RNA–Protein interactions for RNA: ENST00000520740.5

KCNIP1-208, Transcript of potassium voltage-gated channel interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene KCNIP1, Length 1,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1-208ENST00000520740 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
KCNIP1-208ENST00000520740 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
KCNIP1-208ENST00000520740 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
KCNIP1-208ENST00000520740 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.47
KCNIP1-208ENST00000520740 PPP1R15AO75807 674 aaPredicted RBP17.95■□□□□ 0.46
KCNIP1-208ENST00000520740 CCDC136Q96JN2 1154 aa17.95■□□□□ 0.46
KCNIP1-208ENST00000520740 NBR1Q14596 966 aa17.95■□□□□ 0.46
KCNIP1-208ENST00000520740 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
KCNIP1-208ENST00000520740 TIMELESSQ9UNS1 1208 aa17.93■□□□□ 0.46
KCNIP1-208ENST00000520740 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
KCNIP1-208ENST00000520740 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
KCNIP1-208ENST00000520740 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
KCNIP1-208ENST00000520740 PKNOX2Q96KN3 472 aa17.91■□□□□ 0.46
KCNIP1-208ENST00000520740 IPO9Q96P70 1041 aaKnown RBP17.91■□□□□ 0.46
KCNIP1-208ENST00000520740 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
KCNIP1-208ENST00000520740 WASHC2CQ9Y4E1 1318 aa17.89■□□□□ 0.45
KCNIP1-208ENST00000520740 TRIM52Q96A61 297 aa17.88■□□□□ 0.45
KCNIP1-208ENST00000520740 MAPKBP1O60336 1514 aa17.87■□□□□ 0.45
KCNIP1-208ENST00000520740 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
KCNIP1-208ENST00000520740 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
KCNIP1-208ENST00000520740 GLIPR1L2Q4G1C9 344 aa17.84■□□□□ 0.45
KCNIP1-208ENST00000520740 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
KCNIP1-208ENST00000520740 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
KCNIP1-208ENST00000520740 WDR97A6NE52 1622 aa17.83■□□□□ 0.45
KCNIP1-208ENST00000520740 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.44
KCNIP1-208ENST00000520740 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
KCNIP1-208ENST00000520740 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
KCNIP1-208ENST00000520740 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
KCNIP1-208ENST00000520740 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
KCNIP1-208ENST00000520740 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
KCNIP1-208ENST00000520740 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
KCNIP1-208ENST00000520740 AMER1Q5JTC6 1135 aaPredicted RBP17.7■□□□□ 0.42
KCNIP1-208ENST00000520740 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
KCNIP1-208ENST00000520740 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
KCNIP1-208ENST00000520740 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
KCNIP1-208ENST00000520740 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
KCNIP1-208ENST00000520740 IRX6P78412 446 aaPredicted RBP17.66■□□□□ 0.42
KCNIP1-208ENST00000520740 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
KCNIP1-208ENST00000520740 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
KCNIP1-208ENST00000520740 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
KCNIP1-208ENST00000520740 SETD5Q9C0A6 1442 aa17.63■□□□□ 0.41
KCNIP1-208ENST00000520740 FAM43AQ8N2R8 423 aa17.63■□□□□ 0.41
KCNIP1-208ENST00000520740 NEFMP07197 916 aa17.62■□□□□ 0.41
KCNIP1-208ENST00000520740 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
KCNIP1-208ENST00000520740 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
KCNIP1-208ENST00000520740 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
KCNIP1-208ENST00000520740 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
KCNIP1-208ENST00000520740 MAP3K1Q13233 1512 aa17.58■□□□□ 0.41
KCNIP1-208ENST00000520740 RAPGEF2Q9Y4G8 1499 aa17.58■□□□□ 0.4
KCNIP1-208ENST00000520740 GSE1Q14687 1217 aa17.58■□□□□ 0.4
KCNIP1-208ENST00000520740 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
KCNIP1-208ENST00000520740 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.39
KCNIP1-208ENST00000520740 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
KCNIP1-208ENST00000520740 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
KCNIP1-208ENST00000520740 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
KCNIP1-208ENST00000520740 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
KCNIP1-208ENST00000520740 NESP48681 1621 aa17.49■□□□□ 0.39
KCNIP1-208ENST00000520740 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
KCNIP1-208ENST00000520740 PODXL2Q9NZ53 605 aa17.47■□□□□ 0.39
KCNIP1-208ENST00000520740 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
KCNIP1-208ENST00000520740 MS4A1P11836 297 aa17.45■□□□□ 0.38
KCNIP1-208ENST00000520740 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
KCNIP1-208ENST00000520740 CNTLNQ9NXG0 1405 aa17.44■□□□□ 0.38
KCNIP1-208ENST00000520740 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
KCNIP1-208ENST00000520740 ZMYND15Q9H091 742 aa17.42■□□□□ 0.38
KCNIP1-208ENST00000520740 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
KCNIP1-208ENST00000520740 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
KCNIP1-208ENST00000520740 RRP9O43818 475 aaKnown RBP17.4■□□□□ 0.38
KCNIP1-208ENST00000520740 KLHL34Q8N239 644 aa17.4■□□□□ 0.38
KCNIP1-208ENST00000520740 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
KCNIP1-208ENST00000520740 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
KCNIP1-208ENST00000520740 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
KCNIP1-208ENST00000520740 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
KCNIP1-208ENST00000520740 ABCA5Q8WWZ7 1642 aa17.38■□□□□ 0.37
KCNIP1-208ENST00000520740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
KCNIP1-208ENST00000520740 HOMEZQ8IX15 550 aa17.36■□□□□ 0.37
KCNIP1-208ENST00000520740 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
KCNIP1-208ENST00000520740 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
KCNIP1-208ENST00000520740 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
KCNIP1-208ENST00000520740 FRAT1Q92837 279 aaPredicted RBP17.34■□□□□ 0.37
KCNIP1-208ENST00000520740 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
KCNIP1-208ENST00000520740 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.36
KCNIP1-208ENST00000520740 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
KCNIP1-208ENST00000520740 BACH2Q9BYV9 841 aa17.33■□□□□ 0.36
KCNIP1-208ENST00000520740 CFAP43Q8NDM7 1665 aa17.33■□□□□ 0.36
KCNIP1-208ENST00000520740 PDE4AP27815 886 aa17.31■□□□□ 0.36
KCNIP1-208ENST00000520740 TULP1O00294 542 aaPredicted RBP17.31■□□□□ 0.36
KCNIP1-208ENST00000520740 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
KCNIP1-208ENST00000520740 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
KCNIP1-208ENST00000520740 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
KCNIP1-208ENST00000520740 AKNAQ7Z591 1439 aa17.28■□□□□ 0.36
KCNIP1-208ENST00000520740 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
KCNIP1-208ENST00000520740 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
KCNIP1-208ENST00000520740 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
KCNIP1-208ENST00000520740 KDM5BQ9UGL1 1544 aa17.26■□□□□ 0.35
KCNIP1-208ENST00000520740 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
KCNIP1-208ENST00000520740 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
KCNIP1-208ENST00000520740 LRRC9Q6ZRR7 1453 aa17.25■□□□□ 0.35
KCNIP1-208ENST00000520740 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
KCNIP1-208ENST00000520740 HSP90AA1P07900 732 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms