RNA–Protein interactions for RNA: ENST00000521398.5

LAMA4-215, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-215ENST00000521398 CTTNBP2Q8WZ74 1663 aa31.84■■■□□ 2.69
LAMA4-215ENST00000521398 IQGAP2Q13576 1575 aa31.79■■■□□ 2.68
LAMA4-215ENST00000521398 UBTFP17480 764 aaKnown RBP31.76■■■□□ 2.68
LAMA4-215ENST00000521398 SHROOM2Q13796 1616 aa31.73■■■□□ 2.67
LAMA4-215ENST00000521398 EHMT2Q96KQ7 1210 aa31.72■■■□□ 2.67
LAMA4-215ENST00000521398 JPH4Q96JJ6 628 aa31.68■■■□□ 2.66
LAMA4-215ENST00000521398 TNIKQ9UKE5 1360 aa31.66■■■□□ 2.66
LAMA4-215ENST00000521398 UGGT2Q9NYU1 1516 aa31.65■■■□□ 2.66
LAMA4-215ENST00000521398 LOC105371045A0A1W2PR82 267 aa31.59■■■□□ 2.65
LAMA4-215ENST00000521398 PRG4Q92954 1404 aaPredicted RBP31.57■■■□□ 2.64
LAMA4-215ENST00000521398 CARMIL2Q6F5E8 1435 aa31.54■■■□□ 2.64
LAMA4-215ENST00000521398 DNAJC5Q9H3Z4 198 aa31.53■■■□□ 2.64
LAMA4-215ENST00000521398 ARHGEF11O15085 1522 aa31.51■■■□□ 2.64
LAMA4-215ENST00000521398 DISP1Q96F81 1524 aa31.5■■■□□ 2.63
LAMA4-215ENST00000521398 EFCAB5A4FU69 1503 aa31.48■■■□□ 2.63
LAMA4-215ENST00000521398 SAMD9Q5K651 1589 aa31.47■■■□□ 2.63
LAMA4-215ENST00000521398 KIAA0556O60303 1618 aa31.47■■■□□ 2.63
LAMA4-215ENST00000521398 ERCC6L2Q5T890 1561 aa31.45■■■□□ 2.62
LAMA4-215ENST00000521398 RIMBP3CA6NJZ7 1639 aa31.43■■■□□ 2.62
LAMA4-215ENST00000521398 RIMBP3BA6NNM3 1639 aa31.43■■■□□ 2.62
LAMA4-215ENST00000521398 RIMBP3Q9UFD9 1639 aa31.43■■■□□ 2.62
LAMA4-215ENST00000521398 RANGAP1P46060 587 aaPredicted RBP31.39■■■□□ 2.62
LAMA4-215ENST00000521398 CLIP1P30622 1438 aa31.37■■■□□ 2.61
LAMA4-215ENST00000521398 CEP162Q5TB80 1403 aa31.37■■■□□ 2.61
LAMA4-215ENST00000521398 ARHGAP35Q9NRY4 1499 aa31.36■■■□□ 2.61
LAMA4-215ENST00000521398 PTPRGP23470 1445 aa31.29■■■□□ 2.6
LAMA4-215ENST00000521398 ARAP1Q96P48 1450 aa31.28■■■□□ 2.6
LAMA4-215ENST00000521398 P3H3Q8IVL6 736 aa31.26■■■□□ 2.6
LAMA4-215ENST00000521398 FHOD3Q2V2M9 1422 aa31.26■■■□□ 2.6
LAMA4-215ENST00000521398 FMN1Q68DA7 1419 aa31.18■■■□□ 2.58
LAMA4-215ENST00000521398 TTBK1Q5TCY1 1321 aaPredicted RBP31.13■■■□□ 2.57
LAMA4-215ENST00000521398 CYB5RLQ6IPT4 315 aa31.13■■■□□ 2.57
LAMA4-215ENST00000521398 UACAQ9BZF9 1416 aa31.11■■■□□ 2.57
LAMA4-215ENST00000521398 ABCA8O94911 1581 aa31.09■■■□□ 2.57
LAMA4-215ENST00000521398 UHRF1BP1LA0JNW5 1464 aa31.08■■■□□ 2.57
LAMA4-215ENST00000521398 PLB1Q6P1J6 1458 aa31.06■■■□□ 2.56
LAMA4-215ENST00000521398 ABCC2Q92887 1545 aa31.05■■■□□ 2.56
LAMA4-215ENST00000521398 RAPGEF6Q8TEU7 1601 aa31.04■■■□□ 2.56
LAMA4-215ENST00000521398 ADCY10Q96PN6 1610 aa31.01■■■□□ 2.55
LAMA4-215ENST00000521398 VPS8Q8N3P4 1428 aa30.99■■■□□ 2.55
LAMA4-215ENST00000521398 CASKIN1Q8WXD9 1431 aa30.98■■■□□ 2.55
LAMA4-215ENST00000521398 FYCO1Q9BQS8 1478 aa30.95■■■□□ 2.55
LAMA4-215ENST00000521398 HECW1Q76N89 1606 aa30.95■■■□□ 2.54
LAMA4-215ENST00000521398 PCF11O94913 1555 aaKnown RBP30.93■■■□□ 2.54
LAMA4-215ENST00000521398 NUP153P49790 1475 aaKnown RBP30.92■■■□□ 2.54
LAMA4-215ENST00000521398 KDM5BQ9UGL1 1544 aa30.91■■■□□ 2.54
LAMA4-215ENST00000521398 NPM1P06748 294 aaKnown RBP eCLIP30.87■■■□□ 2.53
LAMA4-215ENST00000521398 ZCCHC11Q5TAX3 1644 aaKnown RBP30.82■■■□□ 2.52
LAMA4-215ENST00000521398 ATP10BO94823 1461 aa30.82■■■□□ 2.52
LAMA4-215ENST00000521398 CCDC18Q5T9S5 1454 aa30.82■■■□□ 2.52
LAMA4-215ENST00000521398 EPRSP07814 1512 aaKnown RBP30.81■■■□□ 2.52
LAMA4-215ENST00000521398 ATP1B4Q9UN42 357 aaPredicted RBP30.81■■■□□ 2.52
LAMA4-215ENST00000521398 MAPKBP1O60336 1514 aa30.75■■■□□ 2.51
LAMA4-215ENST00000521398 LRRIQ1Q96JM4 1722 aa30.75■■■□□ 2.51
LAMA4-215ENST00000521398 CDK13Q14004 1512 aaKnown RBP30.73■■■□□ 2.51
LAMA4-215ENST00000521398 ARID3CA6NKF2 412 aa30.72■■■□□ 2.51
LAMA4-215ENST00000521398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.7■■■□□ 2.5
LAMA4-215ENST00000521398 HNRNPUL2Q1KMD3 747 aaKnown RBP30.7■■■□□ 2.5
LAMA4-215ENST00000521398 MAP3K1Q13233 1512 aa30.68■■■□□ 2.5
LAMA4-215ENST00000521398 CDK11AQ9UQ88 783 aaPredicted RBP30.68■■■□□ 2.5
LAMA4-215ENST00000521398 ASXL2Q76L83 1435 aa30.66■■■□□ 2.5
LAMA4-215ENST00000521398 CFAP43Q8NDM7 1665 aa30.65■■■□□ 2.5
LAMA4-215ENST00000521398 WDR7Q9Y4E6 1490 aa30.63■■■□□ 2.49
LAMA4-215ENST00000521398 TIAM1Q13009 1591 aa30.63■■■□□ 2.49
LAMA4-215ENST00000521398 APLP2Q06481 763 aa30.63■■■□□ 2.49
LAMA4-215ENST00000521398 PLEKHD1A6NEE1 506 aa30.62■■■□□ 2.49
LAMA4-215ENST00000521398 TROQ12816 1431 aaPredicted RBP30.56■■■□□ 2.48
LAMA4-215ENST00000521398 MTUS2Q5JR59 1369 aa30.52■■■□□ 2.48
LAMA4-215ENST00000521398 MAGI3Q5TCQ9 1506 aa30.51■■■□□ 2.47
LAMA4-215ENST00000521398 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.47
LAMA4-215ENST00000521398 ABCC10Q5T3U5 1492 aa30.5■■■□□ 2.47
LAMA4-215ENST00000521398 LRRC9Q6ZRR7 1453 aa30.49■■■□□ 2.47
LAMA4-215ENST00000521398 DIP2BQ9P265 1576 aa30.47■■■□□ 2.47
LAMA4-215ENST00000521398 GLI2P10070 1586 aa30.45■■■□□ 2.47
LAMA4-215ENST00000521398 KIF14Q15058 1648 aa30.45■■■□□ 2.46
LAMA4-215ENST00000521398 KCNH8Q96L42 1107 aa30.44■■■□□ 2.46
LAMA4-215ENST00000521398 KANK4Q5T7N3 995 aaPredicted RBP30.4■■■□□ 2.46
LAMA4-215ENST00000521398 ABCA9Q8IUA7 1624 aa30.38■■■□□ 2.45
LAMA4-215ENST00000521398 KIF13AQ9H1H9 1805 aa30.37■■■□□ 2.45
LAMA4-215ENST00000521398 SUPT6HQ7KZ85 1726 aaKnown RBP30.37■■■□□ 2.45
LAMA4-215ENST00000521398 FAM69CQ0P6D2 419 aa30.37■■■□□ 2.45
LAMA4-215ENST00000521398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.35■■■□□ 2.45
LAMA4-215ENST00000521398 MAP3K4Q9Y6R4 1608 aa30.31■■■□□ 2.44
LAMA4-215ENST00000521398 TTC37Q6PGP7 1564 aa30.3■■■□□ 2.44
LAMA4-215ENST00000521398 TRHP20396 242 aaPredicted RBP30.3■■■□□ 2.44
LAMA4-215ENST00000521398 NCOA2Q15596 1464 aa30.29■■■□□ 2.44
LAMA4-215ENST00000521398 CD109Q6YHK3 1445 aa30.26■■■□□ 2.44
LAMA4-215ENST00000521398 MYO5CQ9NQX4 1742 aa30.23■■■□□ 2.43
LAMA4-215ENST00000521398 ARAP3Q8WWN8 1544 aa30.23■■■□□ 2.43
LAMA4-215ENST00000521398 CCNB3Q8WWL7 1395 aa30.22■■■□□ 2.43
LAMA4-215ENST00000521398 PLCH2O75038 1416 aa30.2■■■□□ 2.43
LAMA4-215ENST00000521398 GPATCH8Q9UKJ3 1502 aaKnown RBP30.19■■■□□ 2.42
LAMA4-215ENST00000521398 PREX2Q70Z35 1606 aa30.19■■■□□ 2.42
LAMA4-215ENST00000521398 ITSN2Q9NZM3 1697 aa30.19■■■□□ 2.42
LAMA4-215ENST00000521398 CDC42BPAQ5VT25 1732 aa30.18■■■□□ 2.42
LAMA4-215ENST00000521398 TEX14Q8IWB6 1497 aa30.16■■■□□ 2.42
LAMA4-215ENST00000521398 PPRC1Q5VV67 1664 aaKnown RBP30.13■■■□□ 2.41
LAMA4-215ENST00000521398 MYOM3Q5VTT5 1437 aa30.13■■■□□ 2.41
LAMA4-215ENST00000521398 CDC42BPBQ9Y5S2 1711 aa30.12■■■□□ 2.41
LAMA4-215ENST00000521398 TSPOAP1O95153 1857 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms