RNA–Protein interactions for RNA: ENST00000519920.1

EFR3A-203, Transcript of EFR3 homolog A, humanhuman

TSL 5

Gene EFR3A, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-203ENST00000519920 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
EFR3A-203ENST00000519920 BAZ1BQ9UIG0 1483 aaKnown RBP10.25□□□□□ -0.77
EFR3A-203ENST00000519920 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
EFR3A-203ENST00000519920 PDS5BQ9NTI5 1447 aa10.24□□□□□ -0.77
EFR3A-203ENST00000519920 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
EFR3A-203ENST00000519920 LHX8Q68G74 356 aa10.22□□□□□ -0.77
EFR3A-203ENST00000519920 CADPSQ9ULU8 1353 aa10.19□□□□□ -0.78
EFR3A-203ENST00000519920 THOC2Q8NI27 1593 aaKnown RBP10.18□□□□□ -0.78
EFR3A-203ENST00000519920 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
EFR3A-203ENST00000519920 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
EFR3A-203ENST00000519920 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
EFR3A-203ENST00000519920 CLCN6P51797 869 aa10.14□□□□□ -0.79
EFR3A-203ENST00000519920 PEG3Q9GZU2 1588 aa10.14□□□□□ -0.79
EFR3A-203ENST00000519920 MROH2BQ7Z745 1585 aa10.12□□□□□ -0.79
EFR3A-203ENST00000519920 MRC2Q9UBG0 1479 aa10.11□□□□□ -0.79
EFR3A-203ENST00000519920 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
EFR3A-203ENST00000519920 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
EFR3A-203ENST00000519920 ZNF579Q8NAF0 562 aaKnown RBP10.1□□□□□ -0.79
EFR3A-203ENST00000519920 KIF21AQ7Z4S6 1674 aa10.07□□□□□ -0.8
EFR3A-203ENST00000519920 ZRANB1Q9UGI0 708 aa10.07□□□□□ -0.8
EFR3A-203ENST00000519920 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
EFR3A-203ENST00000519920 EHMT2Q96KQ7 1210 aa10.06□□□□□ -0.8
EFR3A-203ENST00000519920 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
EFR3A-203ENST00000519920 WDR62O43379 1518 aa10.05□□□□□ -0.8
EFR3A-203ENST00000519920 FANCD2Q9BXW9 1451 aa10.01□□□□□ -0.81
EFR3A-203ENST00000519920 CEP164Q9UPV0 1460 aa10.01□□□□□ -0.81
EFR3A-203ENST00000519920 GALR2O43603 387 aaPredicted RBP9.98□□□□□ -0.81
EFR3A-203ENST00000519920 CYB5RLQ6IPT4 315 aa9.97□□□□□ -0.81
EFR3A-203ENST00000519920 CFTRP13569 1480 aa9.97□□□□□ -0.81
EFR3A-203ENST00000519920 PAK3O75914 559 aaPredicted RBP9.95□□□□□ -0.82
EFR3A-203ENST00000519920 PHF12Q96QT6 1004 aa9.93□□□□□ -0.82
EFR3A-203ENST00000519920 WIZO95785 1651 aa9.93□□□□□ -0.82
EFR3A-203ENST00000519920 URB2Q14146 1524 aaKnown RBP9.92□□□□□ -0.82
EFR3A-203ENST00000519920 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
EFR3A-203ENST00000519920 NPM1P06748 294 aaKnown RBP eCLIP9.91□□□□□ -0.82
EFR3A-203ENST00000519920 RSF1Q96T23 1441 aaPredicted RBP9.89□□□□□ -0.83
EFR3A-203ENST00000519920 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
EFR3A-203ENST00000519920 RIMBP3CA6NJZ7 1639 aa9.86□□□□□ -0.83
EFR3A-203ENST00000519920 RIMBP3BA6NNM3 1639 aa9.86□□□□□ -0.83
EFR3A-203ENST00000519920 RIMBP3Q9UFD9 1639 aa9.86□□□□□ -0.83
EFR3A-203ENST00000519920 ARHGEF11O15085 1522 aa9.86□□□□□ -0.83
EFR3A-203ENST00000519920 IFT140Q96RY7 1462 aa9.85□□□□□ -0.83
EFR3A-203ENST00000519920 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
EFR3A-203ENST00000519920 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
EFR3A-203ENST00000519920 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.84
EFR3A-203ENST00000519920 PROM2Q8N271 834 aa9.8□□□□□ -0.84
EFR3A-203ENST00000519920 TOP2AP11388 1531 aaKnown RBP9.8□□□□□ -0.84
EFR3A-203ENST00000519920 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
EFR3A-203ENST00000519920 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
EFR3A-203ENST00000519920 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
EFR3A-203ENST00000519920 TOPBP1Q92547 1522 aa9.77□□□□□ -0.84
EFR3A-203ENST00000519920 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
EFR3A-203ENST00000519920 ARAP1Q96P48 1450 aa9.76□□□□□ -0.85
EFR3A-203ENST00000519920 ABCC8Q09428 1581 aa9.75□□□□□ -0.85
EFR3A-203ENST00000519920 CHMP7Q8WUX9 453 aaPredicted RBP9.74□□□□□ -0.85
EFR3A-203ENST00000519920 ATMINO43313 823 aaPredicted RBP9.73□□□□□ -0.85
EFR3A-203ENST00000519920 TSPYL2Q9H2G4 693 aaPredicted RBP9.73□□□□□ -0.85
EFR3A-203ENST00000519920 METRNQ9UJH8 293 aa9.73□□□□□ -0.85
EFR3A-203ENST00000519920 TDRD9Q8NDG6 1382 aaKnown RBP9.73□□□□□ -0.85
EFR3A-203ENST00000519920 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
EFR3A-203ENST00000519920 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.86
EFR3A-203ENST00000519920 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
EFR3A-203ENST00000519920 SOGA1O94964 1423 aa9.7□□□□□ -0.86
EFR3A-203ENST00000519920 C7P10643 843 aa9.69□□□□□ -0.86
EFR3A-203ENST00000519920 RAD54L2Q9Y4B4 1467 aa9.68□□□□□ -0.86
EFR3A-203ENST00000519920 EIF4G3O43432 1585 aaKnown RBP9.67□□□□□ -0.86
EFR3A-203ENST00000519920 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
EFR3A-203ENST00000519920 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
EFR3A-203ENST00000519920 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
EFR3A-203ENST00000519920 KIF12Q96FN5 646 aa9.65□□□□□ -0.86
EFR3A-203ENST00000519920 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
EFR3A-203ENST00000519920 POTEMA6NI47 508 aa9.64□□□□□ -0.87
EFR3A-203ENST00000519920 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
EFR3A-203ENST00000519920 PLEKHG5O94827 1062 aa9.62□□□□□ -0.87
EFR3A-203ENST00000519920 SNAPC4Q5SXM2 1469 aa9.61□□□□□ -0.87
EFR3A-203ENST00000519920 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
EFR3A-203ENST00000519920 CHD1O14646 1710 aa9.61□□□□□ -0.87
EFR3A-203ENST00000519920 POTEGQ6S5H5 508 aa9.6□□□□□ -0.87
EFR3A-203ENST00000519920 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
EFR3A-203ENST00000519920 MIER1Q8N108 512 aa9.6□□□□□ -0.87
EFR3A-203ENST00000519920 BMP2KQ9NSY1 1161 aaPredicted RBP9.6□□□□□ -0.87
EFR3A-203ENST00000519920 TRPC6Q9Y210 931 aa9.59□□□□□ -0.87
EFR3A-203ENST00000519920 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
EFR3A-203ENST00000519920 CLASP1Q7Z460 1538 aa9.58□□□□□ -0.88
EFR3A-203ENST00000519920 MAP3K13O43283 966 aa9.58□□□□□ -0.88
EFR3A-203ENST00000519920 PRDM2Q13029 1718 aa9.58□□□□□ -0.88
EFR3A-203ENST00000519920 GAPVD1Q14C86 1478 aa9.58□□□□□ -0.88
EFR3A-203ENST00000519920 MAGI1Q96QZ7 1491 aaPredicted RBP9.57□□□□□ -0.88
EFR3A-203ENST00000519920 SYNJ2O15056 1496 aa9.56□□□□□ -0.88
EFR3A-203ENST00000519920 FGD5Q6ZNL6 1462 aa9.56□□□□□ -0.88
EFR3A-203ENST00000519920 TIE1P35590 1138 aa9.56□□□□□ -0.88
EFR3A-203ENST00000519920 SYNJ1O43426 1573 aa9.55□□□□□ -0.88
EFR3A-203ENST00000519920 POTEFA5A3E0 1075 aa9.55□□□□□ -0.88
EFR3A-203ENST00000519920 SCUBE2Q9NQ36 999 aa9.55□□□□□ -0.88
EFR3A-203ENST00000519920 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
EFR3A-203ENST00000519920 CUX1P39880 1505 aa9.51□□□□□ -0.89
EFR3A-203ENST00000519920 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
EFR3A-203ENST00000519920 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
EFR3A-203ENST00000519920 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
EFR3A-203ENST00000519920 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms