RNA–Protein interactions for RNA: ENST00000521344.1

PCMTD1-206, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3 BASIC

Gene PCMTD1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-206ENST00000521344 CTTNBP2Q8WZ74 1663 aa28.21■■■□□ 2.11
PCMTD1-206ENST00000521344 KIAA0586Q9BVV6 1533 aa28.17■■■□□ 2.1
PCMTD1-206ENST00000521344 UBTFP17480 764 aaKnown RBP28.15■■■□□ 2.1
PCMTD1-206ENST00000521344 IQGAP2Q13576 1575 aa28.12■■■□□ 2.09
PCMTD1-206ENST00000521344 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
PCMTD1-206ENST00000521344 SHROOM2Q13796 1616 aa28.06■■■□□ 2.08
PCMTD1-206ENST00000521344 JPH4Q96JJ6 628 aa28.05■■■□□ 2.08
PCMTD1-206ENST00000521344 TNIKQ9UKE5 1360 aa27.98■■■□□ 2.07
PCMTD1-206ENST00000521344 UGGT2Q9NYU1 1516 aa27.96■■■□□ 2.07
PCMTD1-206ENST00000521344 PRG4Q92954 1404 aaPredicted RBP27.94■■■□□ 2.06
PCMTD1-206ENST00000521344 RANGAP1P46060 587 aaPredicted RBP27.92■■■□□ 2.06
PCMTD1-206ENST00000521344 DNAJC5Q9H3Z4 198 aa27.92■■■□□ 2.06
PCMTD1-206ENST00000521344 ERCC6L2Q5T890 1561 aa27.91■■■□□ 2.06
PCMTD1-206ENST00000521344 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
PCMTD1-206ENST00000521344 DISP1Q96F81 1524 aa27.88■■■□□ 2.05
PCMTD1-206ENST00000521344 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
PCMTD1-206ENST00000521344 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
PCMTD1-206ENST00000521344 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
PCMTD1-206ENST00000521344 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
PCMTD1-206ENST00000521344 KIAA0556O60303 1618 aa27.84■■■□□ 2.05
PCMTD1-206ENST00000521344 SAMD9Q5K651 1589 aa27.84■■■□□ 2.05
PCMTD1-206ENST00000521344 EFCAB5A4FU69 1503 aa27.79■■■□□ 2.04
PCMTD1-206ENST00000521344 P3H3Q8IVL6 736 aa27.78■■■□□ 2.04
PCMTD1-206ENST00000521344 CEP162Q5TB80 1403 aa27.76■■■□□ 2.03
PCMTD1-206ENST00000521344 ARHGAP35Q9NRY4 1499 aa27.75■■■□□ 2.03
PCMTD1-206ENST00000521344 CLIP1P30622 1438 aa27.75■■■□□ 2.03
PCMTD1-206ENST00000521344 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
PCMTD1-206ENST00000521344 FHOD3Q2V2M9 1422 aa27.69■■■□□ 2.02
PCMTD1-206ENST00000521344 TTBK1Q5TCY1 1321 aaPredicted RBP27.68■■■□□ 2.02
PCMTD1-206ENST00000521344 PTPRGP23470 1445 aa27.67■■■□□ 2.02
PCMTD1-206ENST00000521344 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
PCMTD1-206ENST00000521344 FMN1Q68DA7 1419 aa27.52■■■□□ 2
PCMTD1-206ENST00000521344 PLB1Q6P1J6 1458 aa27.52■■■□□ 2
PCMTD1-206ENST00000521344 ABCA8O94911 1581 aa27.5■■□□□ 1.99
PCMTD1-206ENST00000521344 UACAQ9BZF9 1416 aa27.5■■□□□ 1.99
PCMTD1-206ENST00000521344 RAPGEF6Q8TEU7 1601 aa27.47■■□□□ 1.99
PCMTD1-206ENST00000521344 ADCY10Q96PN6 1610 aa27.47■■□□□ 1.99
PCMTD1-206ENST00000521344 ABCC2Q92887 1545 aa27.44■■□□□ 1.98
PCMTD1-206ENST00000521344 UHRF1BP1LA0JNW5 1464 aa27.43■■□□□ 1.98
PCMTD1-206ENST00000521344 PCF11O94913 1555 aaKnown RBP27.4■■□□□ 1.98
PCMTD1-206ENST00000521344 VPS8Q8N3P4 1428 aa27.39■■□□□ 1.97
PCMTD1-206ENST00000521344 CASKIN1Q8WXD9 1431 aa27.38■■□□□ 1.97
PCMTD1-206ENST00000521344 NUP153P49790 1475 aaKnown RBP27.36■■□□□ 1.97
PCMTD1-206ENST00000521344 ATP1B4Q9UN42 357 aaPredicted RBP27.36■■□□□ 1.97
PCMTD1-206ENST00000521344 HECW1Q76N89 1606 aa27.35■■□□□ 1.97
PCMTD1-206ENST00000521344 FYCO1Q9BQS8 1478 aa27.34■■□□□ 1.97
PCMTD1-206ENST00000521344 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.97
PCMTD1-206ENST00000521344 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
PCMTD1-206ENST00000521344 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
PCMTD1-206ENST00000521344 ZCCHC11Q5TAX3 1644 aaKnown RBP27.3■■□□□ 1.96
PCMTD1-206ENST00000521344 NPM1P06748 294 aaKnown RBP eCLIP27.29■■□□□ 1.96
PCMTD1-206ENST00000521344 ATP10BO94823 1461 aa27.28■■□□□ 1.96
PCMTD1-206ENST00000521344 EPRSP07814 1512 aaKnown RBP27.26■■□□□ 1.96
PCMTD1-206ENST00000521344 CDK13Q14004 1512 aaKnown RBP27.23■■□□□ 1.95
PCMTD1-206ENST00000521344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.21■■□□□ 1.95
PCMTD1-206ENST00000521344 HNRNPUL2Q1KMD3 747 aaKnown RBP27.21■■□□□ 1.95
PCMTD1-206ENST00000521344 CCDC18Q5T9S5 1454 aa27.2■■□□□ 1.95
PCMTD1-206ENST00000521344 MAPKBP1O60336 1514 aa27.16■■□□□ 1.94
PCMTD1-206ENST00000521344 ASXL2Q76L83 1435 aa27.13■■□□□ 1.93
PCMTD1-206ENST00000521344 CFAP43Q8NDM7 1665 aa27.12■■□□□ 1.93
PCMTD1-206ENST00000521344 TIAM1Q13009 1591 aa27.11■■□□□ 1.93
PCMTD1-206ENST00000521344 PLEKHD1A6NEE1 506 aa27.09■■□□□ 1.93
PCMTD1-206ENST00000521344 CDK11AQ9UQ88 783 aaPredicted RBP27.08■■□□□ 1.93
PCMTD1-206ENST00000521344 MAP3K1Q13233 1512 aa27.08■■□□□ 1.93
PCMTD1-206ENST00000521344 APLP2Q06481 763 aa27.07■■□□□ 1.92
PCMTD1-206ENST00000521344 WDR7Q9Y4E6 1490 aa27.07■■□□□ 1.92
PCMTD1-206ENST00000521344 MAGI3Q5TCQ9 1506 aa27.05■■□□□ 1.92
PCMTD1-206ENST00000521344 KCNH8Q96L42 1107 aa27.01■■□□□ 1.91
PCMTD1-206ENST00000521344 TROQ12816 1431 aaPredicted RBP27■■□□□ 1.91
PCMTD1-206ENST00000521344 MTUS2Q5JR59 1369 aa26.98■■□□□ 1.91
PCMTD1-206ENST00000521344 KANK4Q5T7N3 995 aaPredicted RBP26.98■■□□□ 1.91
PCMTD1-206ENST00000521344 LRRC9Q6ZRR7 1453 aa26.97■■□□□ 1.91
PCMTD1-206ENST00000521344 ABCC10Q5T3U5 1492 aa26.96■■□□□ 1.91
PCMTD1-206ENST00000521344 DIP2BQ9P265 1576 aa26.96■■□□□ 1.91
PCMTD1-206ENST00000521344 KIF13AQ9H1H9 1805 aa26.96■■□□□ 1.91
PCMTD1-206ENST00000521344 EHBP1L1Q8N3D4 1523 aa26.95■■□□□ 1.9
PCMTD1-206ENST00000521344 KIF14Q15058 1648 aa26.94■■□□□ 1.9
PCMTD1-206ENST00000521344 FAM69CQ0P6D2 419 aa26.9■■□□□ 1.9
PCMTD1-206ENST00000521344 GLI2P10070 1586 aa26.9■■□□□ 1.9
PCMTD1-206ENST00000521344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.88■■□□□ 1.89
PCMTD1-206ENST00000521344 ABCA9Q8IUA7 1624 aa26.87■■□□□ 1.89
PCMTD1-206ENST00000521344 SUPT6HQ7KZ85 1726 aaKnown RBP26.87■■□□□ 1.89
PCMTD1-206ENST00000521344 TRHP20396 242 aaPredicted RBP26.86■■□□□ 1.89
PCMTD1-206ENST00000521344 TTC37Q6PGP7 1564 aa26.85■■□□□ 1.89
PCMTD1-206ENST00000521344 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
PCMTD1-206ENST00000521344 MAP3K4Q9Y6R4 1608 aa26.83■■□□□ 1.89
PCMTD1-206ENST00000521344 NCOA2Q15596 1464 aa26.81■■□□□ 1.88
PCMTD1-206ENST00000521344 TSPOAP1O95153 1857 aa26.79■■□□□ 1.88
PCMTD1-206ENST00000521344 MYO5CQ9NQX4 1742 aa26.77■■□□□ 1.88
PCMTD1-206ENST00000521344 CD109Q6YHK3 1445 aa26.77■■□□□ 1.88
PCMTD1-206ENST00000521344 CDC42BPAQ5VT25 1732 aa26.77■■□□□ 1.88
PCMTD1-206ENST00000521344 CDC42BPBQ9Y5S2 1711 aa26.73■■□□□ 1.87
PCMTD1-206ENST00000521344 CCNB3Q8WWL7 1395 aa26.72■■□□□ 1.87
PCMTD1-206ENST00000521344 PPRC1Q5VV67 1664 aaKnown RBP26.72■■□□□ 1.87
PCMTD1-206ENST00000521344 GPATCH8Q9UKJ3 1502 aaKnown RBP26.71■■□□□ 1.87
PCMTD1-206ENST00000521344 PREX2Q70Z35 1606 aa26.71■■□□□ 1.87
PCMTD1-206ENST00000521344 PLCH2O75038 1416 aa26.7■■□□□ 1.87
PCMTD1-206ENST00000521344 ITSN2Q9NZM3 1697 aa26.69■■□□□ 1.86
PCMTD1-206ENST00000521344 PHLDB1Q86UU1 1377 aa26.67■■□□□ 1.86
PCMTD1-206ENST00000521344 ARAP3Q8WWN8 1544 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms