RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
SPIDR-219ENST00000522321 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
SPIDR-219ENST00000522321 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
SPIDR-219ENST00000522321 LOC105371045A0A1W2PR82 267 aa19.89■□□□□ 0.77
SPIDR-219ENST00000522321 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
SPIDR-219ENST00000522321 CHD1O14646 1710 aa19.84■□□□□ 0.77
SPIDR-219ENST00000522321 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
SPIDR-219ENST00000522321 NUP160Q12769 1436 aa19.8■□□□□ 0.76
SPIDR-219ENST00000522321 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
SPIDR-219ENST00000522321 CTTNBP2Q8WZ74 1663 aa19.77■□□□□ 0.76
SPIDR-219ENST00000522321 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
SPIDR-219ENST00000522321 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
SPIDR-219ENST00000522321 IQGAP2Q13576 1575 aa19.74■□□□□ 0.75
SPIDR-219ENST00000522321 ARAP1Q96P48 1450 aa19.72■□□□□ 0.75
SPIDR-219ENST00000522321 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
SPIDR-219ENST00000522321 CLIP1P30622 1438 aa19.68■□□□□ 0.74
SPIDR-219ENST00000522321 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
SPIDR-219ENST00000522321 EFCAB5A4FU69 1503 aa19.63■□□□□ 0.73
SPIDR-219ENST00000522321 UGGT2Q9NYU1 1516 aa19.62■□□□□ 0.73
SPIDR-219ENST00000522321 JPH4Q96JJ6 628 aa19.6■□□□□ 0.73
SPIDR-219ENST00000522321 CARMIL2Q6F5E8 1435 aa19.59■□□□□ 0.73
SPIDR-219ENST00000522321 ARHGAP35Q9NRY4 1499 aa19.56■□□□□ 0.72
SPIDR-219ENST00000522321 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
SPIDR-219ENST00000522321 SAMD9Q5K651 1589 aa19.56■□□□□ 0.72
SPIDR-219ENST00000522321 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
SPIDR-219ENST00000522321 KIAA0556O60303 1618 aa19.54■□□□□ 0.72
SPIDR-219ENST00000522321 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
SPIDR-219ENST00000522321 FHOD3Q2V2M9 1422 aa19.53■□□□□ 0.72
SPIDR-219ENST00000522321 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
SPIDR-219ENST00000522321 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
SPIDR-219ENST00000522321 TTBK1Q5TCY1 1321 aaPredicted RBP19.49■□□□□ 0.71
SPIDR-219ENST00000522321 FMN1Q68DA7 1419 aa19.46■□□□□ 0.71
SPIDR-219ENST00000522321 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
SPIDR-219ENST00000522321 ERCC6L2Q5T890 1561 aa19.41■□□□□ 0.7
SPIDR-219ENST00000522321 PTPRGP23470 1445 aa19.4■□□□□ 0.7
SPIDR-219ENST00000522321 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
SPIDR-219ENST00000522321 PCF11O94913 1555 aaKnown RBP19.34■□□□□ 0.69
SPIDR-219ENST00000522321 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.68
SPIDR-219ENST00000522321 CASKIN1Q8WXD9 1431 aa19.33■□□□□ 0.68
SPIDR-219ENST00000522321 APLP2Q06481 763 aa19.32■□□□□ 0.68
SPIDR-219ENST00000522321 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
SPIDR-219ENST00000522321 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
SPIDR-219ENST00000522321 PLB1Q6P1J6 1458 aa19.29■□□□□ 0.68
SPIDR-219ENST00000522321 UACAQ9BZF9 1416 aa19.28■□□□□ 0.68
SPIDR-219ENST00000522321 ABCA8O94911 1581 aa19.26■□□□□ 0.67
SPIDR-219ENST00000522321 CCDC18Q5T9S5 1454 aa19.24■□□□□ 0.67
SPIDR-219ENST00000522321 ABCC2Q92887 1545 aa19.24■□□□□ 0.67
SPIDR-219ENST00000522321 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
SPIDR-219ENST00000522321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
SPIDR-219ENST00000522321 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
SPIDR-219ENST00000522321 NUP153P49790 1475 aaKnown RBP19.22■□□□□ 0.67
SPIDR-219ENST00000522321 UHRF1BP1LA0JNW5 1464 aa19.2■□□□□ 0.66
SPIDR-219ENST00000522321 EPRSP07814 1512 aaKnown RBP19.19■□□□□ 0.66
SPIDR-219ENST00000522321 CDK13Q14004 1512 aaKnown RBP19.16■□□□□ 0.66
SPIDR-219ENST00000522321 TIAM1Q13009 1591 aa19.16■□□□□ 0.66
SPIDR-219ENST00000522321 NPM1P06748 294 aaKnown RBP eCLIP19.15■□□□□ 0.66
SPIDR-219ENST00000522321 CFAP43Q8NDM7 1665 aa19.14■□□□□ 0.66
SPIDR-219ENST00000522321 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
SPIDR-219ENST00000522321 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
SPIDR-219ENST00000522321 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
SPIDR-219ENST00000522321 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
SPIDR-219ENST00000522321 ATP10BO94823 1461 aa19.1■□□□□ 0.65
SPIDR-219ENST00000522321 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
SPIDR-219ENST00000522321 EHBP1L1Q8N3D4 1523 aa19.08■□□□□ 0.64
SPIDR-219ENST00000522321 ZCCHC11Q5TAX3 1644 aaKnown RBP19.07■□□□□ 0.64
SPIDR-219ENST00000522321 FAM69CQ0P6D2 419 aa19.07■□□□□ 0.64
SPIDR-219ENST00000522321 LRRC9Q6ZRR7 1453 aa19.07■□□□□ 0.64
SPIDR-219ENST00000522321 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
SPIDR-219ENST00000522321 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
SPIDR-219ENST00000522321 PLEKHD1A6NEE1 506 aa19.05■□□□□ 0.64
SPIDR-219ENST00000522321 TROQ12816 1431 aaPredicted RBP19.02■□□□□ 0.64
SPIDR-219ENST00000522321 KANK4Q5T7N3 995 aaPredicted RBP19.02■□□□□ 0.64
SPIDR-219ENST00000522321 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
SPIDR-219ENST00000522321 WDR7Q9Y4E6 1490 aa18.98■□□□□ 0.63
SPIDR-219ENST00000522321 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
SPIDR-219ENST00000522321 KIF14Q15058 1648 aa18.97■□□□□ 0.63
SPIDR-219ENST00000522321 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
SPIDR-219ENST00000522321 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
SPIDR-219ENST00000522321 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
SPIDR-219ENST00000522321 ABCC10Q5T3U5 1492 aa18.94■□□□□ 0.62
SPIDR-219ENST00000522321 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
SPIDR-219ENST00000522321 KCNH8Q96L42 1107 aa18.92■□□□□ 0.62
SPIDR-219ENST00000522321 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
SPIDR-219ENST00000522321 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
SPIDR-219ENST00000522321 DIP2BQ9P265 1576 aa18.84■□□□□ 0.61
SPIDR-219ENST00000522321 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.61
SPIDR-219ENST00000522321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.6
SPIDR-219ENST00000522321 TTC37Q6PGP7 1564 aa18.82■□□□□ 0.6
SPIDR-219ENST00000522321 ITSN2Q9NZM3 1697 aa18.81■□□□□ 0.6
SPIDR-219ENST00000522321 KDM6BO15054 1643 aa18.81■□□□□ 0.6
SPIDR-219ENST00000522321 TSPOAP1O95153 1857 aa18.8■□□□□ 0.6
SPIDR-219ENST00000522321 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
SPIDR-219ENST00000522321 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
SPIDR-219ENST00000522321 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
SPIDR-219ENST00000522321 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
SPIDR-219ENST00000522321 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.6
SPIDR-219ENST00000522321 MIA2Q96PC5 1412 aa18.76■□□□□ 0.59
SPIDR-219ENST00000522321 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
SPIDR-219ENST00000522321 GLI2P10070 1586 aa18.75■□□□□ 0.59
SPIDR-219ENST00000522321 CD109Q6YHK3 1445 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms