RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 LOC105371045A0A1W2PR82 267 aa39.39■■■■□ 3.9
PVT1-212ENST00000521951 KIAA0586Q9BVV6 1533 aa39.36■■■■□ 3.89
PVT1-212ENST00000521951 CTTNBP2Q8WZ74 1663 aa39.36■■■■□ 3.89
PVT1-212ENST00000521951 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
PVT1-212ENST00000521951 IQGAP2Q13576 1575 aa39.26■■■■□ 3.87
PVT1-212ENST00000521951 TNIKQ9UKE5 1360 aa39.2■■■■□ 3.87
PVT1-212ENST00000521951 JPH4Q96JJ6 628 aa39.19■■■■□ 3.86
PVT1-212ENST00000521951 SHROOM2Q13796 1616 aa39.14■■■■□ 3.86
PVT1-212ENST00000521951 UGGT2Q9NYU1 1516 aa39.07■■■■□ 3.85
PVT1-212ENST00000521951 RANGAP1P46060 587 aaPredicted RBP39.05■■■■□ 3.84
PVT1-212ENST00000521951 PRG4Q92954 1404 aaPredicted RBP39.02■■■■□ 3.84
PVT1-212ENST00000521951 DISP1Q96F81 1524 aa38.94■■■■□ 3.82
PVT1-212ENST00000521951 ERCC6L2Q5T890 1561 aa38.94■■■■□ 3.82
PVT1-212ENST00000521951 CARMIL2Q6F5E8 1435 aa38.91■■■■□ 3.82
PVT1-212ENST00000521951 SAMD9Q5K651 1589 aa38.89■■■■□ 3.82
PVT1-212ENST00000521951 CEP162Q5TB80 1403 aa38.88■■■■□ 3.81
PVT1-212ENST00000521951 KIAA0556O60303 1618 aa38.87■■■■□ 3.81
PVT1-212ENST00000521951 ARHGEF11O15085 1522 aa38.86■■■■□ 3.81
PVT1-212ENST00000521951 CLIP1P30622 1438 aa38.85■■■■□ 3.81
PVT1-212ENST00000521951 DNAJC5Q9H3Z4 198 aa38.85■■■■□ 3.81
PVT1-212ENST00000521951 EFCAB5A4FU69 1503 aa38.85■■■■□ 3.81
PVT1-212ENST00000521951 P3H3Q8IVL6 736 aa38.84■■■■□ 3.81
PVT1-212ENST00000521951 ARHGAP35Q9NRY4 1499 aa38.82■■■■□ 3.81
PVT1-212ENST00000521951 RIMBP3CA6NJZ7 1639 aa38.8■■■■□ 3.8
PVT1-212ENST00000521951 RIMBP3BA6NNM3 1639 aa38.8■■■■□ 3.8
PVT1-212ENST00000521951 RIMBP3Q9UFD9 1639 aa38.8■■■■□ 3.8
PVT1-212ENST00000521951 FHOD3Q2V2M9 1422 aa38.72■■■■□ 3.79
PVT1-212ENST00000521951 TTBK1Q5TCY1 1321 aaPredicted RBP38.67■■■■□ 3.78
PVT1-212ENST00000521951 PTPRGP23470 1445 aa38.65■■■■□ 3.78
PVT1-212ENST00000521951 ARAP1Q96P48 1450 aa38.64■■■■□ 3.78
PVT1-212ENST00000521951 CYB5RLQ6IPT4 315 aa38.51■■■■□ 3.76
PVT1-212ENST00000521951 FMN1Q68DA7 1419 aa38.5■■■■□ 3.75
PVT1-212ENST00000521951 PLB1Q6P1J6 1458 aa38.43■■■■□ 3.74
PVT1-212ENST00000521951 UACAQ9BZF9 1416 aa38.41■■■■□ 3.74
PVT1-212ENST00000521951 ABCA8O94911 1581 aa38.4■■■■□ 3.74
PVT1-212ENST00000521951 RAPGEF6Q8TEU7 1601 aa38.36■■■■□ 3.73
PVT1-212ENST00000521951 VPS8Q8N3P4 1428 aa38.35■■■■□ 3.73
PVT1-212ENST00000521951 ABCC2Q92887 1545 aa38.32■■■■□ 3.72
PVT1-212ENST00000521951 UHRF1BP1LA0JNW5 1464 aa38.32■■■■□ 3.72
PVT1-212ENST00000521951 ADCY10Q96PN6 1610 aa38.3■■■■□ 3.72
PVT1-212ENST00000521951 PCF11O94913 1555 aaKnown RBP38.29■■■■□ 3.72
PVT1-212ENST00000521951 CASKIN1Q8WXD9 1431 aa38.29■■■■□ 3.72
PVT1-212ENST00000521951 ATP1B4Q9UN42 357 aaPredicted RBP38.26■■■■□ 3.72
PVT1-212ENST00000521951 NUP153P49790 1475 aaKnown RBP38.23■■■■□ 3.71
PVT1-212ENST00000521951 FYCO1Q9BQS8 1478 aa38.23■■■■□ 3.71
PVT1-212ENST00000521951 HECW1Q76N89 1606 aa38.22■■■■□ 3.71
PVT1-212ENST00000521951 ARID3CA6NKF2 412 aa38.17■■■■□ 3.7
PVT1-212ENST00000521951 KDM5BQ9UGL1 1544 aa38.14■■■■□ 3.7
PVT1-212ENST00000521951 ATP10BO94823 1461 aa38.12■■■■□ 3.69
PVT1-212ENST00000521951 LRRIQ1Q96JM4 1722 aa38.12■■■■□ 3.69
PVT1-212ENST00000521951 EPRSP07814 1512 aaKnown RBP38.11■■■■□ 3.69
PVT1-212ENST00000521951 NPM1P06748 294 aaKnown RBP eCLIP38.1■■■■□ 3.69
PVT1-212ENST00000521951 ZCCHC11Q5TAX3 1644 aaKnown RBP38.08■■■■□ 3.69
PVT1-212ENST00000521951 CDK13Q14004 1512 aaKnown RBP38.06■■■■□ 3.68
PVT1-212ENST00000521951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.03■■■■□ 3.68
PVT1-212ENST00000521951 HNRNPUL2Q1KMD3 747 aaKnown RBP38.03■■■■□ 3.68
PVT1-212ENST00000521951 CCDC18Q5T9S5 1454 aa38.03■■■■□ 3.68
PVT1-212ENST00000521951 APLP2Q06481 763 aa37.92■■■■□ 3.66
PVT1-212ENST00000521951 TIAM1Q13009 1591 aa37.91■■■■□ 3.66
PVT1-212ENST00000521951 CFAP43Q8NDM7 1665 aa37.9■■■■□ 3.66
PVT1-212ENST00000521951 MAP3K1Q13233 1512 aa37.89■■■■□ 3.66
PVT1-212ENST00000521951 CDK11AQ9UQ88 783 aaPredicted RBP37.88■■■■□ 3.65
PVT1-212ENST00000521951 ASXL2Q76L83 1435 aa37.87■■■■□ 3.65
PVT1-212ENST00000521951 MAPKBP1O60336 1514 aa37.87■■■■□ 3.65
PVT1-212ENST00000521951 PLEKHD1A6NEE1 506 aa37.87■■■■□ 3.65
PVT1-212ENST00000521951 MAGI3Q5TCQ9 1506 aa37.81■■■■□ 3.64
PVT1-212ENST00000521951 WDR7Q9Y4E6 1490 aa37.8■■■■□ 3.64
PVT1-212ENST00000521951 KANK4Q5T7N3 995 aaPredicted RBP37.77■■■■□ 3.64
PVT1-212ENST00000521951 TROQ12816 1431 aaPredicted RBP37.75■■■■□ 3.63
PVT1-212ENST00000521951 MTUS2Q5JR59 1369 aa37.75■■■■□ 3.63
PVT1-212ENST00000521951 LRRC9Q6ZRR7 1453 aa37.74■■■■□ 3.63
PVT1-212ENST00000521951 KCNH8Q96L42 1107 aa37.72■■■■□ 3.63
PVT1-212ENST00000521951 EHBP1L1Q8N3D4 1523 aa37.68■■■■□ 3.62
PVT1-212ENST00000521951 ABCC10Q5T3U5 1492 aa37.62■■■■□ 3.61
PVT1-212ENST00000521951 PPARGC1BQ86YN6 1023 aaKnown RBP37.61■■■■□ 3.61
PVT1-212ENST00000521951 KIF14Q15058 1648 aa37.61■■■■□ 3.61
PVT1-212ENST00000521951 DIP2BQ9P265 1576 aa37.58■■■■□ 3.61
PVT1-212ENST00000521951 SUPT6HQ7KZ85 1726 aaKnown RBP37.55■■■■□ 3.6
PVT1-212ENST00000521951 FAM69CQ0P6D2 419 aa37.54■■■■□ 3.6
PVT1-212ENST00000521951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.53■■■■□ 3.6
PVT1-212ENST00000521951 GLI2P10070 1586 aa37.53■■■■□ 3.6
PVT1-212ENST00000521951 KIF13AQ9H1H9 1805 aa37.52■■■■□ 3.6
PVT1-212ENST00000521951 ABCA9Q8IUA7 1624 aa37.5■■■■□ 3.59
PVT1-212ENST00000521951 NCOA2Q15596 1464 aa37.49■■■■□ 3.59
PVT1-212ENST00000521951 TTC37Q6PGP7 1564 aa37.48■■■■□ 3.59
PVT1-212ENST00000521951 TRHP20396 242 aaPredicted RBP37.45■■■■□ 3.59
PVT1-212ENST00000521951 MAP3K4Q9Y6R4 1608 aa37.4■■■■□ 3.58
PVT1-212ENST00000521951 CD109Q6YHK3 1445 aa37.39■■■■□ 3.58
PVT1-212ENST00000521951 CCNB3Q8WWL7 1395 aa37.38■■■■□ 3.57
PVT1-212ENST00000521951 MYO5CQ9NQX4 1742 aa37.35■■■■□ 3.57
PVT1-212ENST00000521951 CDC42BPAQ5VT25 1732 aa37.34■■■■□ 3.57
PVT1-212ENST00000521951 GPATCH8Q9UKJ3 1502 aaKnown RBP37.34■■■■□ 3.57
PVT1-212ENST00000521951 PHLDB1Q86UU1 1377 aa37.33■■■■□ 3.57
PVT1-212ENST00000521951 PLCH2O75038 1416 aa37.32■■■■□ 3.56
PVT1-212ENST00000521951 TSPOAP1O95153 1857 aa37.3■■■■□ 3.56
PVT1-212ENST00000521951 PREX2Q70Z35 1606 aa37.29■■■■□ 3.56
PVT1-212ENST00000521951 CDC42BPBQ9Y5S2 1711 aa37.28■■■■□ 3.56
PVT1-212ENST00000521951 MYOM3Q5VTT5 1437 aa37.27■■■■□ 3.56
PVT1-212ENST00000521951 ITSN2Q9NZM3 1697 aa37.27■■■■□ 3.56
PVT1-212ENST00000521951 ARAP3Q8WWN8 1544 aa37.24■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms