RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
PVT1-209ENST00000520913 KIAA0586Q9BVV6 1533 aa18.58■□□□□ 0.56
PVT1-209ENST00000520913 IQGAP2Q13576 1575 aa18.52■□□□□ 0.56
PVT1-209ENST00000520913 JPH4Q96JJ6 628 aa18.52■□□□□ 0.56
PVT1-209ENST00000520913 CARMIL1Q5VZK9 1371 aa18.52■□□□□ 0.55
PVT1-209ENST00000520913 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
PVT1-209ENST00000520913 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
PVT1-209ENST00000520913 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
PVT1-209ENST00000520913 RAPGEF2Q9Y4G8 1499 aa18.44■□□□□ 0.54
PVT1-209ENST00000520913 MAPKBP1O60336 1514 aa18.41■□□□□ 0.54
PVT1-209ENST00000520913 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
PVT1-209ENST00000520913 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
PVT1-209ENST00000520913 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
PVT1-209ENST00000520913 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
PVT1-209ENST00000520913 DISP1Q96F81 1524 aa18.33■□□□□ 0.53
PVT1-209ENST00000520913 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
PVT1-209ENST00000520913 ABCC10Q5T3U5 1492 aa18.31■□□□□ 0.52
PVT1-209ENST00000520913 PTPRGP23470 1445 aa18.31■□□□□ 0.52
PVT1-209ENST00000520913 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
PVT1-209ENST00000520913 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
PVT1-209ENST00000520913 ABCC2Q92887 1545 aa18.27■□□□□ 0.51
PVT1-209ENST00000520913 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
PVT1-209ENST00000520913 TSPOAP1O95153 1857 aa18.26■□□□□ 0.51
PVT1-209ENST00000520913 ZCCHC11Q5TAX3 1644 aaKnown RBP18.23■□□□□ 0.51
PVT1-209ENST00000520913 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
PVT1-209ENST00000520913 UACAQ9BZF9 1416 aa18.22■□□□□ 0.51
PVT1-209ENST00000520913 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
PVT1-209ENST00000520913 EEA1Q15075 1411 aa18.19■□□□□ 0.5
PVT1-209ENST00000520913 KDM5BQ9UGL1 1544 aa18.18■□□□□ 0.5
PVT1-209ENST00000520913 FAM69CQ0P6D2 419 aa18.17■□□□□ 0.5
PVT1-209ENST00000520913 PLB1Q6P1J6 1458 aa18.17■□□□□ 0.5
PVT1-209ENST00000520913 GLI2P10070 1586 aa18.17■□□□□ 0.5
PVT1-209ENST00000520913 KDM6BO15054 1643 aa18.16■□□□□ 0.5
PVT1-209ENST00000520913 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
PVT1-209ENST00000520913 PPRC1Q5VV67 1664 aaKnown RBP18.15■□□□□ 0.5
PVT1-209ENST00000520913 SAMD9Q5K651 1589 aa18.14■□□□□ 0.49
PVT1-209ENST00000520913 ABCA8O94911 1581 aa18.13■□□□□ 0.49
PVT1-209ENST00000520913 MAP3K4Q9Y6R4 1608 aa18.12■□□□□ 0.49
PVT1-209ENST00000520913 KIF21BO75037 1637 aa18.11■□□□□ 0.49
PVT1-209ENST00000520913 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
PVT1-209ENST00000520913 EPRSP07814 1512 aaKnown RBP18.07■□□□□ 0.48
PVT1-209ENST00000520913 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
PVT1-209ENST00000520913 WDR7Q9Y4E6 1490 aa18.05■□□□□ 0.48
PVT1-209ENST00000520913 RAPGEF6Q8TEU7 1601 aa18.03■□□□□ 0.48
PVT1-209ENST00000520913 TEX14Q8IWB6 1497 aa17.99■□□□□ 0.47
PVT1-209ENST00000520913 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
PVT1-209ENST00000520913 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
PVT1-209ENST00000520913 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
PVT1-209ENST00000520913 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
PVT1-209ENST00000520913 ABCA9Q8IUA7 1624 aa17.9■□□□□ 0.46
PVT1-209ENST00000520913 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
PVT1-209ENST00000520913 ATP10BO94823 1461 aa17.89■□□□□ 0.45
PVT1-209ENST00000520913 MAGI3Q5TCQ9 1506 aa17.89■□□□□ 0.45
PVT1-209ENST00000520913 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
PVT1-209ENST00000520913 NUP153P49790 1475 aaKnown RBP17.87■□□□□ 0.45
PVT1-209ENST00000520913 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
PVT1-209ENST00000520913 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
PVT1-209ENST00000520913 HECW1Q76N89 1606 aa17.81■□□□□ 0.44
PVT1-209ENST00000520913 RANGAP1P46060 587 aaPredicted RBP17.81■□□□□ 0.44
PVT1-209ENST00000520913 ARID3CA6NKF2 412 aa17.8■□□□□ 0.44
PVT1-209ENST00000520913 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
PVT1-209ENST00000520913 CFAP74Q9C0B2 1584 aa17.77■□□□□ 0.44
PVT1-209ENST00000520913 ARHGAP35Q9NRY4 1499 aa17.75■□□□□ 0.43
PVT1-209ENST00000520913 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
PVT1-209ENST00000520913 ARAP3Q8WWN8 1544 aa17.74■□□□□ 0.43
PVT1-209ENST00000520913 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
PVT1-209ENST00000520913 LRRIQ1Q96JM4 1722 aa17.74■□□□□ 0.43
PVT1-209ENST00000520913 CDK13Q14004 1512 aaKnown RBP17.73■□□□□ 0.43
PVT1-209ENST00000520913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
PVT1-209ENST00000520913 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
PVT1-209ENST00000520913 TTC37Q6PGP7 1564 aa17.73■□□□□ 0.43
PVT1-209ENST00000520913 ADGRL1O94910 1474 aa17.72■□□□□ 0.43
PVT1-209ENST00000520913 NEO1Q92859 1461 aa17.72■□□□□ 0.43
PVT1-209ENST00000520913 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
PVT1-209ENST00000520913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.7■□□□□ 0.42
PVT1-209ENST00000520913 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
PVT1-209ENST00000520913 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
PVT1-209ENST00000520913 FRMPD1Q5SYB0 1578 aa17.69■□□□□ 0.42
PVT1-209ENST00000520913 KDM4FA0A1W2PPD8 638 aa17.68■□□□□ 0.42
PVT1-209ENST00000520913 RICTORQ6R327 1708 aa17.68■□□□□ 0.42
PVT1-209ENST00000520913 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
PVT1-209ENST00000520913 KIF14Q15058 1648 aa17.65■□□□□ 0.42
PVT1-209ENST00000520913 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
PVT1-209ENST00000520913 FANCAO15360 1455 aa17.62■□□□□ 0.41
PVT1-209ENST00000520913 ARHGEF40Q8TER5 1519 aa17.61■□□□□ 0.41
PVT1-209ENST00000520913 CCDC18Q5T9S5 1454 aa17.58■□□□□ 0.41
PVT1-209ENST00000520913 ZMYM4Q5VZL5 1548 aa17.57■□□□□ 0.4
PVT1-209ENST00000520913 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
PVT1-209ENST00000520913 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
PVT1-209ENST00000520913 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
PVT1-209ENST00000520913 CLIP1P30622 1438 aa17.55■□□□□ 0.4
PVT1-209ENST00000520913 CASKIN1Q8WXD9 1431 aa17.55■□□□□ 0.4
PVT1-209ENST00000520913 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
PVT1-209ENST00000520913 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
PVT1-209ENST00000520913 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
PVT1-209ENST00000520913 PREX2Q70Z35 1606 aa17.54■□□□□ 0.4
PVT1-209ENST00000520913 CDC42BPBQ9Y5S2 1711 aa17.54■□□□□ 0.4
PVT1-209ENST00000520913 ADAMTSL3P82987 1691 aa17.54■□□□□ 0.4
PVT1-209ENST00000520913 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
PVT1-209ENST00000520913 PLCH2O75038 1416 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms