RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 URB2Q14146 1524 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-232ENST00000522013 MROH2BQ7Z745 1585 aa9.92□□□□□ -0.82
CTNNA1-232ENST00000522013 ZNF608Q9ULD9 1512 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-232ENST00000522013 ABCB7O75027 752 aa9.9□□□□□ -0.82
CTNNA1-232ENST00000522013 PROM2Q8N271 834 aa9.9□□□□□ -0.82
CTNNA1-232ENST00000522013 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-232ENST00000522013 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
CTNNA1-232ENST00000522013 RSF1Q96T23 1441 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-232ENST00000522013 IFT140Q96RY7 1462 aa9.85□□□□□ -0.83
CTNNA1-232ENST00000522013 FBLN2P98095 1184 aa9.85□□□□□ -0.83
CTNNA1-232ENST00000522013 POLA2Q14181 598 aa9.85□□□□□ -0.83
CTNNA1-232ENST00000522013 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
CTNNA1-232ENST00000522013 WIZO95785 1651 aa9.85□□□□□ -0.83
CTNNA1-232ENST00000522013 CFTRP13569 1480 aa9.81□□□□□ -0.84
CTNNA1-232ENST00000522013 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-232ENST00000522013 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.858e-7■■■■■ 28.7
CTNNA1-232ENST00000522013 CLASP1Q7Z460 1538 aa9.74□□□□□ -0.85
CTNNA1-232ENST00000522013 TOPBP1Q92547 1522 aa9.74□□□□□ -0.85
CTNNA1-232ENST00000522013 IFNLR1Q8IU57 520 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-232ENST00000522013 KIF13AQ9H1H9 1805 aa9.72□□□□□ -0.85
CTNNA1-232ENST00000522013 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
CTNNA1-232ENST00000522013 TARBP1Q13395 1621 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-232ENST00000522013 GAPVD1Q14C86 1478 aa9.68□□□□□ -0.86
CTNNA1-232ENST00000522013 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
CTNNA1-232ENST00000522013 SNAPC4Q5SXM2 1469 aa9.66□□□□□ -0.86
CTNNA1-232ENST00000522013 ABCC8Q09428 1581 aa9.64□□□□□ -0.87
CTNNA1-232ENST00000522013 CHMP7Q8WUX9 453 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-232ENST00000522013 ZBTB12Q9Y330 459 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-232ENST00000522013 TOP2AP11388 1531 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-232ENST00000522013 KDM4FA0A1W2PPD8 638 aa9.62□□□□□ -0.87
CTNNA1-232ENST00000522013 PKD2Q13563 968 aa9.62□□□□□ -0.87
CTNNA1-232ENST00000522013 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
CTNNA1-232ENST00000522013 TSPOAP1O95153 1857 aa9.59□□□□□ -0.87
CTNNA1-232ENST00000522013 ERCC6L2Q5T890 1561 aa9.59□□□□□ -0.87
CTNNA1-232ENST00000522013 KDM6BO15054 1643 aa9.59□□□□□ -0.87
CTNNA1-232ENST00000522013 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-232ENST00000522013 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-232ENST00000522013 MAGI1Q96QZ7 1491 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-232ENST00000522013 RAD54L2Q9Y4B4 1467 aa9.58□□□□□ -0.88
CTNNA1-232ENST00000522013 PBRM1Q86U86 1689 aa9.58□□□□□ -0.88
CTNNA1-232ENST00000522013 HECW2Q9P2P5 1572 aa9.57□□□□□ -0.88
CTNNA1-232ENST00000522013 SYNJ2O15056 1496 aa9.55□□□□□ -0.88
CTNNA1-232ENST00000522013 WDR97A6NE52 1622 aa9.55□□□□□ -0.88
CTNNA1-232ENST00000522013 SOGA1O94964 1423 aa9.52□□□□□ -0.89
CTNNA1-232ENST00000522013 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-232ENST00000522013 ZNF692Q9BU19 519 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-232ENST00000522013 GRIN2BQ13224 1484 aa9.51□□□□□ -0.89
CTNNA1-232ENST00000522013 FAM69CQ0P6D2 419 aa9.5□□□□□ -0.89
CTNNA1-232ENST00000522013 SSUH2Q9Y2M2 353 aa9.5□□□□□ -0.89
CTNNA1-232ENST00000522013 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
CTNNA1-232ENST00000522013 CCDC88BA6NC98 1476 aa9.49□□□□□ -0.89
CTNNA1-232ENST00000522013 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
CTNNA1-232ENST00000522013 FBXO41Q8TF61 875 aa9.49□□□□□ -0.89
CTNNA1-232ENST00000522013 LMTK3Q96Q04 1460 aa9.48□□□□□ -0.89
CTNNA1-232ENST00000522013 DIP2BQ9P265 1576 aa9.48□□□□□ -0.89
CTNNA1-232ENST00000522013 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
CTNNA1-232ENST00000522013 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
CTNNA1-232ENST00000522013 ABCC10Q5T3U5 1492 aa9.47□□□□□ -0.89
CTNNA1-232ENST00000522013 POTEHQ6S545 545 aa9.46□□□□□ -0.9
CTNNA1-232ENST00000522013 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
CTNNA1-232ENST00000522013 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
CTNNA1-232ENST00000522013 HAP1P54257 671 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-232ENST00000522013 SPDYE2Q495Y8 402 aa9.45□□□□□ -0.9
CTNNA1-232ENST00000522013 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
CTNNA1-232ENST00000522013 SHROOM2Q13796 1616 aa9.43□□□□□ -0.9
CTNNA1-232ENST00000522013 ECM2O94769 699 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-232ENST00000522013 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
CTNNA1-232ENST00000522013 MAPKBP1O60336 1514 aa9.41□□□□□ -0.9
CTNNA1-232ENST00000522013 GRIN2AQ12879 1464 aa9.4□□□□□ -0.9
CTNNA1-232ENST00000522013 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTNNA1-232ENST00000522013 ABCA5Q8WWZ7 1642 aa9.38□□□□□ -0.91
CTNNA1-232ENST00000522013 PLCD3Q8N3E9 789 aa9.38□□□□□ -0.91
CTNNA1-232ENST00000522013 AKT1S1Q96B36 256 aa9.37□□□□□ -0.91
CTNNA1-232ENST00000522013 ADCY10Q96PN6 1610 aa9.37□□□□□ -0.91
CTNNA1-232ENST00000522013 ADAMTS12P58397 1594 aa9.37□□□□□ -0.91
CTNNA1-232ENST00000522013 CUX1P39880 1505 aa9.36□□□□□ -0.91
CTNNA1-232ENST00000522013 RGL2O15211 777 aa9.36□□□□□ -0.91
CTNNA1-232ENST00000522013 SOCS7O14512 581 aa9.35□□□□□ -0.91
CTNNA1-232ENST00000522013 NUP160Q12769 1436 aa9.35□□□□□ -0.91
CTNNA1-232ENST00000522013 MIER1Q8N108 512 aa9.35□□□□□ -0.91
CTNNA1-232ENST00000522013 PRG4Q92954 1404 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-232ENST00000522013 PPRC1Q5VV67 1664 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-232ENST00000522013 CHRDL2Q6WN34 429 aa9.33□□□□□ -0.92
CTNNA1-232ENST00000522013 ILDR2Q71H61 639 aa9.33□□□□□ -0.92
CTNNA1-232ENST00000522013 REM2Q8IYK8 340 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-232ENST00000522013 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-232ENST00000522013 DISP3Q9P2K9 1392 aa9.32□□□□□ -0.92
CTNNA1-232ENST00000522013 TOP2BQ02880 1626 aa9.31□□□□□ -0.92
CTNNA1-232ENST00000522013 ABCA10Q8WWZ4 1543 aa9.3□□□□□ -0.92
CTNNA1-232ENST00000522013 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
CTNNA1-232ENST00000522013 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-232ENST00000522013 KDM2AQ9Y2K7 1162 aa9.27□□□□□ -0.93
CTNNA1-232ENST00000522013 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-232ENST00000522013 RUSC2Q8N2Y8 1516 aa9.26□□□□□ -0.93
CTNNA1-232ENST00000522013 FHAD1B1AJZ9 1412 aa9.25□□□□□ -0.93
CTNNA1-232ENST00000522013 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
CTNNA1-232ENST00000522013 SPATA31D1Q6ZQQ2 1576 aa9.24□□□□□ -0.93
CTNNA1-232ENST00000522013 CUL7Q14999 1698 aa9.24□□□□□ -0.93
CTNNA1-232ENST00000522013 CFAP44Q96MT7 982 aa9.24□□□□□ -0.93
CTNNA1-232ENST00000522013 CIZ1Q9ULV3 898 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms