RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
SPIDR-209ENST00000519141 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
SPIDR-209ENST00000519141 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
SPIDR-209ENST00000519141 RIMBP3CA6NJZ7 1639 aa19.55■□□□□ 0.72
SPIDR-209ENST00000519141 RIMBP3BA6NNM3 1639 aa19.55■□□□□ 0.72
SPIDR-209ENST00000519141 RIMBP3Q9UFD9 1639 aa19.55■□□□□ 0.72
SPIDR-209ENST00000519141 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
SPIDR-209ENST00000519141 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
SPIDR-209ENST00000519141 VPS8Q8N3P4 1428 aa19.49■□□□□ 0.71
SPIDR-209ENST00000519141 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
SPIDR-209ENST00000519141 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
SPIDR-209ENST00000519141 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
SPIDR-209ENST00000519141 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
SPIDR-209ENST00000519141 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
SPIDR-209ENST00000519141 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
SPIDR-209ENST00000519141 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
SPIDR-209ENST00000519141 SAMD9Q5K651 1589 aa19.39■□□□□ 0.69
SPIDR-209ENST00000519141 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
SPIDR-209ENST00000519141 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
SPIDR-209ENST00000519141 NUP160Q12769 1436 aa19.33■□□□□ 0.68
SPIDR-209ENST00000519141 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
SPIDR-209ENST00000519141 UGGT2Q9NYU1 1516 aa19.32■□□□□ 0.68
SPIDR-209ENST00000519141 P3H3Q8IVL6 736 aa19.29■□□□□ 0.68
SPIDR-209ENST00000519141 APLP2Q06481 763 aa19.28■□□□□ 0.68
SPIDR-209ENST00000519141 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.68
SPIDR-209ENST00000519141 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
SPIDR-209ENST00000519141 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
SPIDR-209ENST00000519141 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
SPIDR-209ENST00000519141 KIAA0556O60303 1618 aa19.23■□□□□ 0.67
SPIDR-209ENST00000519141 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
SPIDR-209ENST00000519141 PCGF6Q9BYE7 350 aa19.2■□□□□ 0.66
SPIDR-209ENST00000519141 DISP1Q96F81 1524 aa19.2■□□□□ 0.66
SPIDR-209ENST00000519141 CASKIN1Q8WXD9 1431 aa19.19■□□□□ 0.66
SPIDR-209ENST00000519141 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
SPIDR-209ENST00000519141 MAP3K1Q13233 1512 aa19.18■□□□□ 0.66
SPIDR-209ENST00000519141 CFAP43Q8NDM7 1665 aa19.17■□□□□ 0.66
SPIDR-209ENST00000519141 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
SPIDR-209ENST00000519141 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
SPIDR-209ENST00000519141 TTBK1Q5TCY1 1321 aaPredicted RBP19.17■□□□□ 0.66
SPIDR-209ENST00000519141 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
SPIDR-209ENST00000519141 JPH4Q96JJ6 628 aa19.14■□□□□ 0.65
SPIDR-209ENST00000519141 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
SPIDR-209ENST00000519141 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-209ENST00000519141 PRG4Q92954 1404 aaPredicted RBP19.09■□□□□ 0.65
SPIDR-209ENST00000519141 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.64
SPIDR-209ENST00000519141 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
SPIDR-209ENST00000519141 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-209ENST00000519141 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
SPIDR-209ENST00000519141 CCDC18Q5T9S5 1454 aa19.04■□□□□ 0.64
SPIDR-209ENST00000519141 RAPGEF6Q8TEU7 1601 aa19.03■□□□□ 0.64
SPIDR-209ENST00000519141 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
SPIDR-209ENST00000519141 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
SPIDR-209ENST00000519141 EHBP1L1Q8N3D4 1523 aa18.95■□□□□ 0.62
SPIDR-209ENST00000519141 CDK13Q14004 1512 aaKnown RBP18.95■□□□□ 0.62
SPIDR-209ENST00000519141 PLB1Q6P1J6 1458 aa18.94■□□□□ 0.62
SPIDR-209ENST00000519141 MTUS2Q5JR59 1369 aa18.94■□□□□ 0.62
SPIDR-209ENST00000519141 ABCA8O94911 1581 aa18.94■□□□□ 0.62
SPIDR-209ENST00000519141 PTPRGP23470 1445 aa18.92■□□□□ 0.62
SPIDR-209ENST00000519141 SUPT6HQ7KZ85 1726 aaKnown RBP18.9■□□□□ 0.62
SPIDR-209ENST00000519141 MAGI3Q5TCQ9 1506 aa18.88■□□□□ 0.61
SPIDR-209ENST00000519141 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
SPIDR-209ENST00000519141 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
SPIDR-209ENST00000519141 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
SPIDR-209ENST00000519141 NCOA2Q15596 1464 aa18.83■□□□□ 0.61
SPIDR-209ENST00000519141 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.6
SPIDR-209ENST00000519141 UACAQ9BZF9 1416 aa18.82■□□□□ 0.6
SPIDR-209ENST00000519141 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
SPIDR-209ENST00000519141 CDK11AQ9UQ88 783 aaPredicted RBP18.82■□□□□ 0.6
SPIDR-209ENST00000519141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
SPIDR-209ENST00000519141 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
SPIDR-209ENST00000519141 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPIDR-209ENST00000519141 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
SPIDR-209ENST00000519141 ATP10BO94823 1461 aa18.77■□□□□ 0.6
SPIDR-209ENST00000519141 TROQ12816 1431 aaPredicted RBP18.76■□□□□ 0.59
SPIDR-209ENST00000519141 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
SPIDR-209ENST00000519141 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
SPIDR-209ENST00000519141 MAPKBP1O60336 1514 aa18.75■□□□□ 0.59
SPIDR-209ENST00000519141 UHRF1BP1LA0JNW5 1464 aa18.74■□□□□ 0.59
SPIDR-209ENST00000519141 KIF13AQ9H1H9 1805 aa18.74■□□□□ 0.59
SPIDR-209ENST00000519141 ABCC10Q5T3U5 1492 aa18.71■□□□□ 0.59
SPIDR-209ENST00000519141 KIF14Q15058 1648 aa18.7■□□□□ 0.58
SPIDR-209ENST00000519141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.7■□□□□ 0.58
SPIDR-209ENST00000519141 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
SPIDR-209ENST00000519141 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
SPIDR-209ENST00000519141 FAM50AQ14320 339 aaKnown RBP18.69■□□□□ 0.58
SPIDR-209ENST00000519141 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
SPIDR-209ENST00000519141 PTPN23Q9H3S7 1636 aa18.68■□□□□ 0.58
SPIDR-209ENST00000519141 ITSN2Q9NZM3 1697 aa18.67■□□□□ 0.58
SPIDR-209ENST00000519141 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
SPIDR-209ENST00000519141 MIA2Q96PC5 1412 aa18.65■□□□□ 0.58
SPIDR-209ENST00000519141 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
SPIDR-209ENST00000519141 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
SPIDR-209ENST00000519141 ITGAEP38570 1179 aa18.62■□□□□ 0.57
SPIDR-209ENST00000519141 HRCP23327 699 aa18.6■□□□□ 0.57
SPIDR-209ENST00000519141 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
SPIDR-209ENST00000519141 CDC42BPAQ5VT25 1732 aa18.59■□□□□ 0.57
SPIDR-209ENST00000519141 GPATCH8Q9UKJ3 1502 aaKnown RBP18.58■□□□□ 0.56
SPIDR-209ENST00000519141 PREX2Q70Z35 1606 aa18.53■□□□□ 0.56
SPIDR-209ENST00000519141 TTC37Q6PGP7 1564 aa18.53■□□□□ 0.56
SPIDR-209ENST00000519141 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms