RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 SHROOM2Q13796 1616 aa37.78■■■■□ 3.64
NKX6-3-201ENST00000518699 GOLGA3Q08378 1498 aa37.74■■■■□ 3.63
NKX6-3-201ENST00000518699 IQGAP2Q13576 1575 aa37.74■■■■□ 3.63
NKX6-3-201ENST00000518699 DNAJC5Q9H3Z4 198 aa37.73■■■■□ 3.63
NKX6-3-201ENST00000518699 ARHGEF11O15085 1522 aa37.59■■■■□ 3.61
NKX6-3-201ENST00000518699 RIMBP3CA6NJZ7 1639 aa37.56■■■■□ 3.6
NKX6-3-201ENST00000518699 RIMBP3BA6NNM3 1639 aa37.56■■■■□ 3.6
NKX6-3-201ENST00000518699 RIMBP3Q9UFD9 1639 aa37.56■■■■□ 3.6
NKX6-3-201ENST00000518699 UGGT2Q9NYU1 1516 aa37.55■■■■□ 3.6
NKX6-3-201ENST00000518699 JPH4Q96JJ6 628 aa37.53■■■■□ 3.6
NKX6-3-201ENST00000518699 ERCC6L2Q5T890 1561 aa37.49■■■■□ 3.59
NKX6-3-201ENST00000518699 PRG4Q92954 1404 aaPredicted RBP37.48■■■■□ 3.59
NKX6-3-201ENST00000518699 UBTFP17480 764 aaKnown RBP37.4■■■■□ 3.58
NKX6-3-201ENST00000518699 EHMT2Q96KQ7 1210 aa37.4■■■■□ 3.58
NKX6-3-201ENST00000518699 DISP1Q96F81 1524 aa37.39■■■■□ 3.58
NKX6-3-201ENST00000518699 KIAA0556O60303 1618 aa37.39■■■■□ 3.58
NKX6-3-201ENST00000518699 SAMD9Q5K651 1589 aa37.35■■■■□ 3.57
NKX6-3-201ENST00000518699 CARMIL2Q6F5E8 1435 aa37.35■■■■□ 3.57
NKX6-3-201ENST00000518699 ARAP1Q96P48 1450 aa37.34■■■■□ 3.57
NKX6-3-201ENST00000518699 TNIKQ9UKE5 1360 aa37.31■■■■□ 3.56
NKX6-3-201ENST00000518699 EFCAB5A4FU69 1503 aa37.28■■■■□ 3.56
NKX6-3-201ENST00000518699 LOC105371045A0A1W2PR82 267 aa37.13■■■■□ 3.53
NKX6-3-201ENST00000518699 ARHGAP35Q9NRY4 1499 aa37.1■■■■□ 3.53
NKX6-3-201ENST00000518699 PTPRGP23470 1445 aa37.08■■■■□ 3.53
NKX6-3-201ENST00000518699 RANGAP1P46060 587 aaPredicted RBP37.05■■■■□ 3.52
NKX6-3-201ENST00000518699 CYB5RLQ6IPT4 315 aa37.03■■■■□ 3.52
NKX6-3-201ENST00000518699 CLIP1P30622 1438 aa37.02■■■■□ 3.52
NKX6-3-201ENST00000518699 FHOD3Q2V2M9 1422 aa37.02■■■■□ 3.52
NKX6-3-201ENST00000518699 CEP162Q5TB80 1403 aa37.01■■■■□ 3.52
NKX6-3-201ENST00000518699 P3H3Q8IVL6 736 aa36.96■■■■□ 3.51
NKX6-3-201ENST00000518699 ADCY10Q96PN6 1610 aa36.95■■■■□ 3.5
NKX6-3-201ENST00000518699 ABCA8O94911 1581 aa36.92■■■■□ 3.5
NKX6-3-201ENST00000518699 UHRF1BP1LA0JNW5 1464 aa36.9■■■■□ 3.5
NKX6-3-201ENST00000518699 UACAQ9BZF9 1416 aa36.9■■■■□ 3.5
NKX6-3-201ENST00000518699 ABCC2Q92887 1545 aa36.89■■■■□ 3.5
NKX6-3-201ENST00000518699 TTBK1Q5TCY1 1321 aaPredicted RBP36.87■■■■□ 3.49
NKX6-3-201ENST00000518699 PLB1Q6P1J6 1458 aa36.86■■■■□ 3.49
NKX6-3-201ENST00000518699 RAPGEF6Q8TEU7 1601 aa36.84■■■■□ 3.49
NKX6-3-201ENST00000518699 FMN1Q68DA7 1419 aa36.84■■■■□ 3.49
NKX6-3-201ENST00000518699 KDM5BQ9UGL1 1544 aa36.71■■■■□ 3.47
NKX6-3-201ENST00000518699 PCF11O94913 1555 aaKnown RBP36.69■■■■□ 3.46
NKX6-3-201ENST00000518699 HECW1Q76N89 1606 aa36.68■■■■□ 3.46
NKX6-3-201ENST00000518699 ZCCHC11Q5TAX3 1644 aaKnown RBP36.68■■■■□ 3.46
NKX6-3-201ENST00000518699 NUP153P49790 1475 aaKnown RBP36.67■■■■□ 3.46
NKX6-3-201ENST00000518699 MAPKBP1O60336 1514 aa36.62■■■■□ 3.45
NKX6-3-201ENST00000518699 CASKIN1Q8WXD9 1431 aa36.61■■■■□ 3.45
NKX6-3-201ENST00000518699 FYCO1Q9BQS8 1478 aa36.61■■■■□ 3.45
NKX6-3-201ENST00000518699 VPS8Q8N3P4 1428 aa36.56■■■■□ 3.44
NKX6-3-201ENST00000518699 NPM1P06748 294 aaKnown RBP eCLIP36.55■■■■□ 3.44
NKX6-3-201ENST00000518699 LRRIQ1Q96JM4 1722 aa36.55■■■■□ 3.44
NKX6-3-201ENST00000518699 ATP10BO94823 1461 aa36.53■■■■□ 3.44
NKX6-3-201ENST00000518699 EPRSP07814 1512 aaKnown RBP36.5■■■■□ 3.43
NKX6-3-201ENST00000518699 CCDC18Q5T9S5 1454 aa36.45■■■■□ 3.43
NKX6-3-201ENST00000518699 CDK13Q14004 1512 aaKnown RBP36.45■■■■□ 3.43
NKX6-3-201ENST00000518699 ASXL2Q76L83 1435 aa36.43■■■■□ 3.42
NKX6-3-201ENST00000518699 WDR7Q9Y4E6 1490 aa36.38■■■■□ 3.41
NKX6-3-201ENST00000518699 ARID3CA6NKF2 412 aa36.38■■■■□ 3.41
NKX6-3-201ENST00000518699 ATP1B4Q9UN42 357 aaPredicted RBP36.35■■■■□ 3.41
NKX6-3-201ENST00000518699 DIP2BQ9P265 1576 aa36.34■■■■□ 3.41
NKX6-3-201ENST00000518699 CFAP43Q8NDM7 1665 aa36.34■■■■□ 3.41
NKX6-3-201ENST00000518699 KIF13AQ9H1H9 1805 aa36.31■■■■□ 3.4
NKX6-3-201ENST00000518699 ABCC10Q5T3U5 1492 aa36.3■■■■□ 3.4
NKX6-3-201ENST00000518699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.27■■■■□ 3.4
NKX6-3-201ENST00000518699 HNRNPUL2Q1KMD3 747 aaKnown RBP36.27■■■■□ 3.4
NKX6-3-201ENST00000518699 GLI2P10070 1586 aa36.24■■■■□ 3.39
NKX6-3-201ENST00000518699 TIAM1Q13009 1591 aa36.23■■■■□ 3.39
NKX6-3-201ENST00000518699 MAP3K1Q13233 1512 aa36.22■■■■□ 3.39
NKX6-3-201ENST00000518699 MAGI3Q5TCQ9 1506 aa36.2■■■■□ 3.39
NKX6-3-201ENST00000518699 CDK11AQ9UQ88 783 aaPredicted RBP36.18■■■■□ 3.38
NKX6-3-201ENST00000518699 TROQ12816 1431 aaPredicted RBP36.17■■■■□ 3.38
NKX6-3-201ENST00000518699 PLEKHD1A6NEE1 506 aa36.17■■■■□ 3.38
NKX6-3-201ENST00000518699 ABCA9Q8IUA7 1624 aa36.13■■■■□ 3.37
NKX6-3-201ENST00000518699 KIF14Q15058 1648 aa36.12■■■■□ 3.37
NKX6-3-201ENST00000518699 MAP3K4Q9Y6R4 1608 aa36.12■■■■□ 3.37
NKX6-3-201ENST00000518699 EHBP1L1Q8N3D4 1523 aa36.12■■■■□ 3.37
NKX6-3-201ENST00000518699 TRHP20396 242 aaPredicted RBP36.06■■■■□ 3.36
NKX6-3-201ENST00000518699 FAM69CQ0P6D2 419 aa36.06■■■■□ 3.36
NKX6-3-201ENST00000518699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.04■■■■□ 3.36
NKX6-3-201ENST00000518699 KCNH8Q96L42 1107 aa36.03■■■■□ 3.36
NKX6-3-201ENST00000518699 TTC37Q6PGP7 1564 aa36.03■■■■□ 3.36
NKX6-3-201ENST00000518699 MTUS2Q5JR59 1369 aa36.03■■■■□ 3.36
NKX6-3-201ENST00000518699 LRRC9Q6ZRR7 1453 aa36.01■■■■□ 3.36
NKX6-3-201ENST00000518699 PPRC1Q5VV67 1664 aaKnown RBP35.98■■■■□ 3.35
NKX6-3-201ENST00000518699 APLP2Q06481 763 aa35.95■■■■□ 3.35
NKX6-3-201ENST00000518699 SUPT6HQ7KZ85 1726 aaKnown RBP35.95■■■■□ 3.35
NKX6-3-201ENST00000518699 TSPOAP1O95153 1857 aa35.95■■■■□ 3.35
NKX6-3-201ENST00000518699 MYO5CQ9NQX4 1742 aa35.93■■■■□ 3.34
NKX6-3-201ENST00000518699 CD109Q6YHK3 1445 aa35.91■■■■□ 3.34
NKX6-3-201ENST00000518699 ARAP3Q8WWN8 1544 aa35.86■■■■□ 3.33
NKX6-3-201ENST00000518699 PREX2Q70Z35 1606 aa35.85■■■■□ 3.33
NKX6-3-201ENST00000518699 CDC42BPAQ5VT25 1732 aa35.85■■■■□ 3.33
NKX6-3-201ENST00000518699 KANK4Q5T7N3 995 aaPredicted RBP35.85■■■■□ 3.33
NKX6-3-201ENST00000518699 TEX14Q8IWB6 1497 aa35.84■■■■□ 3.33
NKX6-3-201ENST00000518699 NCOA2Q15596 1464 aa35.83■■■■□ 3.33
NKX6-3-201ENST00000518699 ITSN2Q9NZM3 1697 aa35.8■■■■□ 3.32
NKX6-3-201ENST00000518699 CFAP74Q9C0B2 1584 aa35.79■■■■□ 3.32
NKX6-3-201ENST00000518699 CDC42BPBQ9Y5S2 1711 aa35.79■■■■□ 3.32
NKX6-3-201ENST00000518699 PLCH2O75038 1416 aa35.78■■■■□ 3.32
NKX6-3-201ENST00000518699 GPATCH8Q9UKJ3 1502 aaKnown RBP35.73■■■■□ 3.31
NKX6-3-201ENST00000518699 NEO1Q92859 1461 aa35.72■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms