SMG1P3-205ENST00000522480 MTUS2Q5JR59 1369 aa16.69■□□□□ 0.26
SMG1P3-205ENST00000522480 TTBK1Q5TCY1 1321 aaPredicted RBP16.68■□□□□ 0.26
SMG1P3-205ENST00000522480 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
SMG1P3-205ENST00000522480 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
SMG1P3-205ENST00000522480 ABCC10Q5T3U5 1492 aa16.67■□□□□ 0.26
SMG1P3-205ENST00000522480 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
SMG1P3-205ENST00000522480 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
SMG1P3-205ENST00000522480 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
SMG1P3-205ENST00000522480 TRIM26Q12899 539 aaPredicted RBP16.64■□□□□ 0.25
SMG1P3-205ENST00000522480 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
SMG1P3-205ENST00000522480 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
SMG1P3-205ENST00000522480 MYOM3Q5VTT5 1437 aa16.62■□□□□ 0.25
SMG1P3-205ENST00000522480 MYO5CQ9NQX4 1742 aa16.61■□□□□ 0.25
SMG1P3-205ENST00000522480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.61■□□□□ 0.254e-15■□□□□ 9.4
SMG1P3-205ENST00000522480 TTC37Q6PGP7 1564 aa16.61■□□□□ 0.25
SMG1P3-205ENST00000522480 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
SMG1P3-205ENST00000522480 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
SMG1P3-205ENST00000522480 CDC42BPBQ9Y5S2 1711 aa16.61■□□□□ 0.25
SMG1P3-205ENST00000522480 ABCA9Q8IUA7 1624 aa16.61■□□□□ 0.25
SMG1P3-205ENST00000522480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.256e-8■□□□□ 10.1
SMG1P3-205ENST00000522480 PTPN23Q9H3S7 1636 aa16.6■□□□□ 0.25
SMG1P3-205ENST00000522480 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
SMG1P3-205ENST00000522480 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.25
SMG1P3-205ENST00000522480 PLEKHD1A6NEE1 506 aa16.57■□□□□ 0.24
SMG1P3-205ENST00000522480 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
SMG1P3-205ENST00000522480 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
SMG1P3-205ENST00000522480 GPATCH8Q9UKJ3 1502 aaKnown RBP16.56■□□□□ 0.24
SMG1P3-205ENST00000522480 ASXL2Q76L83 1435 aa16.56■□□□□ 0.24
SMG1P3-205ENST00000522480 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
SMG1P3-205ENST00000522480 GLI2P10070 1586 aa16.54■□□□□ 0.24
SMG1P3-205ENST00000522480 CROCC2H7BZ55 1655 aa16.53■□□□□ 0.24
SMG1P3-205ENST00000522480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
SMG1P3-205ENST00000522480 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
SMG1P3-205ENST00000522480 MAP3K4Q9Y6R4 1608 aa16.51■□□□□ 0.23
SMG1P3-205ENST00000522480 DNMT1P26358 1616 aaKnown RBP16.5■□□□□ 0.23
SMG1P3-205ENST00000522480 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
SMG1P3-205ENST00000522480 DIP2BQ9P265 1576 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms