RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.1
TSNARE1-202ENST00000518720 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
TSNARE1-202ENST00000518720 IQGAP2Q13576 1575 aa28.09■■■□□ 2.09
TSNARE1-202ENST00000518720 KIAA0586Q9BVV6 1533 aa28.08■■■□□ 2.08
TSNARE1-202ENST00000518720 SHROOM2Q13796 1616 aa28.02■■■□□ 2.08
TSNARE1-202ENST00000518720 UBTFP17480 764 aaKnown RBP28.01■■■□□ 2.07
TSNARE1-202ENST00000518720 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
TSNARE1-202ENST00000518720 ARHGEF11O15085 1522 aa27.89■■■□□ 2.06
TSNARE1-202ENST00000518720 UGGT2Q9NYU1 1516 aa27.89■■■□□ 2.06
TSNARE1-202ENST00000518720 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.05
TSNARE1-202ENST00000518720 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.05
TSNARE1-202ENST00000518720 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.05
TSNARE1-202ENST00000518720 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.05
TSNARE1-202ENST00000518720 PRG4Q92954 1404 aaPredicted RBP27.88■■■□□ 2.05
TSNARE1-202ENST00000518720 LOC105371045A0A1W2PR82 267 aa27.86■■■□□ 2.05
TSNARE1-202ENST00000518720 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
TSNARE1-202ENST00000518720 KIAA0556O60303 1618 aa27.82■■■□□ 2.04
TSNARE1-202ENST00000518720 TNIKQ9UKE5 1360 aa27.82■■■□□ 2.04
TSNARE1-202ENST00000518720 DISP1Q96F81 1524 aa27.79■■■□□ 2.04
TSNARE1-202ENST00000518720 CARMIL2Q6F5E8 1435 aa27.78■■■□□ 2.04
TSNARE1-202ENST00000518720 SAMD9Q5K651 1589 aa27.77■■■□□ 2.04
TSNARE1-202ENST00000518720 EFCAB5A4FU69 1503 aa27.74■■■□□ 2.03
TSNARE1-202ENST00000518720 ARAP1Q96P48 1450 aa27.7■■■□□ 2.03
TSNARE1-202ENST00000518720 P3H3Q8IVL6 736 aa27.67■■■□□ 2.02
TSNARE1-202ENST00000518720 CEP162Q5TB80 1403 aa27.66■■■□□ 2.02
TSNARE1-202ENST00000518720 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
TSNARE1-202ENST00000518720 CLIP1P30622 1438 aa27.65■■■□□ 2.02
TSNARE1-202ENST00000518720 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
TSNARE1-202ENST00000518720 FHOD3Q2V2M9 1422 aa27.64■■■□□ 2.02
TSNARE1-202ENST00000518720 PTPRGP23470 1445 aa27.58■■■□□ 2.01
TSNARE1-202ENST00000518720 CYB5RLQ6IPT4 315 aa27.54■■■□□ 2
TSNARE1-202ENST00000518720 ADCY10Q96PN6 1610 aa27.46■■□□□ 1.99
TSNARE1-202ENST00000518720 PLB1Q6P1J6 1458 aa27.45■■□□□ 1.99
TSNARE1-202ENST00000518720 RAPGEF6Q8TEU7 1601 aa27.45■■□□□ 1.98
TSNARE1-202ENST00000518720 ABCA8O94911 1581 aa27.43■■□□□ 1.98
TSNARE1-202ENST00000518720 FMN1Q68DA7 1419 aa27.42■■□□□ 1.98
TSNARE1-202ENST00000518720 UACAQ9BZF9 1416 aa27.42■■□□□ 1.98
TSNARE1-202ENST00000518720 ABCC2Q92887 1545 aa27.41■■□□□ 1.98
TSNARE1-202ENST00000518720 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.97
TSNARE1-202ENST00000518720 UHRF1BP1LA0JNW5 1464 aa27.36■■□□□ 1.97
TSNARE1-202ENST00000518720 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
TSNARE1-202ENST00000518720 ZCCHC11Q5TAX3 1644 aaKnown RBP27.3■■□□□ 1.96
TSNARE1-202ENST00000518720 NUP153P49790 1475 aaKnown RBP27.28■■□□□ 1.96
TSNARE1-202ENST00000518720 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
TSNARE1-202ENST00000518720 FYCO1Q9BQS8 1478 aa27.27■■□□□ 1.96
TSNARE1-202ENST00000518720 VPS8Q8N3P4 1428 aa27.27■■□□□ 1.96
TSNARE1-202ENST00000518720 ARID3CA6NKF2 412 aa27.27■■□□□ 1.96
TSNARE1-202ENST00000518720 CASKIN1Q8WXD9 1431 aa27.26■■□□□ 1.95
TSNARE1-202ENST00000518720 LRRIQ1Q96JM4 1722 aa27.26■■□□□ 1.95
TSNARE1-202ENST00000518720 KDM5BQ9UGL1 1544 aa27.23■■□□□ 1.95
TSNARE1-202ENST00000518720 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
TSNARE1-202ENST00000518720 CDK13Q14004 1512 aaKnown RBP27.21■■□□□ 1.95
TSNARE1-202ENST00000518720 EPRSP07814 1512 aaKnown RBP27.17■■□□□ 1.94
TSNARE1-202ENST00000518720 ATP10BO94823 1461 aa27.17■■□□□ 1.94
TSNARE1-202ENST00000518720 CCDC18Q5T9S5 1454 aa27.14■■□□□ 1.94
TSNARE1-202ENST00000518720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.94
TSNARE1-202ENST00000518720 HNRNPUL2Q1KMD3 747 aaKnown RBP27.14■■□□□ 1.94
TSNARE1-202ENST00000518720 MAPKBP1O60336 1514 aa27.13■■□□□ 1.93
TSNARE1-202ENST00000518720 CFAP43Q8NDM7 1665 aa27.11■■□□□ 1.93
TSNARE1-202ENST00000518720 ASXL2Q76L83 1435 aa27.08■■□□□ 1.93
TSNARE1-202ENST00000518720 WDR7Q9Y4E6 1490 aa27.05■■□□□ 1.92
TSNARE1-202ENST00000518720 TIAM1Q13009 1591 aa27.03■■□□□ 1.92
TSNARE1-202ENST00000518720 DIP2BQ9P265 1576 aa26.97■■□□□ 1.91
TSNARE1-202ENST00000518720 MAGI3Q5TCQ9 1506 aa26.97■■□□□ 1.91
TSNARE1-202ENST00000518720 KIF13AQ9H1H9 1805 aa26.97■■□□□ 1.91
TSNARE1-202ENST00000518720 PLEKHD1A6NEE1 506 aa26.95■■□□□ 1.9
TSNARE1-202ENST00000518720 APLP2Q06481 763 aa26.95■■□□□ 1.9
TSNARE1-202ENST00000518720 CDK11AQ9UQ88 783 aaPredicted RBP26.95■■□□□ 1.9
TSNARE1-202ENST00000518720 TROQ12816 1431 aaPredicted RBP26.92■■□□□ 1.9
TSNARE1-202ENST00000518720 MAP3K1Q13233 1512 aa26.92■■□□□ 1.9
TSNARE1-202ENST00000518720 EHBP1L1Q8N3D4 1523 aa26.92■■□□□ 1.9
TSNARE1-202ENST00000518720 KIF14Q15058 1648 aa26.92■■□□□ 1.9
TSNARE1-202ENST00000518720 ABCC10Q5T3U5 1492 aa26.92■■□□□ 1.9
TSNARE1-202ENST00000518720 KCNH8Q96L42 1107 aa26.91■■□□□ 1.9
TSNARE1-202ENST00000518720 MTUS2Q5JR59 1369 aa26.9■■□□□ 1.9
TSNARE1-202ENST00000518720 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
TSNARE1-202ENST00000518720 LRRC9Q6ZRR7 1453 aa26.86■■□□□ 1.89
TSNARE1-202ENST00000518720 GLI2P10070 1586 aa26.85■■□□□ 1.89
TSNARE1-202ENST00000518720 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
TSNARE1-202ENST00000518720 TSPOAP1O95153 1857 aa26.84■■□□□ 1.89
TSNARE1-202ENST00000518720 ABCA9Q8IUA7 1624 aa26.83■■□□□ 1.89
TSNARE1-202ENST00000518720 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
TSNARE1-202ENST00000518720 SUPT6HQ7KZ85 1726 aaKnown RBP26.82■■□□□ 1.88
TSNARE1-202ENST00000518720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.81■■□□□ 1.88
TSNARE1-202ENST00000518720 MAP3K4Q9Y6R4 1608 aa26.81■■□□□ 1.88
TSNARE1-202ENST00000518720 KANK4Q5T7N3 995 aaPredicted RBP26.8■■□□□ 1.88
TSNARE1-202ENST00000518720 MYO5CQ9NQX4 1742 aa26.77■■□□□ 1.88
TSNARE1-202ENST00000518720 CDC42BPAQ5VT25 1732 aa26.72■■□□□ 1.87
TSNARE1-202ENST00000518720 NCOA2Q15596 1464 aa26.72■■□□□ 1.87
TSNARE1-202ENST00000518720 PPRC1Q5VV67 1664 aaKnown RBP26.71■■□□□ 1.87
TSNARE1-202ENST00000518720 CD109Q6YHK3 1445 aa26.71■■□□□ 1.87
TSNARE1-202ENST00000518720 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.86
TSNARE1-202ENST00000518720 ITSN2Q9NZM3 1697 aa26.69■■□□□ 1.86
TSNARE1-202ENST00000518720 PREX2Q70Z35 1606 aa26.68■■□□□ 1.86
TSNARE1-202ENST00000518720 CDC42BPBQ9Y5S2 1711 aa26.66■■□□□ 1.86
TSNARE1-202ENST00000518720 CCNB3Q8WWL7 1395 aa26.64■■□□□ 1.86
TSNARE1-202ENST00000518720 ARHGAP5Q13017 1502 aa26.63■■□□□ 1.85
TSNARE1-202ENST00000518720 CFAP74Q9C0B2 1584 aa26.61■■□□□ 1.85
TSNARE1-202ENST00000518720 TEX14Q8IWB6 1497 aa26.61■■□□□ 1.85
TSNARE1-202ENST00000518720 GPATCH8Q9UKJ3 1502 aaKnown RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms