RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
IGKV3D-25-201ENST00000519599 ADCY10Q96PN6 1610 aa10.82□□□□□ -0.68
IGKV3D-25-201ENST00000519599 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
IGKV3D-25-201ENST00000519599 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
IGKV3D-25-201ENST00000519599 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
IGKV3D-25-201ENST00000519599 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.68
IGKV3D-25-201ENST00000519599 IQGAP2Q13576 1575 aa10.76□□□□□ -0.69
IGKV3D-25-201ENST00000519599 CTTNBP2Q8WZ74 1663 aa10.75□□□□□ -0.69
IGKV3D-25-201ENST00000519599 MAPKBP1O60336 1514 aa10.74□□□□□ -0.69
IGKV3D-25-201ENST00000519599 DISP1Q96F81 1524 aa10.74□□□□□ -0.69
IGKV3D-25-201ENST00000519599 DIP2BQ9P265 1576 aa10.73□□□□□ -0.69
IGKV3D-25-201ENST00000519599 UGGT2Q9NYU1 1516 aa10.72□□□□□ -0.69
IGKV3D-25-201ENST00000519599 RAPGEF2Q9Y4G8 1499 aa10.71□□□□□ -0.69
IGKV3D-25-201ENST00000519599 KIAA0556O60303 1618 aa10.7□□□□□ -0.7
IGKV3D-25-201ENST00000519599 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
IGKV3D-25-201ENST00000519599 PPRC1Q5VV67 1664 aaKnown RBP10.69□□□□□ -0.7
IGKV3D-25-201ENST00000519599 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
IGKV3D-25-201ENST00000519599 TSPOAP1O95153 1857 aa10.67□□□□□ -0.7
IGKV3D-25-201ENST00000519599 UHRF1BP1LA0JNW5 1464 aa10.66□□□□□ -0.7
IGKV3D-25-201ENST00000519599 ABCC2Q92887 1545 aa10.65□□□□□ -0.7
IGKV3D-25-201ENST00000519599 PTPRGP23470 1445 aa10.65□□□□□ -0.7
IGKV3D-25-201ENST00000519599 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.71
IGKV3D-25-201ENST00000519599 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
IGKV3D-25-201ENST00000519599 CARMIL2Q6F5E8 1435 aa10.62□□□□□ -0.71
IGKV3D-25-201ENST00000519599 KDM5BQ9UGL1 1544 aa10.62□□□□□ -0.71
IGKV3D-25-201ENST00000519599 GLI2P10070 1586 aa10.61□□□□□ -0.71
IGKV3D-25-201ENST00000519599 ABCA8O94911 1581 aa10.6□□□□□ -0.71
IGKV3D-25-201ENST00000519599 UACAQ9BZF9 1416 aa10.6□□□□□ -0.71
IGKV3D-25-201ENST00000519599 MAP3K4Q9Y6R4 1608 aa10.6□□□□□ -0.71
IGKV3D-25-201ENST00000519599 SAMD9Q5K651 1589 aa10.59□□□□□ -0.71
IGKV3D-25-201ENST00000519599 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
IGKV3D-25-201ENST00000519599 PLB1Q6P1J6 1458 aa10.57□□□□□ -0.72
IGKV3D-25-201ENST00000519599 FAM69CQ0P6D2 419 aa10.57□□□□□ -0.72
IGKV3D-25-201ENST00000519599 KDM6BO15054 1643 aa10.56□□□□□ -0.72
IGKV3D-25-201ENST00000519599 EPRSP07814 1512 aaKnown RBP10.54□□□□□ -0.72
IGKV3D-25-201ENST00000519599 TTBK1Q5TCY1 1321 aaPredicted RBP10.54□□□□□ -0.72
IGKV3D-25-201ENST00000519599 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
IGKV3D-25-201ENST00000519599 GOLGA3Q08378 1498 aa10.53□□□□□ -0.72
IGKV3D-25-201ENST00000519599 KIF21BO75037 1637 aa10.52□□□□□ -0.73
IGKV3D-25-201ENST00000519599 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.73
IGKV3D-25-201ENST00000519599 CFAP43Q8NDM7 1665 aa10.5□□□□□ -0.73
IGKV3D-25-201ENST00000519599 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
IGKV3D-25-201ENST00000519599 CSRNP3Q8WYN3 585 aa10.5□□□□□ -0.73
IGKV3D-25-201ENST00000519599 EEA1Q15075 1411 aa10.5□□□□□ -0.73
IGKV3D-25-201ENST00000519599 RAPGEF6Q8TEU7 1601 aa10.48□□□□□ -0.73
IGKV3D-25-201ENST00000519599 ATP10BO94823 1461 aa10.47□□□□□ -0.73
IGKV3D-25-201ENST00000519599 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
IGKV3D-25-201ENST00000519599 MAGI3Q5TCQ9 1506 aa10.44□□□□□ -0.74
IGKV3D-25-201ENST00000519599 NUP153P49790 1475 aaKnown RBP10.44□□□□□ -0.74
IGKV3D-25-201ENST00000519599 CHIC1Q5VXU3 224 aa10.43□□□□□ -0.74
IGKV3D-25-201ENST00000519599 LRRIQ1Q96JM4 1722 aa10.43□□□□□ -0.74
IGKV3D-25-201ENST00000519599 FHOD3Q2V2M9 1422 aa10.42□□□□□ -0.74
IGKV3D-25-201ENST00000519599 P3H3Q8IVL6 736 aa10.42□□□□□ -0.74
IGKV3D-25-201ENST00000519599 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
IGKV3D-25-201ENST00000519599 EFCAB5A4FU69 1503 aa10.41□□□□□ -0.74
IGKV3D-25-201ENST00000519599 TEX14Q8IWB6 1497 aa10.4□□□□□ -0.74
IGKV3D-25-201ENST00000519599 FAM9AQ8IZU1 332 aaPredicted RBP10.39□□□□□ -0.75
IGKV3D-25-201ENST00000519599 CD109Q6YHK3 1445 aa10.38□□□□□ -0.75
IGKV3D-25-201ENST00000519599 FRMPD1Q5SYB0 1578 aa10.38□□□□□ -0.75
IGKV3D-25-201ENST00000519599 ARHGAP35Q9NRY4 1499 aa10.37□□□□□ -0.75
IGKV3D-25-201ENST00000519599 ARAP3Q8WWN8 1544 aa10.36□□□□□ -0.75
IGKV3D-25-201ENST00000519599 TTC37Q6PGP7 1564 aa10.35□□□□□ -0.75
IGKV3D-25-201ENST00000519599 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
IGKV3D-25-201ENST00000519599 RICTORQ6R327 1708 aa10.35□□□□□ -0.75
IGKV3D-25-201ENST00000519599 ADGRL1O94910 1474 aa10.35□□□□□ -0.75
IGKV3D-25-201ENST00000519599 CDK13Q14004 1512 aaKnown RBP10.34□□□□□ -0.75
IGKV3D-25-201ENST00000519599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
IGKV3D-25-201ENST00000519599 AEBP2Q6ZN18 517 aaPredicted RBP10.33□□□□□ -0.76
IGKV3D-25-201ENST00000519599 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
IGKV3D-25-201ENST00000519599 SIGLEC1Q9BZZ2 1709 aa10.33□□□□□ -0.76
IGKV3D-25-201ENST00000519599 KIF14Q15058 1648 aa10.3□□□□□ -0.76
IGKV3D-25-201ENST00000519599 HECW1Q76N89 1606 aa10.3□□□□□ -0.76
IGKV3D-25-201ENST00000519599 RANGAP1P46060 587 aaPredicted RBP10.3□□□□□ -0.76
IGKV3D-25-201ENST00000519599 NEO1Q92859 1461 aa10.3□□□□□ -0.76
IGKV3D-25-201ENST00000519599 ADAMTSL3P82987 1691 aa10.28□□□□□ -0.76
IGKV3D-25-201ENST00000519599 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.76
IGKV3D-25-201ENST00000519599 PCF11O94913 1555 aaKnown RBP10.27□□□□□ -0.76
IGKV3D-25-201ENST00000519599 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.77
IGKV3D-25-201ENST00000519599 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
IGKV3D-25-201ENST00000519599 CFAP74Q9C0B2 1584 aa10.26□□□□□ -0.77
IGKV3D-25-201ENST00000519599 BCORL1Q5H9F3 1711 aa10.25□□□□□ -0.77
IGKV3D-25-201ENST00000519599 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
IGKV3D-25-201ENST00000519599 ARHGEF40Q8TER5 1519 aa10.25□□□□□ -0.77
IGKV3D-25-201ENST00000519599 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
IGKV3D-25-201ENST00000519599 PHLDB1Q86UU1 1377 aa10.24□□□□□ -0.77
IGKV3D-25-201ENST00000519599 RAPGEF3O95398 923 aa10.23□□□□□ -0.77
IGKV3D-25-201ENST00000519599 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
IGKV3D-25-201ENST00000519599 CDC42BPAQ5VT25 1732 aa10.23□□□□□ -0.77
IGKV3D-25-201ENST00000519599 AKNAQ7Z591 1439 aa10.23□□□□□ -0.77
IGKV3D-25-201ENST00000519599 FANCAO15360 1455 aa10.23□□□□□ -0.77
IGKV3D-25-201ENST00000519599 PLCH2O75038 1416 aa10.21□□□□□ -0.78
IGKV3D-25-201ENST00000519599 HECW2Q9P2P5 1572 aa10.21□□□□□ -0.78
IGKV3D-25-201ENST00000519599 PREX2Q70Z35 1606 aa10.21□□□□□ -0.78
IGKV3D-25-201ENST00000519599 MADDQ8WXG6 1647 aa10.21□□□□□ -0.78
IGKV3D-25-201ENST00000519599 PLEKHD1A6NEE1 506 aa10.2□□□□□ -0.78
IGKV3D-25-201ENST00000519599 TROQ12816 1431 aaPredicted RBP10.2□□□□□ -0.78
IGKV3D-25-201ENST00000519599 CASKIN1Q8WXD9 1431 aa10.2□□□□□ -0.78
IGKV3D-25-201ENST00000519599 DENND4BO75064 1496 aaPredicted RBP10.19□□□□□ -0.78
IGKV3D-25-201ENST00000519599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.19□□□□□ -0.78
IGKV3D-25-201ENST00000519599 HNRNPUL2Q1KMD3 747 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms