RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 ITGAEP38570 1179 aa20.41■□□□□ 0.86
PCDHA2-202ENST00000520672 PDS5BQ9NTI5 1447 aa20.4■□□□□ 0.86
PCDHA2-202ENST00000520672 URB2Q14146 1524 aaKnown RBP20.39■□□□□ 0.86
PCDHA2-202ENST00000520672 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
PCDHA2-202ENST00000520672 ARHGAP35Q9NRY4 1499 aa20.36■□□□□ 0.85
PCDHA2-202ENST00000520672 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
PCDHA2-202ENST00000520672 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
PCDHA2-202ENST00000520672 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
PCDHA2-202ENST00000520672 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
PCDHA2-202ENST00000520672 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
PCDHA2-202ENST00000520672 FHOD3Q2V2M9 1422 aa20.23■□□□□ 0.83
PCDHA2-202ENST00000520672 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
PCDHA2-202ENST00000520672 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.82
PCDHA2-202ENST00000520672 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
PCDHA2-202ENST00000520672 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
PCDHA2-202ENST00000520672 MIER1Q8N108 512 aa20.15■□□□□ 0.82
PCDHA2-202ENST00000520672 ANO8Q9HCE9 1232 aaPredicted RBP20.13■□□□□ 0.81
PCDHA2-202ENST00000520672 FBLN2P98095 1184 aa20.1■□□□□ 0.81
PCDHA2-202ENST00000520672 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
PCDHA2-202ENST00000520672 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.8
PCDHA2-202ENST00000520672 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
PCDHA2-202ENST00000520672 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
PCDHA2-202ENST00000520672 ZNF608Q9ULD9 1512 aaPredicted RBP20.04■□□□□ 0.8
PCDHA2-202ENST00000520672 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
PCDHA2-202ENST00000520672 CUL7Q14999 1698 aa20.01■□□□□ 0.79
PCDHA2-202ENST00000520672 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
PCDHA2-202ENST00000520672 PHLDB1Q86UU1 1377 aa19.99■□□□□ 0.79
PCDHA2-202ENST00000520672 PCF11O94913 1555 aaKnown RBP19.99■□□□□ 0.79
PCDHA2-202ENST00000520672 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
PCDHA2-202ENST00000520672 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
PCDHA2-202ENST00000520672 TIAM1Q13009 1591 aa19.97■□□□□ 0.79
PCDHA2-202ENST00000520672 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
PCDHA2-202ENST00000520672 RRBP1Q9P2E9 1410 aaKnown RBP19.94■□□□□ 0.78
PCDHA2-202ENST00000520672 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
PCDHA2-202ENST00000520672 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
PCDHA2-202ENST00000520672 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
PCDHA2-202ENST00000520672 FMN1Q68DA7 1419 aa19.89■□□□□ 0.77
PCDHA2-202ENST00000520672 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
PCDHA2-202ENST00000520672 CASKIN1Q8WXD9 1431 aa19.88■□□□□ 0.77
PCDHA2-202ENST00000520672 DHX57Q6P158 1386 aaKnown RBP19.87■□□□□ 0.77
PCDHA2-202ENST00000520672 BCANQ96GW7 911 aa19.87■□□□□ 0.77
PCDHA2-202ENST00000520672 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
PCDHA2-202ENST00000520672 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
PCDHA2-202ENST00000520672 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
PCDHA2-202ENST00000520672 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
PCDHA2-202ENST00000520672 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.77
PCDHA2-202ENST00000520672 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.77
PCDHA2-202ENST00000520672 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
PCDHA2-202ENST00000520672 SLC24A1O60721 1099 aa19.81■□□□□ 0.76
PCDHA2-202ENST00000520672 WDR62O43379 1518 aa19.79■□□□□ 0.76
PCDHA2-202ENST00000520672 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
PCDHA2-202ENST00000520672 MAP3K1Q13233 1512 aa19.77■□□□□ 0.76
PCDHA2-202ENST00000520672 SALL2Q9Y467 1007 aaPredicted RBP19.77■□□□□ 0.75
PCDHA2-202ENST00000520672 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
PCDHA2-202ENST00000520672 SIN3AQ96ST3 1273 aa19.74■□□□□ 0.75
PCDHA2-202ENST00000520672 IQGAP2Q13576 1575 aa19.74■□□□□ 0.75
PCDHA2-202ENST00000520672 SETD5Q9C0A6 1442 aa19.72■□□□□ 0.75
PCDHA2-202ENST00000520672 CFAP43Q8NDM7 1665 aa19.72■□□□□ 0.75
PCDHA2-202ENST00000520672 SAMD9Q5K651 1589 aa19.72■□□□□ 0.75
PCDHA2-202ENST00000520672 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
PCDHA2-202ENST00000520672 RBM19Q9Y4C8 960 aaKnown RBP19.71■□□□□ 0.75
PCDHA2-202ENST00000520672 RRP7BPQ9NSQ0 103 aa19.7■□□□□ 0.74
PCDHA2-202ENST00000520672 CDK13Q14004 1512 aaKnown RBP19.68■□□□□ 0.74
PCDHA2-202ENST00000520672 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
PCDHA2-202ENST00000520672 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
PCDHA2-202ENST00000520672 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
PCDHA2-202ENST00000520672 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
PCDHA2-202ENST00000520672 MSH5O43196 834 aa19.65■□□□□ 0.74
PCDHA2-202ENST00000520672 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.74
PCDHA2-202ENST00000520672 LRRIQ1Q96JM4 1722 aa19.63■□□□□ 0.73
PCDHA2-202ENST00000520672 KIAA0586Q9BVV6 1533 aa19.63■□□□□ 0.73
PCDHA2-202ENST00000520672 CLSPNQ9HAW4 1339 aa19.62■□□□□ 0.73
PCDHA2-202ENST00000520672 MAGI3Q5TCQ9 1506 aa19.61■□□□□ 0.73
PCDHA2-202ENST00000520672 PTPRKQ15262 1439 aa19.6■□□□□ 0.73
PCDHA2-202ENST00000520672 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
PCDHA2-202ENST00000520672 ZNF777Q9ULD5 760 aaPredicted RBP19.6■□□□□ 0.73
PCDHA2-202ENST00000520672 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
PCDHA2-202ENST00000520672 DEKP35659 375 aaKnown RBP19.59■□□□□ 0.73
PCDHA2-202ENST00000520672 TRIM52Q96A61 297 aa19.58■□□□□ 0.73
PCDHA2-202ENST00000520672 ZNF644Q9H582 1327 aaPredicted RBP19.57■□□□□ 0.72
PCDHA2-202ENST00000520672 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.57■□□□□ 0.72
PCDHA2-202ENST00000520672 DISP1Q96F81 1524 aa19.57■□□□□ 0.72
PCDHA2-202ENST00000520672 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
PCDHA2-202ENST00000520672 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
PCDHA2-202ENST00000520672 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
PCDHA2-202ENST00000520672 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
PCDHA2-202ENST00000520672 PLB1Q6P1J6 1458 aa19.53■□□□□ 0.72
PCDHA2-202ENST00000520672 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
PCDHA2-202ENST00000520672 HECW1Q76N89 1606 aa19.52■□□□□ 0.72
PCDHA2-202ENST00000520672 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
PCDHA2-202ENST00000520672 CEP170Q5SW79 1584 aa19.52■□□□□ 0.72
PCDHA2-202ENST00000520672 EHBP1L1Q8N3D4 1523 aa19.52■□□□□ 0.71
PCDHA2-202ENST00000520672 EIF5BO60841 1220 aaKnown RBP19.51■□□□□ 0.71
PCDHA2-202ENST00000520672 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
PCDHA2-202ENST00000520672 MAPKBP1O60336 1514 aa19.5■□□□□ 0.71
PCDHA2-202ENST00000520672 KIAA0556O60303 1618 aa19.5■□□□□ 0.71
PCDHA2-202ENST00000520672 UBE2Q2Q8WVN8 375 aa19.49■□□□□ 0.71
PCDHA2-202ENST00000520672 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
PCDHA2-202ENST00000520672 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
PCDHA2-202ENST00000520672 FKBP8Q14318 412 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms