RNA–Protein interactions for RNA: ENST00000518549.1

CPA6-203, Transcript of carboxypeptidase A6, humanhuman

TSL 1 (best)

Gene CPA6, Length 1,538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA6-203ENST00000518549 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
CPA6-203ENST00000518549 GOLGA3Q08378 1498 aa21.75■■□□□ 1.07
CPA6-203ENST00000518549 IQGAP2Q13576 1575 aa21.74■■□□□ 1.07
CPA6-203ENST00000518549 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
CPA6-203ENST00000518549 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
CPA6-203ENST00000518549 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
CPA6-203ENST00000518549 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
CPA6-203ENST00000518549 RIMBP3CA6NJZ7 1639 aa21.65■■□□□ 1.06
CPA6-203ENST00000518549 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
CPA6-203ENST00000518549 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
CPA6-203ENST00000518549 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
CPA6-203ENST00000518549 UGGT2Q9NYU1 1516 aa21.62■■□□□ 1.05
CPA6-203ENST00000518549 PRG4Q92954 1404 aaPredicted RBP21.62■■□□□ 1.05
CPA6-203ENST00000518549 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
CPA6-203ENST00000518549 DISP1Q96F81 1524 aa21.57■■□□□ 1.04
CPA6-203ENST00000518549 KIAA0556O60303 1618 aa21.56■■□□□ 1.04
CPA6-203ENST00000518549 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
CPA6-203ENST00000518549 SAMD9Q5K651 1589 aa21.52■■□□□ 1.04
CPA6-203ENST00000518549 CARMIL2Q6F5E8 1435 aa21.5■■□□□ 1.03
CPA6-203ENST00000518549 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
CPA6-203ENST00000518549 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
CPA6-203ENST00000518549 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
CPA6-203ENST00000518549 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
CPA6-203ENST00000518549 ARHGAP35Q9NRY4 1499 aa21.41■■□□□ 1.02
CPA6-203ENST00000518549 FHOD3Q2V2M9 1422 aa21.39■■□□□ 1.01
CPA6-203ENST00000518549 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
CPA6-203ENST00000518549 P3H3Q8IVL6 736 aa21.39■■□□□ 1.01
CPA6-203ENST00000518549 PTPRGP23470 1445 aa21.37■■□□□ 1.01
CPA6-203ENST00000518549 TTBK1Q5TCY1 1321 aaPredicted RBP21.37■■□□□ 1.01
CPA6-203ENST00000518549 CLIP1P30622 1438 aa21.36■■□□□ 1.01
CPA6-203ENST00000518549 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
CPA6-203ENST00000518549 ADCY10Q96PN6 1610 aa21.31■■□□□ 1
CPA6-203ENST00000518549 PLB1Q6P1J6 1458 aa21.29■■□□□ 1
CPA6-203ENST00000518549 ABCA8O94911 1581 aa21.28■■□□□ 1
CPA6-203ENST00000518549 UACAQ9BZF9 1416 aa21.27■■□□□ 1
CPA6-203ENST00000518549 ABCC2Q92887 1545 aa21.26■□□□□ 0.99
CPA6-203ENST00000518549 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
CPA6-203ENST00000518549 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
CPA6-203ENST00000518549 FMN1Q68DA7 1419 aa21.21■□□□□ 0.99
CPA6-203ENST00000518549 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
CPA6-203ENST00000518549 NUP153P49790 1475 aaKnown RBP21.16■□□□□ 0.98
CPA6-203ENST00000518549 KDM5BQ9UGL1 1544 aa21.15■□□□□ 0.98
CPA6-203ENST00000518549 ZCCHC11Q5TAX3 1644 aaKnown RBP21.14■□□□□ 0.98
CPA6-203ENST00000518549 HECW1Q76N89 1606 aa21.13■□□□□ 0.97
CPA6-203ENST00000518549 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
CPA6-203ENST00000518549 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
CPA6-203ENST00000518549 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
CPA6-203ENST00000518549 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
CPA6-203ENST00000518549 MAPKBP1O60336 1514 aa21.08■□□□□ 0.97
CPA6-203ENST00000518549 ATP10BO94823 1461 aa21.07■□□□□ 0.96
CPA6-203ENST00000518549 VPS8Q8N3P4 1428 aa21.07■□□□□ 0.96
CPA6-203ENST00000518549 CDK13Q14004 1512 aaKnown RBP21.06■□□□□ 0.96
CPA6-203ENST00000518549 EPRSP07814 1512 aaKnown RBP21.05■□□□□ 0.96
CPA6-203ENST00000518549 NPM1P06748 294 aaKnown RBP eCLIP21.04■□□□□ 0.96
CPA6-203ENST00000518549 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.96
CPA6-203ENST00000518549 ASXL2Q76L83 1435 aa21.01■□□□□ 0.95
CPA6-203ENST00000518549 CCDC18Q5T9S5 1454 aa20.99■□□□□ 0.95
CPA6-203ENST00000518549 WDR7Q9Y4E6 1490 aa20.97■□□□□ 0.95
CPA6-203ENST00000518549 DIP2BQ9P265 1576 aa20.95■□□□□ 0.94
CPA6-203ENST00000518549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
CPA6-203ENST00000518549 HNRNPUL2Q1KMD3 747 aaKnown RBP20.94■□□□□ 0.94
CPA6-203ENST00000518549 CFAP43Q8NDM7 1665 aa20.93■□□□□ 0.94
CPA6-203ENST00000518549 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
CPA6-203ENST00000518549 MAGI3Q5TCQ9 1506 aa20.91■□□□□ 0.94
CPA6-203ENST00000518549 KIF13AQ9H1H9 1805 aa20.91■□□□□ 0.94
CPA6-203ENST00000518549 TIAM1Q13009 1591 aa20.89■□□□□ 0.94
CPA6-203ENST00000518549 GLI2P10070 1586 aa20.85■□□□□ 0.93
CPA6-203ENST00000518549 PLEKHD1A6NEE1 506 aa20.84■□□□□ 0.93
CPA6-203ENST00000518549 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
CPA6-203ENST00000518549 KIF14Q15058 1648 aa20.83■□□□□ 0.93
CPA6-203ENST00000518549 MAP3K1Q13233 1512 aa20.82■□□□□ 0.92
CPA6-203ENST00000518549 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
CPA6-203ENST00000518549 KCNH8Q96L42 1107 aa20.82■□□□□ 0.92
CPA6-203ENST00000518549 FAM69CQ0P6D2 419 aa20.81■□□□□ 0.92
CPA6-203ENST00000518549 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
CPA6-203ENST00000518549 MAP3K4Q9Y6R4 1608 aa20.81■□□□□ 0.92
CPA6-203ENST00000518549 EHBP1L1Q8N3D4 1523 aa20.8■□□□□ 0.92
CPA6-203ENST00000518549 ABCA9Q8IUA7 1624 aa20.8■□□□□ 0.92
CPA6-203ENST00000518549 TTC37Q6PGP7 1564 aa20.8■□□□□ 0.92
CPA6-203ENST00000518549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.79■□□□□ 0.92
CPA6-203ENST00000518549 LRRC9Q6ZRR7 1453 aa20.77■□□□□ 0.92
CPA6-203ENST00000518549 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.92
CPA6-203ENST00000518549 PPRC1Q5VV67 1664 aaKnown RBP20.75■□□□□ 0.91
CPA6-203ENST00000518549 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
CPA6-203ENST00000518549 TSPOAP1O95153 1857 aa20.72■□□□□ 0.91
CPA6-203ENST00000518549 APLP2Q06481 763 aa20.71■□□□□ 0.91
CPA6-203ENST00000518549 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
CPA6-203ENST00000518549 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
CPA6-203ENST00000518549 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
CPA6-203ENST00000518549 NCOA2Q15596 1464 aa20.67■□□□□ 0.9
CPA6-203ENST00000518549 CDC42BPAQ5VT25 1732 aa20.65■□□□□ 0.9
CPA6-203ENST00000518549 PREX2Q70Z35 1606 aa20.65■□□□□ 0.9
CPA6-203ENST00000518549 PLCH2O75038 1416 aa20.62■□□□□ 0.89
CPA6-203ENST00000518549 CDC42BPBQ9Y5S2 1711 aa20.62■□□□□ 0.89
CPA6-203ENST00000518549 TEX14Q8IWB6 1497 aa20.62■□□□□ 0.89
CPA6-203ENST00000518549 ARAP3Q8WWN8 1544 aa20.61■□□□□ 0.89
CPA6-203ENST00000518549 GPATCH8Q9UKJ3 1502 aaKnown RBP20.61■□□□□ 0.89
CPA6-203ENST00000518549 FANCAO15360 1455 aa20.59■□□□□ 0.89
CPA6-203ENST00000518549 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
CPA6-203ENST00000518549 ARHGAP5Q13017 1502 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms