RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 KIAA0586Q9BVV6 1533 aa39.89■■■■□ 3.98
PCM1-209ENST00000518930 GOLGA3Q08378 1498 aa39.82■■■■□ 3.97
PCM1-209ENST00000518930 IQGAP2Q13576 1575 aa39.82■■■■□ 3.97
PCM1-209ENST00000518930 SHROOM2Q13796 1616 aa39.8■■■■□ 3.96
PCM1-209ENST00000518930 ARHGEF11O15085 1522 aa39.7■■■■□ 3.95
PCM1-209ENST00000518930 EHMT2Q96KQ7 1210 aa39.7■■■■□ 3.95
PCM1-209ENST00000518930 RIMBP3CA6NJZ7 1639 aa39.67■■■■□ 3.94
PCM1-209ENST00000518930 RIMBP3BA6NNM3 1639 aa39.67■■■■□ 3.94
PCM1-209ENST00000518930 RIMBP3Q9UFD9 1639 aa39.67■■■■□ 3.94
PCM1-209ENST00000518930 JPH4Q96JJ6 628 aa39.67■■■■□ 3.94
PCM1-209ENST00000518930 UBTFP17480 764 aaKnown RBP39.62■■■■□ 3.93
PCM1-209ENST00000518930 PRG4Q92954 1404 aaPredicted RBP39.6■■■■□ 3.93
PCM1-209ENST00000518930 UGGT2Q9NYU1 1516 aa39.57■■■■□ 3.93
PCM1-209ENST00000518930 ERCC6L2Q5T890 1561 aa39.55■■■■□ 3.92
PCM1-209ENST00000518930 CARMIL2Q6F5E8 1435 aa39.49■■■■□ 3.91
PCM1-209ENST00000518930 KIAA0556O60303 1618 aa39.43■■■■□ 3.9
PCM1-209ENST00000518930 DISP1Q96F81 1524 aa39.42■■■■□ 3.9
PCM1-209ENST00000518930 ARAP1Q96P48 1450 aa39.41■■■■□ 3.9
PCM1-209ENST00000518930 TNIKQ9UKE5 1360 aa39.34■■■■□ 3.89
PCM1-209ENST00000518930 SAMD9Q5K651 1589 aa39.34■■■■□ 3.89
PCM1-209ENST00000518930 RANGAP1P46060 587 aaPredicted RBP39.33■■■■□ 3.89
PCM1-209ENST00000518930 EFCAB5A4FU69 1503 aa39.3■■■■□ 3.88
PCM1-209ENST00000518930 LOC105371045A0A1W2PR82 267 aa39.25■■■■□ 3.87
PCM1-209ENST00000518930 CYB5RLQ6IPT4 315 aa39.24■■■■□ 3.87
PCM1-209ENST00000518930 PTPRGP23470 1445 aa39.2■■■■□ 3.87
PCM1-209ENST00000518930 TTBK1Q5TCY1 1321 aaPredicted RBP39.17■■■■□ 3.86
PCM1-209ENST00000518930 P3H3Q8IVL6 736 aa39.16■■■■□ 3.86
PCM1-209ENST00000518930 ARHGAP35Q9NRY4 1499 aa39.11■■■■□ 3.85
PCM1-209ENST00000518930 FHOD3Q2V2M9 1422 aa39.1■■■■□ 3.85
PCM1-209ENST00000518930 CLIP1P30622 1438 aa39.09■■■■□ 3.85
PCM1-209ENST00000518930 CEP162Q5TB80 1403 aa39.06■■■■□ 3.84
PCM1-209ENST00000518930 ADCY10Q96PN6 1610 aa38.97■■■■□ 3.83
PCM1-209ENST00000518930 UACAQ9BZF9 1416 aa38.97■■■■□ 3.83
PCM1-209ENST00000518930 ABCC2Q92887 1545 aa38.93■■■■□ 3.82
PCM1-209ENST00000518930 ABCA8O94911 1581 aa38.92■■■■□ 3.82
PCM1-209ENST00000518930 PLB1Q6P1J6 1458 aa38.92■■■■□ 3.82
PCM1-209ENST00000518930 UHRF1BP1LA0JNW5 1464 aa38.91■■■■□ 3.82
PCM1-209ENST00000518930 FMN1Q68DA7 1419 aa38.89■■■■□ 3.82
PCM1-209ENST00000518930 RAPGEF6Q8TEU7 1601 aa38.88■■■■□ 3.81
PCM1-209ENST00000518930 NPM1P06748 294 aaKnown RBP eCLIP38.77■■■■□ 3.8
PCM1-209ENST00000518930 HECW1Q76N89 1606 aa38.72■■■■□ 3.79
PCM1-209ENST00000518930 ZCCHC11Q5TAX3 1644 aaKnown RBP38.71■■■■□ 3.79
PCM1-209ENST00000518930 KDM5BQ9UGL1 1544 aa38.7■■■■□ 3.79
PCM1-209ENST00000518930 PCF11O94913 1555 aaKnown RBP38.69■■■■□ 3.78
PCM1-209ENST00000518930 NUP153P49790 1475 aaKnown RBP38.66■■■■□ 3.78
PCM1-209ENST00000518930 CASKIN1Q8WXD9 1431 aa38.63■■■■□ 3.77
PCM1-209ENST00000518930 MAPKBP1O60336 1514 aa38.62■■■■□ 3.77
PCM1-209ENST00000518930 FYCO1Q9BQS8 1478 aa38.61■■■■□ 3.77
PCM1-209ENST00000518930 ATP1B4Q9UN42 357 aaPredicted RBP38.6■■■■□ 3.77
PCM1-209ENST00000518930 ARID3CA6NKF2 412 aa38.58■■■■□ 3.77
PCM1-209ENST00000518930 ATP10BO94823 1461 aa38.55■■■■□ 3.76
PCM1-209ENST00000518930 VPS8Q8N3P4 1428 aa38.55■■■■□ 3.76
PCM1-209ENST00000518930 EPRSP07814 1512 aaKnown RBP38.51■■■■□ 3.76
PCM1-209ENST00000518930 LRRIQ1Q96JM4 1722 aa38.49■■■■□ 3.75
PCM1-209ENST00000518930 ASXL2Q76L83 1435 aa38.49■■■■□ 3.75
PCM1-209ENST00000518930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.49■■■■□ 3.75
PCM1-209ENST00000518930 HNRNPUL2Q1KMD3 747 aaKnown RBP38.49■■■■□ 3.75
PCM1-209ENST00000518930 CDK13Q14004 1512 aaKnown RBP38.48■■■■□ 3.75
PCM1-209ENST00000518930 CCDC18Q5T9S5 1454 aa38.47■■■■□ 3.75
PCM1-209ENST00000518930 WDR7Q9Y4E6 1490 aa38.41■■■■□ 3.74
PCM1-209ENST00000518930 DIP2BQ9P265 1576 aa38.33■■■■□ 3.73
PCM1-209ENST00000518930 ABCC10Q5T3U5 1492 aa38.33■■■■□ 3.73
PCM1-209ENST00000518930 TRHP20396 242 aaPredicted RBP38.3■■■■□ 3.72
PCM1-209ENST00000518930 CDK11AQ9UQ88 783 aaPredicted RBP38.3■■■■□ 3.72
PCM1-209ENST00000518930 KIF13AQ9H1H9 1805 aa38.29■■■■□ 3.72
PCM1-209ENST00000518930 PLEKHD1A6NEE1 506 aa38.29■■■■□ 3.72
PCM1-209ENST00000518930 CFAP43Q8NDM7 1665 aa38.27■■■■□ 3.72
PCM1-209ENST00000518930 GLI2P10070 1586 aa38.21■■■■□ 3.71
PCM1-209ENST00000518930 TIAM1Q13009 1591 aa38.2■■■■□ 3.71
PCM1-209ENST00000518930 FAM69CQ0P6D2 419 aa38.2■■■■□ 3.71
PCM1-209ENST00000518930 KCNH8Q96L42 1107 aa38.19■■■■□ 3.7
PCM1-209ENST00000518930 TROQ12816 1431 aaPredicted RBP38.18■■■■□ 3.7
PCM1-209ENST00000518930 MAP3K1Q13233 1512 aa38.13■■■■□ 3.69
PCM1-209ENST00000518930 MAGI3Q5TCQ9 1506 aa38.13■■■■□ 3.69
PCM1-209ENST00000518930 KIF14Q15058 1648 aa38.13■■■■□ 3.69
PCM1-209ENST00000518930 APLP2Q06481 763 aa38.12■■■■□ 3.69
PCM1-209ENST00000518930 MTUS2Q5JR59 1369 aa38.1■■■■□ 3.69
PCM1-209ENST00000518930 EHBP1L1Q8N3D4 1523 aa38.1■■■■□ 3.69
PCM1-209ENST00000518930 ABCA9Q8IUA7 1624 aa38.09■■■■□ 3.69
PCM1-209ENST00000518930 MAP3K4Q9Y6R4 1608 aa38.09■■■■□ 3.69
PCM1-209ENST00000518930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.02■■■■□ 3.68
PCM1-209ENST00000518930 TSPOAP1O95153 1857 aa38.02■■■■□ 3.68
PCM1-209ENST00000518930 TTC37Q6PGP7 1564 aa38.01■■■■□ 3.67
PCM1-209ENST00000518930 LRRC9Q6ZRR7 1453 aa37.99■■■■□ 3.67
PCM1-209ENST00000518930 CD109Q6YHK3 1445 aa37.97■■■■□ 3.67
PCM1-209ENST00000518930 SUPT6HQ7KZ85 1726 aaKnown RBP37.94■■■■□ 3.66
PCM1-209ENST00000518930 MYO5CQ9NQX4 1742 aa37.92■■■■□ 3.66
PCM1-209ENST00000518930 PPRC1Q5VV67 1664 aaKnown RBP37.92■■■■□ 3.66
PCM1-209ENST00000518930 TEX14Q8IWB6 1497 aa37.89■■■■□ 3.66
PCM1-209ENST00000518930 KANK4Q5T7N3 995 aaPredicted RBP37.85■■■■□ 3.65
PCM1-209ENST00000518930 NCOA2Q15596 1464 aa37.81■■■■□ 3.64
PCM1-209ENST00000518930 PREX2Q70Z35 1606 aa37.8■■■■□ 3.64
PCM1-209ENST00000518930 CDC42BPAQ5VT25 1732 aa37.79■■■■□ 3.64
PCM1-209ENST00000518930 CFAP74Q9C0B2 1584 aa37.79■■■■□ 3.64
PCM1-209ENST00000518930 PLCH2O75038 1416 aa37.78■■■■□ 3.64
PCM1-209ENST00000518930 ARAP3Q8WWN8 1544 aa37.77■■■■□ 3.64
PCM1-209ENST00000518930 CCNB3Q8WWL7 1395 aa37.77■■■■□ 3.64
PCM1-209ENST00000518930 ITSN2Q9NZM3 1697 aa37.76■■■■□ 3.64
PCM1-209ENST00000518930 ARHGAP5Q13017 1502 aa37.74■■■■□ 3.63
PCM1-209ENST00000518930 CDC42BPBQ9Y5S2 1711 aa37.73■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms