RNA–Protein interactions for RNA: ENST00000518947.6

HOXA-AS3-202, HOXA cluster antisense RNA 3, humanhuman

TSL 2 BASIC

Gene HOXA-AS3, Length 3,992 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA-AS3-202ENST00000518947 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
HOXA-AS3-202ENST00000518947 CYB5RLQ6IPT4 315 aa17.66■□□□□ 0.42
HOXA-AS3-202ENST00000518947 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
HOXA-AS3-202ENST00000518947 MTUS2Q5JR59 1369 aa17.62■□□□□ 0.41
HOXA-AS3-202ENST00000518947 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
HOXA-AS3-202ENST00000518947 POLA1P09884 1462 aaPredicted RBP17.61■□□□□ 0.41
HOXA-AS3-202ENST00000518947 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
HOXA-AS3-202ENST00000518947 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
HOXA-AS3-202ENST00000518947 FMN1Q68DA7 1419 aa17.58■□□□□ 0.4
HOXA-AS3-202ENST00000518947 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
HOXA-AS3-202ENST00000518947 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
HOXA-AS3-202ENST00000518947 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
HOXA-AS3-202ENST00000518947 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
HOXA-AS3-202ENST00000518947 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
HOXA-AS3-202ENST00000518947 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
HOXA-AS3-202ENST00000518947 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
HOXA-AS3-202ENST00000518947 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
HOXA-AS3-202ENST00000518947 CUL7Q14999 1698 aa17.47■□□□□ 0.39
HOXA-AS3-202ENST00000518947 OSCARQ8IYS5 282 aa17.46■□□□□ 0.38
HOXA-AS3-202ENST00000518947 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
HOXA-AS3-202ENST00000518947 EFCAB5A4FU69 1503 aa17.44■□□□□ 0.38
HOXA-AS3-202ENST00000518947 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
HOXA-AS3-202ENST00000518947 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
HOXA-AS3-202ENST00000518947 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
HOXA-AS3-202ENST00000518947 CNGB1Q14028 1251 aaPredicted RBP17.37■□□□□ 0.37
HOXA-AS3-202ENST00000518947 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
HOXA-AS3-202ENST00000518947 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
HOXA-AS3-202ENST00000518947 CASKIN1Q8WXD9 1431 aa17.36■□□□□ 0.37
HOXA-AS3-202ENST00000518947 ESF1Q9H501 851 aaKnown RBP17.36■□□□□ 0.37
HOXA-AS3-202ENST00000518947 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
HOXA-AS3-202ENST00000518947 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
HOXA-AS3-202ENST00000518947 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
HOXA-AS3-202ENST00000518947 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
HOXA-AS3-202ENST00000518947 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
HOXA-AS3-202ENST00000518947 BCANQ96GW7 911 aa17.34■□□□□ 0.37
HOXA-AS3-202ENST00000518947 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
HOXA-AS3-202ENST00000518947 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
HOXA-AS3-202ENST00000518947 MAP3K1Q13233 1512 aa17.33■□□□□ 0.37
HOXA-AS3-202ENST00000518947 TIAM1Q13009 1591 aa17.33■□□□□ 0.36
HOXA-AS3-202ENST00000518947 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
HOXA-AS3-202ENST00000518947 POLR3GLQ9BT43 218 aa17.31■□□□□ 0.36
HOXA-AS3-202ENST00000518947 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
HOXA-AS3-202ENST00000518947 MLECQ14165 292 aa17.28■□□□□ 0.36
HOXA-AS3-202ENST00000518947 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
HOXA-AS3-202ENST00000518947 CARMIL2Q6F5E8 1435 aa17.28■□□□□ 0.36
HOXA-AS3-202ENST00000518947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.36
HOXA-AS3-202ENST00000518947 TONSLQ96HA7 1378 aa17.27■□□□□ 0.36
HOXA-AS3-202ENST00000518947 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
HOXA-AS3-202ENST00000518947 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
HOXA-AS3-202ENST00000518947 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
HOXA-AS3-202ENST00000518947 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
HOXA-AS3-202ENST00000518947 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
HOXA-AS3-202ENST00000518947 CCDC18Q5T9S5 1454 aa17.23■□□□□ 0.35
HOXA-AS3-202ENST00000518947 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
HOXA-AS3-202ENST00000518947 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
HOXA-AS3-202ENST00000518947 PCF11O94913 1555 aaKnown RBP17.22■□□□□ 0.35
HOXA-AS3-202ENST00000518947 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
HOXA-AS3-202ENST00000518947 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
HOXA-AS3-202ENST00000518947 ZNF326Q5BKZ1 582 aaKnown RBP17.21■□□□□ 0.34
HOXA-AS3-202ENST00000518947 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
HOXA-AS3-202ENST00000518947 FGD6Q6ZV73 1430 aa17.17■□□□□ 0.34
HOXA-AS3-202ENST00000518947 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
HOXA-AS3-202ENST00000518947 IQGAP2Q13576 1575 aa17.16■□□□□ 0.34
HOXA-AS3-202ENST00000518947 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
HOXA-AS3-202ENST00000518947 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
HOXA-AS3-202ENST00000518947 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
HOXA-AS3-202ENST00000518947 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
HOXA-AS3-202ENST00000518947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.33
HOXA-AS3-202ENST00000518947 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
HOXA-AS3-202ENST00000518947 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
HOXA-AS3-202ENST00000518947 KIAA0586Q9BVV6 1533 aa17.12■□□□□ 0.33
HOXA-AS3-202ENST00000518947 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
HOXA-AS3-202ENST00000518947 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
HOXA-AS3-202ENST00000518947 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
HOXA-AS3-202ENST00000518947 HECW1Q76N89 1606 aa17.11■□□□□ 0.33
HOXA-AS3-202ENST00000518947 SIN3AQ96ST3 1273 aa17.09■□□□□ 0.33
HOXA-AS3-202ENST00000518947 MIER1Q8N108 512 aa17.08■□□□□ 0.32
HOXA-AS3-202ENST00000518947 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
HOXA-AS3-202ENST00000518947 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
HOXA-AS3-202ENST00000518947 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
HOXA-AS3-202ENST00000518947 ANP32CO43423 234 aa17.06■□□□□ 0.32
HOXA-AS3-202ENST00000518947 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
HOXA-AS3-202ENST00000518947 CFAP43Q8NDM7 1665 aa17.05■□□□□ 0.32
HOXA-AS3-202ENST00000518947 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
HOXA-AS3-202ENST00000518947 ADAMTS12P58397 1594 aa17.05■□□□□ 0.32
HOXA-AS3-202ENST00000518947 WDR62O43379 1518 aa17.05■□□□□ 0.32
HOXA-AS3-202ENST00000518947 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
HOXA-AS3-202ENST00000518947 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
HOXA-AS3-202ENST00000518947 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
HOXA-AS3-202ENST00000518947 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
HOXA-AS3-202ENST00000518947 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
HOXA-AS3-202ENST00000518947 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
HOXA-AS3-202ENST00000518947 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
HOXA-AS3-202ENST00000518947 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
HOXA-AS3-202ENST00000518947 MIA2Q96PC5 1412 aa16.98■□□□□ 0.31
HOXA-AS3-202ENST00000518947 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
HOXA-AS3-202ENST00000518947 SAMD9Q5K651 1589 aa16.97■□□□□ 0.31
HOXA-AS3-202ENST00000518947 NEFLP07196 543 aa16.97■□□□□ 0.31
HOXA-AS3-202ENST00000518947 PTPRGP23470 1445 aa16.96■□□□□ 0.31
HOXA-AS3-202ENST00000518947 UACAQ9BZF9 1416 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms