RNA–Protein interactions for RNA: ENST00000519531.5

ARFGAP1-211, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 3

Gene ARFGAP1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-211ENST00000519531 JPH4Q96JJ6 628 aa29.69■■■□□ 2.34
ARFGAP1-211ENST00000519531 ARHGEF11O15085 1522 aa29.69■■■□□ 2.34
ARFGAP1-211ENST00000519531 KIF21BO75037 1637 aa29.68■■■□□ 2.34
ARFGAP1-211ENST00000519531 RIMBP3CA6NJZ7 1639 aa29.65■■■□□ 2.34
ARFGAP1-211ENST00000519531 RIMBP3BA6NNM3 1639 aa29.65■■■□□ 2.34
ARFGAP1-211ENST00000519531 RIMBP3Q9UFD9 1639 aa29.65■■■□□ 2.34
ARFGAP1-211ENST00000519531 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
ARFGAP1-211ENST00000519531 IQGAP2Q13576 1575 aa29.62■■■□□ 2.33
ARFGAP1-211ENST00000519531 PRG4Q92954 1404 aaPredicted RBP29.6■■■□□ 2.33
ARFGAP1-211ENST00000519531 CTTNBP2Q8WZ74 1663 aa29.58■■■□□ 2.33
ARFGAP1-211ENST00000519531 GOLGA3Q08378 1498 aa29.57■■■□□ 2.32
ARFGAP1-211ENST00000519531 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
ARFGAP1-211ENST00000519531 UBTFP17480 764 aaKnown RBP29.55■■■□□ 2.32
ARFGAP1-211ENST00000519531 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
ARFGAP1-211ENST00000519531 CYB5RLQ6IPT4 315 aa29.48■■■□□ 2.31
ARFGAP1-211ENST00000519531 UGGT2Q9NYU1 1516 aa29.46■■■□□ 2.31
ARFGAP1-211ENST00000519531 CARMIL2Q6F5E8 1435 aa29.43■■■□□ 2.3
ARFGAP1-211ENST00000519531 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
ARFGAP1-211ENST00000519531 DISP1Q96F81 1524 aa29.4■■■□□ 2.3
ARFGAP1-211ENST00000519531 TTBK1Q5TCY1 1321 aaPredicted RBP29.36■■■□□ 2.29
ARFGAP1-211ENST00000519531 KIAA0556O60303 1618 aa29.33■■■□□ 2.29
ARFGAP1-211ENST00000519531 TNIKQ9UKE5 1360 aa29.32■■■□□ 2.28
ARFGAP1-211ENST00000519531 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
ARFGAP1-211ENST00000519531 P3H3Q8IVL6 736 aa29.3■■■□□ 2.28
ARFGAP1-211ENST00000519531 PTPRGP23470 1445 aa29.29■■■□□ 2.28
ARFGAP1-211ENST00000519531 SAMD9Q5K651 1589 aa29.23■■■□□ 2.27
ARFGAP1-211ENST00000519531 EFCAB5A4FU69 1503 aa29.17■■■□□ 2.26
ARFGAP1-211ENST00000519531 FHOD3Q2V2M9 1422 aa29.15■■■□□ 2.26
ARFGAP1-211ENST00000519531 ARHGAP35Q9NRY4 1499 aa29.12■■■□□ 2.25
ARFGAP1-211ENST00000519531 UACAQ9BZF9 1416 aa29.09■■■□□ 2.25
ARFGAP1-211ENST00000519531 CLIP1P30622 1438 aa29.07■■■□□ 2.24
ARFGAP1-211ENST00000519531 ADCY10Q96PN6 1610 aa29.06■■■□□ 2.24
ARFGAP1-211ENST00000519531 PLB1Q6P1J6 1458 aa29.06■■■□□ 2.24
ARFGAP1-211ENST00000519531 CEP162Q5TB80 1403 aa29.03■■■□□ 2.24
ARFGAP1-211ENST00000519531 ABCC2Q92887 1545 aa29■■■□□ 2.23
ARFGAP1-211ENST00000519531 NPM1P06748 294 aaKnown RBP eCLIP29■■■□□ 2.23
ARFGAP1-211ENST00000519531 UHRF1BP1LA0JNW5 1464 aa29■■■□□ 2.23
ARFGAP1-211ENST00000519531 ABCA8O94911 1581 aa28.99■■■□□ 2.23
ARFGAP1-211ENST00000519531 FMN1Q68DA7 1419 aa28.93■■■□□ 2.22
ARFGAP1-211ENST00000519531 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
ARFGAP1-211ENST00000519531 ARID3CA6NKF2 412 aa28.9■■■□□ 2.22
ARFGAP1-211ENST00000519531 KDM5BQ9UGL1 1544 aa28.87■■■□□ 2.21
ARFGAP1-211ENST00000519531 ATP1B4Q9UN42 357 aaPredicted RBP28.85■■■□□ 2.21
ARFGAP1-211ENST00000519531 NUP153P49790 1475 aaKnown RBP28.82■■■□□ 2.2
ARFGAP1-211ENST00000519531 ZCCHC11Q5TAX3 1644 aaKnown RBP28.82■■■□□ 2.2
ARFGAP1-211ENST00000519531 ATP10BO94823 1461 aa28.79■■■□□ 2.2
ARFGAP1-211ENST00000519531 MAPKBP1O60336 1514 aa28.79■■■□□ 2.2
ARFGAP1-211ENST00000519531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.78■■■□□ 2.2
ARFGAP1-211ENST00000519531 TRHP20396 242 aaPredicted RBP28.78■■■□□ 2.2
ARFGAP1-211ENST00000519531 HNRNPUL2Q1KMD3 747 aaKnown RBP28.78■■■□□ 2.2
ARFGAP1-211ENST00000519531 ASXL2Q76L83 1435 aa28.76■■■□□ 2.19
ARFGAP1-211ENST00000519531 CASKIN1Q8WXD9 1431 aa28.74■■■□□ 2.19
ARFGAP1-211ENST00000519531 PCF11O94913 1555 aaKnown RBP28.73■■■□□ 2.19
ARFGAP1-211ENST00000519531 HECW1Q76N89 1606 aa28.73■■■□□ 2.19
ARFGAP1-211ENST00000519531 FYCO1Q9BQS8 1478 aa28.68■■■□□ 2.18
ARFGAP1-211ENST00000519531 EPRSP07814 1512 aaKnown RBP28.68■■■□□ 2.18
ARFGAP1-211ENST00000519531 CDK13Q14004 1512 aaKnown RBP28.68■■■□□ 2.18
ARFGAP1-211ENST00000519531 ABCC10Q5T3U5 1492 aa28.65■■■□□ 2.18
ARFGAP1-211ENST00000519531 WDR7Q9Y4E6 1490 aa28.65■■■□□ 2.18
ARFGAP1-211ENST00000519531 FAM69CQ0P6D2 419 aa28.64■■■□□ 2.17
ARFGAP1-211ENST00000519531 VPS8Q8N3P4 1428 aa28.63■■■□□ 2.17
ARFGAP1-211ENST00000519531 KCNH8Q96L42 1107 aa28.62■■■□□ 2.17
ARFGAP1-211ENST00000519531 PLEKHD1A6NEE1 506 aa28.6■■■□□ 2.17
ARFGAP1-211ENST00000519531 LRRIQ1Q96JM4 1722 aa28.6■■■□□ 2.17
ARFGAP1-211ENST00000519531 DIP2BQ9P265 1576 aa28.59■■■□□ 2.17
ARFGAP1-211ENST00000519531 CCDC18Q5T9S5 1454 aa28.57■■■□□ 2.16
ARFGAP1-211ENST00000519531 KIF13AQ9H1H9 1805 aa28.55■■■□□ 2.16
ARFGAP1-211ENST00000519531 CDK11AQ9UQ88 783 aaPredicted RBP28.55■■■□□ 2.16
ARFGAP1-211ENST00000519531 GLI2P10070 1586 aa28.48■■■□□ 2.15
ARFGAP1-211ENST00000519531 TROQ12816 1431 aaPredicted RBP28.43■■■□□ 2.14
ARFGAP1-211ENST00000519531 MAGI3Q5TCQ9 1506 aa28.41■■■□□ 2.14
ARFGAP1-211ENST00000519531 TSPOAP1O95153 1857 aa28.38■■■□□ 2.13
ARFGAP1-211ENST00000519531 CD109Q6YHK3 1445 aa28.38■■■□□ 2.13
ARFGAP1-211ENST00000519531 MAP3K4Q9Y6R4 1608 aa28.37■■■□□ 2.13
ARFGAP1-211ENST00000519531 MTUS2Q5JR59 1369 aa28.37■■■□□ 2.13
ARFGAP1-211ENST00000519531 APLP2Q06481 763 aa28.36■■■□□ 2.13
ARFGAP1-211ENST00000519531 TIAM1Q13009 1591 aa28.35■■■□□ 2.13
ARFGAP1-211ENST00000519531 ABCA9Q8IUA7 1624 aa28.35■■■□□ 2.13
ARFGAP1-211ENST00000519531 CFAP43Q8NDM7 1665 aa28.34■■■□□ 2.13
ARFGAP1-211ENST00000519531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.34■■■□□ 2.131e-6■□□□□ 10.3
ARFGAP1-211ENST00000519531 KIF14Q15058 1648 aa28.33■■■□□ 2.13
ARFGAP1-211ENST00000519531 TTC37Q6PGP7 1564 aa28.3■■■□□ 2.12
ARFGAP1-211ENST00000519531 MAP3K1Q13233 1512 aa28.29■■■□□ 2.12
ARFGAP1-211ENST00000519531 KANK4Q5T7N3 995 aaPredicted RBP28.27■■■□□ 2.12
ARFGAP1-211ENST00000519531 PPRC1Q5VV67 1664 aaKnown RBP28.27■■■□□ 2.12
ARFGAP1-211ENST00000519531 EHBP1L1Q8N3D4 1523 aa28.26■■■□□ 2.12
ARFGAP1-211ENST00000519531 LRRC9Q6ZRR7 1453 aa28.25■■■□□ 2.11
ARFGAP1-211ENST00000519531 TEX14Q8IWB6 1497 aa28.24■■■□□ 2.11
ARFGAP1-211ENST00000519531 PLCH2O75038 1416 aa28.18■■■□□ 2.1
ARFGAP1-211ENST00000519531 MYO5CQ9NQX4 1742 aa28.15■■■□□ 2.1
ARFGAP1-211ENST00000519531 SUPT6HQ7KZ85 1726 aaKnown RBP28.14■■■□□ 2.09
ARFGAP1-211ENST00000519531 CCNB3Q8WWL7 1395 aa28.13■■■□□ 2.09
ARFGAP1-211ENST00000519531 NCOA2Q15596 1464 aa28.13■■■□□ 2.09
ARFGAP1-211ENST00000519531 FANCAO15360 1455 aa28.12■■■□□ 2.09
ARFGAP1-211ENST00000519531 EFCAB2Q5VUJ9 269 aa28.11■■■□□ 2.09
ARFGAP1-211ENST00000519531 ARHGAP5Q13017 1502 aa28.1■■■□□ 2.09
ARFGAP1-211ENST00000519531 GPATCH8Q9UKJ3 1502 aaKnown RBP28.1■■■□□ 2.09
ARFGAP1-211ENST00000519531 NEO1Q92859 1461 aa28.09■■■□□ 2.09
ARFGAP1-211ENST00000519531 ARAP3Q8WWN8 1544 aa28.08■■■□□ 2.09
ARFGAP1-211ENST00000519531 CDC42BPAQ5VT25 1732 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms